RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 AMTP48728 403 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 CRYBA4P53673 196 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 SMAGPQ0VAQ4 97 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 C15orf53Q8NAA6 179 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 NEXN-AS1Q8NBZ9 246 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 HIST1H2BLQ99880 126 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 FAM30AQ9NZY2 134 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 HSPB8Q9UJY1 196 aa4.4□□□□□ -1.71
CLDN4-205ENST00000476494 IGHV1-24A0A0C4DH33 117 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 LOC105371267A0A1B0GV96 52 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 PAX4O43316 350 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 NUPR1O60356 82 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 NUDT3O95989 172 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 FABP4P15090 132 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 AKR1D1P51857 326 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 LINC00310P59036 64 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 UBE2D3P61077 147 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 UBE2D2P62837 147 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 GTSF1LQ9H1H1 148 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 LINC00588Q9Y4M8 146 aa4.39□□□□□ -1.71
CLDN4-205ENST00000476494 TRAV26-1A0A087WT03 109 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 GAGE12JA6NER3 117 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 F5H768 121 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 ATP5LO75964 103 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 LEPROTL1O95214 131 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 NPSP0C0P6 89 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 GAGE1Q13065 139 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 GAGE4Q13068 117 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 GAGE5Q13069 117 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 COTL1Q14019 142 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 MRPL23Q16540 153 aaKnown RBP4.38□□□□□ -1.71
CLDN4-205ENST00000476494 GAGE13Q4V321 117 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 PDZD11Q5EBL8 140 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 CYSLTR1Q9Y271 337 aa4.38□□□□□ -1.71
CLDN4-205ENST00000476494 LPAP08519 4548 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 IFITM10A6NMD0 228 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 H7C423 109 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 TSHBP01222 138 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 LINC00694P0DN24 101 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 GYPEP15421 78 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 GCSHP23434 173 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 PAPPA-AS1Q5QFB9 102 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 ERASQ7Z444 233 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 LINC00528Q8N1L1 170 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 FAM19A2Q8N3H0 131 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 C20orf203Q8NBC4 194 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 OR10D4PQ8NGN7 298 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 ATP6V0E2Q8NHE4 81 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 TOMM6Q96B49 74 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 TMEM141Q96I45 108 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 MAP1LC3CQ9BXW4 147 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 Q9H8V8 135 aa4.37□□□□□ -1.71
CLDN4-205ENST00000476494 C20orf202A1L168 122 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.36□□□□□ -1.71
CLDN4-205ENST00000476494 TIRAPP58753 221 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 PKIAP61925 76 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 PET117Q6UWS5 81 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 C2orf66Q6UXQ4 117 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 NEGR1Q7Z3B1 354 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 VSIG2Q96IQ7 327 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 SCGB3A1Q96QR1 104 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 TIMM17AQ99595 171 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 TIMM21Q9BVV7 248 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 PYGO1Q9Y3Y4 419 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 ICOSQ9Y6W8 199 aa4.36□□□□□ -1.71
CLDN4-205ENST00000476494 TRBV25-1A0A075B6N4 114 aa4.35□□□□□ -1.71
CLDN4-205ENST00000476494 A0A096LNJ9 63 aa4.35□□□□□ -1.71
CLDN4-205ENST00000476494 TRBV6-8A0A0A6YYG3 113 aa4.35□□□□□ -1.71
CLDN4-205ENST00000476494 HTN3P15516 51 aa4.35□□□□□ -1.71
CLDN4-205ENST00000476494 PMCHL1Q16048 86 aa4.35□□□□□ -1.71
CLDN4-205ENST00000476494 LCE2DQ5TA82 110 aaPredicted RBP4.35□□□□□ -1.71
CLDN4-205ENST00000476494 IFI27L1Q96BM0 104 aa4.35□□□□□ -1.71
CLDN4-205ENST00000476494 TMEM243Q9BU79 118 aa4.35□□□□□ -1.71
CLDN4-205ENST00000476494 SPANXA1Q9NS26 97 aa4.35□□□□□ -1.71
CLDN4-205ENST00000476494 Q9UF83 564 aa4.35□□□□□ -1.71
CLDN4-205ENST00000476494 CSDC2Q9Y534 153 aaKnown RBP4.35□□□□□ -1.71
CLDN4-205ENST00000476494 A0A087WTM6 91 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 TRAV12-1A0A0B4J245 112 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 IGHV3-38A0A0C4DH36 116 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 A0A0J9YY99 117 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 LOC100131303A0A0U1RQF7 123 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 IGIPA6NJ69 53 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 SYS1-DBNDD2H3BUS1 97 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 UBE2L6O14933 153 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 PRSS1P07477 247 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 C3orf79P0CE67 100 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 DNAH10OSP0CZ25 163 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 SMIM6P0DI80 62 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 ZNF25P17030 456 aaPredicted RBP4.34□□□□□ -1.71
CLDN4-205ENST00000476494 KRTDAPP60985 99 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 MRPS36P82909 103 aaKnown RBP4.34□□□□□ -1.71
CLDN4-205ENST00000476494 JOSD1Q15040 202 aaPredicted RBP4.34□□□□□ -1.71
CLDN4-205ENST00000476494 DGAT2L7PQ6IED9 249 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 Q6ZN92 141 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 MRPL52Q86TS9 123 aaKnown RBP4.34□□□□□ -1.71
CLDN4-205ENST00000476494 CHCHD7Q9BUK0 85 aa4.34□□□□□ -1.71
CLDN4-205ENST00000476494 A0A096LPF7 62 aa4.33□□□□□ -1.72
CLDN4-205ENST00000476494 SCGB1D1O95968 90 aa4.33□□□□□ -1.72
CLDN4-205ENST00000476494 TTC32Q5I0X7 151 aa4.33□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms