RNA–Protein interactions for RNA: ENST00000475639.5

U2AF1-209, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best)

Gene U2AF1, Length 4,694 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-209ENST00000475639 UBE2D2P62837 147 aa8.78□□□□□ -1
U2AF1-209ENST00000475639 RPL39P62891 51 aaKnown RBP8.78□□□□□ -1
U2AF1-209ENST00000475639 DEFB112Q30KQ8 113 aa8.78□□□□□ -1
U2AF1-209ENST00000475639 PRR30Q53SZ7 412 aaPredicted RBP8.78□□□□□ -1
U2AF1-209ENST00000475639 C11orf86A6NJI1 115 aa8.78□□□□□ -1
U2AF1-209ENST00000475639 PIP4P1Q86T03 277 aa8.77□□□□□ -1
U2AF1-209ENST00000475639 K7ENP7 123 aa8.77□□□□□ -1.01
U2AF1-209ENST00000475639 JMJD1CQ15652 2540 aa8.77□□□□□ -1.01
U2AF1-209ENST00000475639 CENPVL3A0A0U1RRI6 287 aa8.77□□□□□ -1.01
U2AF1-209ENST00000475639 DEFB136Q30KP8 78 aa8.77□□□□□ -1.01
U2AF1-209ENST00000475639 SBSPONQ8IVN8 264 aa8.77□□□□□ -1.01
U2AF1-209ENST00000475639 RNF185Q96GF1 192 aa8.77□□□□□ -1.01
U2AF1-209ENST00000475639 PRO0255Q9UI72 69 aa8.77□□□□□ -1.01
U2AF1-209ENST00000475639 SMG1Q96Q15 3661 aaKnown RBP8.76□□□□□ -1.01
U2AF1-209ENST00000475639 IGKV2-24A0A0C4DH68 120 aa8.76□□□□□ -1.01
U2AF1-209ENST00000475639 TRBV10-1A0A0K0K1A3 114 aa8.76□□□□□ -1.01
U2AF1-209ENST00000475639 NDUFC1O43677 76 aa8.76□□□□□ -1.01
U2AF1-209ENST00000475639 TCL1BO95988 128 aa8.76□□□□□ -1.01
U2AF1-209ENST00000475639 IGKV1-17P01599 117 aa8.76□□□□□ -1.01
U2AF1-209ENST00000475639 LY6G6EA0A0G2JKS1 128 aa8.76□□□□□ -1.01
U2AF1-209ENST00000475639 SPRY4Q9C004 299 aa8.76□□□□□ -1.01
U2AF1-209ENST00000475639 U3KQA8 63 aa8.76□□□□□ -1.01
U2AF1-209ENST00000475639 UBE2D1P51668 147 aa8.75□□□□□ -1.01
U2AF1-209ENST00000475639 C20orf203Q8NBC4 194 aa8.75□□□□□ -1.01
U2AF1-209ENST00000475639 ZFYVE26Q68DK2 2539 aa8.75□□□□□ -1.01
U2AF1-209ENST00000475639 ATP5EP56381 51 aaPredicted RBP8.75□□□□□ -1.01
U2AF1-209ENST00000475639 IGLC6P0CF74 106 aa8.75□□□□□ -1.01
U2AF1-209ENST00000475639 SPRNQ5BIV9 151 aa8.75□□□□□ -1.01
U2AF1-209ENST00000475639 Q8N9W7 124 aa8.75□□□□□ -1.01
U2AF1-209ENST00000475639 PPDPFQ9H3Y8 114 aa8.75□□□□□ -1.01
U2AF1-209ENST00000475639 MED14OSP0DP75 135 aa8.74□□□□□ -1.01
U2AF1-209ENST00000475639 FAM19A3Q7Z5A8 133 aa8.74□□□□□ -1.01
U2AF1-209ENST00000475639 KALRNO60229 2985 aa8.74□□□□□ -1.01
U2AF1-209ENST00000475639 SLURP1P55000 103 aa8.74□□□□□ -1.01
U2AF1-209ENST00000475639 LYRM9A8MSI8 78 aa8.74□□□□□ -1.01
U2AF1-209ENST00000475639 IL17DQ8TAD2 202 aa8.74□□□□□ -1.01
U2AF1-209ENST00000475639 CTSZQ9UBR2 303 aa8.74□□□□□ -1.01
U2AF1-209ENST00000475639 IGLV1-44P01699 117 aa8.73□□□□□ -1.01
U2AF1-209ENST00000475639 ZNF575Q86XF7 245 aa8.73□□□□□ -1.01
U2AF1-209ENST00000475639 IGFL3Q6UXB1 125 aa8.73□□□□□ -1.01
U2AF1-209ENST00000475639 NDUFA11Q86Y39 141 aa8.73□□□□□ -1.01
U2AF1-209ENST00000475639 TOMM6Q96B49 74 aa8.73□□□□□ -1.01
U2AF1-209ENST00000475639 SPENQ96T58 3664 aaKnown RBP8.73□□□□□ -1.01
U2AF1-209ENST00000475639 IGLV2-18A0A075B6J9 118 aa8.73□□□□□ -1.01
U2AF1-209ENST00000475639 TEX49A0A1B0GTD5 131 aa8.73□□□□□ -1.01
U2AF1-209ENST00000475639 SMAD5-AS1Q9Y6J3 95 aa8.72□□□□□ -1.01
U2AF1-209ENST00000475639 IGHV4-30-2A0A087WSY4 118 aa8.72□□□□□ -1.01
U2AF1-209ENST00000475639 K7EMT4 169 aa8.72□□□□□ -1.01
U2AF1-209ENST00000475639 CTSGP08311 255 aa8.72□□□□□ -1.01
U2AF1-209ENST00000475639 WT1P19544 449 aaPredicted RBP8.72□□□□□ -1.01
U2AF1-209ENST00000475639 K7EIM0 57 aa8.72□□□□□ -1.01
U2AF1-209ENST00000475639 MIAQ16674 131 aa8.72□□□□□ -1.01
U2AF1-209ENST00000475639 SDIM1Q6ZPB5 146 aa8.72□□□□□ -1.01
U2AF1-209ENST00000475639 DEFB135Q30KP9 77 aa8.71□□□□□ -1.01
U2AF1-209ENST00000475639 C10orf105Q8TEF2 133 aa8.71□□□□□ -1.01
U2AF1-209ENST00000475639 IGHV7-81A0A0B4J1V7 117 aa8.71□□□□□ -1.01
U2AF1-209ENST00000475639 WFDC11Q8NEX6 87 aa8.71□□□□□ -1.01
U2AF1-209ENST00000475639 ASPMQ8IZT6 3477 aa8.71□□□□□ -1.02
U2AF1-209ENST00000475639 A0A087WZ39 114 aa8.71□□□□□ -1.02
U2AF1-209ENST00000475639 C20orf173Q96LM9 149 aa8.71□□□□□ -1.02
U2AF1-209ENST00000475639 M0QXV9 152 aa8.71□□□□□ -1.02
U2AF1-209ENST00000475639 Q6Q795 121 aa8.71□□□□□ -1.02
U2AF1-209ENST00000475639 IGLV11-55A0A075B6I3 123 aa8.7□□□□□ -1.02
U2AF1-209ENST00000475639 BLCAPP62952 87 aa8.7□□□□□ -1.02
U2AF1-209ENST00000475639 MRGPRG-AS1Q2M3A8 158 aa8.7□□□□□ -1.02
U2AF1-209ENST00000475639 LRCOL1A6NCL2 159 aa8.7□□□□□ -1.02
U2AF1-209ENST00000475639 ENHOQ6UWT2 76 aa8.7□□□□□ -1.02
U2AF1-209ENST00000475639 SCXQ7RTU7 201 aa8.7□□□□□ -1.02
U2AF1-209ENST00000475639 FAM19A1Q7Z5A9 133 aa8.7□□□□□ -1.02
U2AF1-209ENST00000475639 WFDC10BQ8IUB3 73 aa8.7□□□□□ -1.02
U2AF1-209ENST00000475639 NCOR2Q9Y618 2525 aa8.7□□□□□ -1.02
U2AF1-209ENST00000475639 I3L2K1 104 aa8.69□□□□□ -1.02
U2AF1-209ENST00000475639 ZNF80P51504 273 aaPredicted RBP8.69□□□□□ -1.02
U2AF1-209ENST00000475639 PIEZO1Q92508 2521 aa8.69□□□□□ -1.02
U2AF1-209ENST00000475639 ZZEF1O43149 2961 aa8.69□□□□□ -1.02
U2AF1-209ENST00000475639 CRIP2P52943 208 aaPredicted RBP8.69□□□□□ -1.02
U2AF1-209ENST00000475639 RAI1Q7Z5J4 1906 aaPredicted RBP8.69□□□□□ -1.02
U2AF1-209ENST00000475639 C1orf195Q5TG92 126 aa8.69□□□□□ -1.02
U2AF1-209ENST00000475639 CCKP06307 115 aa8.69□□□□□ -1.02
U2AF1-209ENST00000475639 PRSS33Q8NF86 280 aa8.69□□□□□ -1.02
U2AF1-209ENST00000475639 ODF3Q96PU9 254 aa8.69□□□□□ -1.02
U2AF1-209ENST00000475639 PSMG3-AS1Q96PY0 264 aa8.69□□□□□ -1.02
U2AF1-209ENST00000475639 LINC00574Q9H8X3 128 aa8.69□□□□□ -1.02
U2AF1-209ENST00000475639 TIMM17BO60830 172 aa8.68□□□□□ -1.02
U2AF1-209ENST00000475639 MSMPQ1L6U9 139 aa8.68□□□□□ -1.02
U2AF1-209ENST00000475639 TLN1Q9Y490 2541 aaKnown RBP8.68□□□□□ -1.02
U2AF1-209ENST00000475639 MDFICQ9P1T7 246 aa8.68□□□□□ -1.02
U2AF1-209ENST00000475639 SERP2Q8N6R1 65 aa8.68□□□□□ -1.02
U2AF1-209ENST00000475639 CNFNQ9BYD5 112 aa8.68□□□□□ -1.02
U2AF1-209ENST00000475639 TMEM263Q8WUH6 116 aaKnown RBP8.68□□□□□ -1.02
U2AF1-209ENST00000475639 MRPS12O15235 138 aaKnown RBP8.67□□□□□ -1.02
U2AF1-209ENST00000475639 C1orf158Q8N1D5 194 aa8.67□□□□□ -1.02
U2AF1-209ENST00000475639 A0A0J9YXY3 114 aa8.66□□□□□ -1.02
U2AF1-209ENST00000475639 COX8CQ7Z4L0 72 aa8.66□□□□□ -1.02
U2AF1-209ENST00000475639 C9orf85Q96MD7 179 aa8.66□□□□□ -1.02
U2AF1-209ENST00000475639 PRAC2D3DTV9 90 aa8.66□□□□□ -1.02
U2AF1-209ENST00000475639 DEFB4AO15263 64 aa8.66□□□□□ -1.02
U2AF1-209ENST00000475639 PKD1L2Q7Z442 2459 aa8.66□□□□□ -1.02
U2AF1-209ENST00000475639 ZFAND3Q9H8U3 227 aa8.66□□□□□ -1.02
U2AF1-209ENST00000475639 SPINK6Q6UWN8 80 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 109 ms