RNA–Protein interactions for RNA: ENST00000477489.1

LDB3-206, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best)

Gene LDB3, Length 433 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-206ENST00000477489 STPG4Q8N801 248 aa4.74□□□□□ -1.65
LDB3-206ENST00000477489 SLC25A29Q8N8R3 303 aa4.74□□□□□ -1.65
LDB3-206ENST00000477489 OR11H2Q8NH07 326 aa4.74□□□□□ -1.65
LDB3-206ENST00000477489 ZNRF2Q8NHG8 242 aa4.74□□□□□ -1.65
LDB3-206ENST00000477489 RNF183Q96D59 192 aa4.74□□□□□ -1.65
LDB3-206ENST00000477489 KRTAP4-5Q9BYR2 181 aa4.74□□□□□ -1.65
LDB3-206ENST00000477489 UBE2D4Q9Y2X8 147 aa4.74□□□□□ -1.65
LDB3-206ENST00000477489 RYR3Q15413 4870 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 PRKDCP78527 4128 aaKnown RBP4.73□□□□□ -1.65
LDB3-206ENST00000477489 IGLV4-69A0A075B6H9 119 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 GAGE12BA1L429 117 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 GAGE7O76087 117 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 PRM2P04554 102 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 GAGE12FP0CL80 117 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 GAGE12GP0CL81 117 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 GAGE12IP0CL82 117 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 LINC00694P0DN24 101 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 NMUP48645 174 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 RPL39P62891 51 aaKnown RBP4.73□□□□□ -1.65
LDB3-206ENST00000477489 FHL2Q14192 279 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 SH2D6Q7Z4S9 175 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 FAM19A3Q7Z5A8 133 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 PLA2G2DQ9UNK4 145 aa4.73□□□□□ -1.65
LDB3-206ENST00000477489 KMT2CQ8NEZ4 4911 aaKnown RBP4.73□□□□□ -1.65
LDB3-206ENST00000477489 NBEAL2Q6ZNJ1 2754 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 NOTCH3Q9UM47 2321 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 TRBV25-1A0A075B6N4 114 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 TRAV26-1A0A087WT03 109 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 TINCRA0A1B0GVN0 87 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 IGHV4-30-4P0DP06 118 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 TIRAPP58753 221 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 DGAT2L7PQ6IED9 249 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 C2orf91Q6ZV80 131 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 SBSPONQ8IVN8 264 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 PRO0255Q9UI72 69 aa4.72□□□□□ -1.65
LDB3-206ENST00000477489 TRRAPQ9Y4A5 3859 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 IGLV5-45A0A087WSX0 123 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 MYMXA0A1B0GTQ4 84 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 A6NDN8 102 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 H3BRM9 83 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 PLA2G1BP04054 148 aaKnown RBP4.71□□□□□ -1.66
LDB3-206ENST00000477489 SPART-AS1P0CW21 52 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 BVES-AS1Q5T3Y7 98 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 PLEKHB2Q96CS7 222 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 TMEM101Q96IK0 257 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 TMEM243Q9BU79 118 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 CHAC1Q9BUX1 264 aa4.71□□□□□ -1.66
LDB3-206ENST00000477489 IGKV2D-26A0A0A0MRZ7 120 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 IGHV4-28A0A0C4DH34 117 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 TMEM223A0PJW6 202 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 GAGE12JA6NER3 117 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 H3BNG1 76 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 UBE2L6O14933 153 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 LEPROTO15243 131 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 CCL25O15444 150 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 ATP5G1P05496 136 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 HERVK_113P63121 156 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 GAGE1Q13065 139 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 GAGE4Q13068 117 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 GAGE5Q13069 117 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 DEFB135Q30KP9 77 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 GAGE13Q4V321 117 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 MPV17L2Q567V2 206 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 FAM222AQ5U5X8 452 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 PCP2Q8IVA1 136 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 Q8NAQ8 132 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 OR5A1Q8NGJ0 315 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 TM2D2Q9BX73 214 aa4.7□□□□□ -1.66
LDB3-206ENST00000477489 C11orf68Q9H3H3 251 aaKnown RBP4.7□□□□□ -1.66
LDB3-206ENST00000477489 TRBV6-8A0A0A6YYG3 113 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 DEFB130BP0DP73 79 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 DEFB130AP0DP74 79 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 ZNF22P17026 224 aaPredicted RBP4.69□□□□□ -1.66
LDB3-206ENST00000477489 LGALS3P17931 250 aaKnown RBP4.69□□□□□ -1.66
LDB3-206ENST00000477489 HINT1P49773 126 aaPredicted RBP4.69□□□□□ -1.66
LDB3-206ENST00000477489 UBE2D1P51668 147 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 KRTAP10-2P60368 255 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 DAD1P61803 113 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 TMEM170BQ5T4T1 132 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 AMMECR1LQ6DCA0 310 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 ATP6V0E2Q8NHE4 81 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 ORAOV1Q8WV07 137 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 PHLDA1Q8WV24 401 aaPredicted RBP4.69□□□□□ -1.66
LDB3-206ENST00000477489 FAM104AQ969W3 186 aa4.69□□□□□ -1.66
LDB3-206ENST00000477489 SPANXB1Q9NS25 103 aaPredicted RBP4.69□□□□□ -1.66
LDB3-206ENST00000477489 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.68□□□□□ -1.66
LDB3-206ENST00000477489 TRAV8-6A0A0B4J262 113 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 IGHV3-38A0A0C4DH36 116 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 IGHV1-58A0A0C4DH39 117 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 A0A1B0GUV1 79 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 IGKV2-29A2NJV5 120 aaPredicted RBP4.68□□□□□ -1.66
LDB3-206ENST00000477489 ZNF815PA8K554 130 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 J3QQQ9 107 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 EMP1P54849 157 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 BATFQ16520 125 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 NTM-AS1Q6ZSK4 140 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 Q6ZUT4 128 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 Q6ZVH6 145 aa4.68□□□□□ -1.66
LDB3-206ENST00000477489 GEMIN7Q9H840 131 aaKnown RBP4.68□□□□□ -1.66
LDB3-206ENST00000477489 CDC42SE2Q9NRR3 84 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms