RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 STHQ8IWL8 128 aa11.6□□□□□ -0.55
VARS2-207ENST00000476162 LINC00467Q9BRT7 94 aa11.6□□□□□ -0.55
VARS2-207ENST00000476162 TMEM126AQ9H061 195 aa11.6□□□□□ -0.55
VARS2-207ENST00000476162 C16orf95Q9H693 158 aa11.6□□□□□ -0.55
VARS2-207ENST00000476162 EDA2RQ9HAV5 297 aa11.6□□□□□ -0.55
VARS2-207ENST00000476162 Q9UF83 564 aa11.6□□□□□ -0.55
VARS2-207ENST00000476162 PIK3CD-AS1Q5SR53 167 aa11.6□□□□□ -0.55
VARS2-207ENST00000476162 SCGB1D4Q6XE38 83 aa11.59□□□□□ -0.55
VARS2-207ENST00000476162 ZNRF2Q8NHG8 242 aa11.59□□□□□ -0.55
VARS2-207ENST00000476162 CFC1BP0CG36 223 aa11.59□□□□□ -0.55
VARS2-207ENST00000476162 CFC1P0CG37 223 aa11.59□□□□□ -0.55
VARS2-207ENST00000476162 C10orf126Q8N4M7 172 aa11.59□□□□□ -0.55
VARS2-207ENST00000476162 ANK3Q12955 4377 aaKnown RBP11.59□□□□□ -0.55
VARS2-207ENST00000476162 NACAE9PAV3 2078 aa11.58□□□□□ -0.56
VARS2-207ENST00000476162 IGHV3OR16-12A0A075B7B8 117 aa11.58□□□□□ -0.56
VARS2-207ENST00000476162 C9JAW5 83 aa11.58□□□□□ -0.56
VARS2-207ENST00000476162 TMEM170BQ5T4T1 132 aa11.58□□□□□ -0.56
VARS2-207ENST00000476162 C15orf53Q8NAA6 179 aa11.58□□□□□ -0.56
VARS2-207ENST00000476162 C1orf158Q8N1D5 194 aa11.57□□□□□ -0.56
VARS2-207ENST00000476162 SPXQ9BT56 116 aa11.57□□□□□ -0.56
VARS2-207ENST00000476162 NIPBLQ6KC79 2804 aaeCLIP11.57□□□□□ -0.56
VARS2-207ENST00000476162 HERVK_113P61574 105 aa11.56□□□□□ -0.56
VARS2-207ENST00000476162 BEAN1Q3B7T3 259 aa11.56□□□□□ -0.56
VARS2-207ENST00000476162 SMR3AQ99954 134 aa11.56□□□□□ -0.56
VARS2-207ENST00000476162 IGLV4-3A0A075B6K6 122 aa11.55□□□□□ -0.56
VARS2-207ENST00000476162 NTN5Q8WTR8 489 aaPredicted RBP11.55□□□□□ -0.56
VARS2-207ENST00000476162 FASNP49327 2511 aaKnown RBP11.55□□□□□ -0.56
VARS2-207ENST00000476162 A0A0J9YY99 117 aa11.55□□□□□ -0.56
VARS2-207ENST00000476162 HILS1P60008 231 aa11.55□□□□□ -0.56
VARS2-207ENST00000476162 LINC01600Q96MT4 127 aa11.55□□□□□ -0.56
VARS2-207ENST00000476162 PRO1854Q9UHT4 67 aa11.55□□□□□ -0.56
VARS2-207ENST00000476162 TRAV8-4A0A0B4J246 113 aa11.54□□□□□ -0.56
VARS2-207ENST00000476162 IGHV3-53P01767 116 aa11.54□□□□□ -0.56
VARS2-207ENST00000476162 IGHV3-30P01768 117 aa11.54□□□□□ -0.56
VARS2-207ENST00000476162 IGHV3-30-5P0DP03 117 aa11.54□□□□□ -0.56
VARS2-207ENST00000476162 RS1O15537 224 aa11.53□□□□□ -0.56
VARS2-207ENST00000476162 RPL13AP40429 203 aaKnown RBP11.53□□□□□ -0.56
VARS2-207ENST00000476162 TSPEAR-AS2P59090 65 aa11.53□□□□□ -0.56
VARS2-207ENST00000476162 CSDC2Q9Y534 153 aaKnown RBP11.53□□□□□ -0.56
VARS2-207ENST00000476162 ADARB2-AS1A8MUL3 147 aa11.52□□□□□ -0.57
VARS2-207ENST00000476162 MRPL23Q16540 153 aaKnown RBP11.52□□□□□ -0.57
VARS2-207ENST00000476162 C5orf47Q569G3 176 aa11.52□□□□□ -0.57
VARS2-207ENST00000476162 CEMP1Q6PRD7 247 aaPredicted RBP11.52□□□□□ -0.57
VARS2-207ENST00000476162 FAM104AQ969W3 186 aa11.52□□□□□ -0.57
VARS2-207ENST00000476162 PYGO1Q9Y3Y4 419 aa11.52□□□□□ -0.57
VARS2-207ENST00000476162 C3orf56Q8N813 242 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 CHCHD5Q9BSY4 110 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 WFDC10AQ9H1F0 79 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 JMJD1CQ15652 2540 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 TRGV1A0A0A0MS02 117 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 IGHV3-38A0A0C4DH36 116 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 A0A0J9YXV3 536 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 TEX49A0A1B0GTD5 131 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 CHCHD7Q9BUK0 85 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 HIVEP2P31629 2446 aa11.51□□□□□ -0.57
VARS2-207ENST00000476162 NOTCH3Q9UM47 2321 aa11.5□□□□□ -0.57
VARS2-207ENST00000476162 SETXQ7Z333 2677 aaKnown RBP11.5□□□□□ -0.57
VARS2-207ENST00000476162 IGLV1-51P01701 117 aa11.5□□□□□ -0.57
VARS2-207ENST00000476162 IL17DQ8TAD2 202 aa11.5□□□□□ -0.57
VARS2-207ENST00000476162 DNAJC30Q96LL9 226 aa11.5□□□□□ -0.57
VARS2-207ENST00000476162 TMEM223A0PJW6 202 aa11.5□□□□□ -0.57
VARS2-207ENST00000476162 SLC25A29Q8N8R3 303 aa11.5□□□□□ -0.57
VARS2-207ENST00000476162 J3QQQ9 107 aa11.49□□□□□ -0.57
VARS2-207ENST00000476162 GIG44P09565 113 aaPredicted RBP11.49□□□□□ -0.57
VARS2-207ENST00000476162 ZNF22P17026 224 aaPredicted RBP11.49□□□□□ -0.57
VARS2-207ENST00000476162 NDUFA7O95182 113 aa11.48□□□□□ -0.57
VARS2-207ENST00000476162 IGHV3-33P01772 117 aa11.48□□□□□ -0.57
VARS2-207ENST00000476162 CMC4P56277 68 aaPredicted RBP11.48□□□□□ -0.57
VARS2-207ENST00000476162 RNASE13Q5GAN3 156 aaKnown RBP11.48□□□□□ -0.57
VARS2-207ENST00000476162 AMELXQ99217 191 aa11.48□□□□□ -0.57
VARS2-207ENST00000476162 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.48□□□□□ -0.57
VARS2-207ENST00000476162 IGKV2-29A2NJV5 120 aaPredicted RBP11.48□□□□□ -0.57
VARS2-207ENST00000476162 LINC00694P0DN24 101 aa11.48□□□□□ -0.57
VARS2-207ENST00000476162 LINC01620Q4KN68 170 aa11.48□□□□□ -0.57
VARS2-207ENST00000476162 C19orf73Q9NVV2 129 aa11.48□□□□□ -0.57
VARS2-207ENST00000476162 IGHV3-64A0A075B6Q5 118 aa11.47□□□□□ -0.57
VARS2-207ENST00000476162 EIF4EBP3O60516 100 aaPredicted RBP11.47□□□□□ -0.57
VARS2-207ENST00000476162 LGALS3P17931 250 aaKnown RBP11.47□□□□□ -0.57
VARS2-207ENST00000476162 Q6ZTI0 123 aa11.47□□□□□ -0.57
VARS2-207ENST00000476162 TMEM263Q8WUH6 116 aaKnown RBP11.47□□□□□ -0.57
VARS2-207ENST00000476162 UBE2D4Q9Y2X8 147 aa11.47□□□□□ -0.57
VARS2-207ENST00000476162 HECTD1Q9ULT8 2610 aa11.47□□□□□ -0.57
VARS2-207ENST00000476162 RPL35AP18077 110 aaKnown RBP11.47□□□□□ -0.57
VARS2-207ENST00000476162 GCN1Q92616 2671 aaKnown RBP11.47□□□□□ -0.57
VARS2-207ENST00000476162 LEPROTO15243 131 aa11.46□□□□□ -0.57
VARS2-207ENST00000476162 ATXN8Q156A1 80 aa11.46□□□□□ -0.57
VARS2-207ENST00000476162 TRBV10-2A0A0K0K1G8 114 aa11.45□□□□□ -0.58
VARS2-207ENST00000476162 UBE2WQ96B02 151 aa11.45□□□□□ -0.58
VARS2-207ENST00000476162 TRBV7-7A0A0K0K1E9 115 aa11.45□□□□□ -0.58
VARS2-207ENST00000476162 KRTAP10-3P60369 221 aa11.45□□□□□ -0.58
VARS2-207ENST00000476162 MRPS36P82909 103 aaKnown RBP11.45□□□□□ -0.58
VARS2-207ENST00000476162 NOP10Q9NPE3 64 aaKnown RBP11.45□□□□□ -0.58
VARS2-207ENST00000476162 NOTCH2Q04721 2471 aa11.45□□□□□ -0.58
VARS2-207ENST00000476162 LY6G6DO95868 133 aa11.44□□□□□ -0.58
VARS2-207ENST00000476162 A4D1N5 150 aa11.44□□□□□ -0.58
VARS2-207ENST00000476162 A0A0B4J2C4 111 aa11.42□□□□□ -0.58
VARS2-207ENST00000476162 LOC107984640A0A0U1RRK4 108 aa11.42□□□□□ -0.58
VARS2-207ENST00000476162 SMIM9A6NGZ8 99 aa11.42□□□□□ -0.58
VARS2-207ENST00000476162 FAM240AA0A1B0GVK7 77 aa11.41□□□□□ -0.58
VARS2-207ENST00000476162 PLAC8L1A1L4L8 177 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.9 ms