RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 CD164L2Q6UWJ8 174 aa12.52□□□□□ -0.41
VPS36-203ENST00000475375 PDE6DO43924 150 aa12.51□□□□□ -0.41
VPS36-203ENST00000475375 FOXA3P55318 350 aaPredicted RBP12.51□□□□□ -0.41
VPS36-203ENST00000475375 EIF5AL1Q6IS14 154 aaKnown RBP12.51□□□□□ -0.41
VPS36-203ENST00000475375 MRAP2Q96G30 205 aa12.51□□□□□ -0.41
VPS36-203ENST00000475375 RPP21Q9H633 154 aaKnown RBP12.51□□□□□ -0.41
VPS36-203ENST00000475375 TEX46H3BTG2 121 aa12.5□□□□□ -0.41
VPS36-203ENST00000475375 MEF2BQ02080 365 aaPredicted RBP12.5□□□□□ -0.41
VPS36-203ENST00000475375 C9orf116Q5BN46 136 aaPredicted RBP12.5□□□□□ -0.41
VPS36-203ENST00000475375 PRR26Q8N8Z3 221 aa12.5□□□□□ -0.41
VPS36-203ENST00000475375 RPL18AQ02543 176 aaKnown RBP12.49□□□□□ -0.41
VPS36-203ENST00000475375 CAMK2N2Q96S95 79 aa12.49□□□□□ -0.41
VPS36-203ENST00000475375 RNASE7Q9H1E1 156 aaKnown RBP12.49□□□□□ -0.41
VPS36-203ENST00000475375 TMEM242Q9NWH2 141 aa12.49□□□□□ -0.41
VPS36-203ENST00000475375 TRAV1-1A0A0B4J248 108 aa12.48□□□□□ -0.41
VPS36-203ENST00000475375 APOMO95445 188 aa12.48□□□□□ -0.41
VPS36-203ENST00000475375 COX7A2LO14548 114 aa12.47□□□□□ -0.41
VPS36-203ENST00000475375 TSHBP01222 138 aa12.47□□□□□ -0.41
VPS36-203ENST00000475375 PHF5AQ7RTV0 110 aaKnown RBP12.47□□□□□ -0.41
VPS36-203ENST00000475375 NUP35Q8NFH5 326 aa12.47□□□□□ -0.41
VPS36-203ENST00000475375 DIRC1Q969H9 104 aa12.47□□□□□ -0.41
VPS36-203ENST00000475375 CDC42SE2Q9NRR3 84 aa12.47□□□□□ -0.41
VPS36-203ENST00000475375 ESDP10768 282 aa12.46□□□□□ -0.41
VPS36-203ENST00000475375 ST20Q9HBF5 79 aa12.46□□□□□ -0.41
VPS36-203ENST00000475375 HMSDA8MTL9 139 aa12.45□□□□□ -0.42
VPS36-203ENST00000475375 TRBV6-5A0A0K0K1A5 114 aa12.44□□□□□ -0.42
VPS36-203ENST00000475375 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.44□□□□□ -0.42
VPS36-203ENST00000475375 MRPL52Q86TS9 123 aaKnown RBP12.44□□□□□ -0.42
VPS36-203ENST00000475375 C1orf196B1AJZ1 125 aa12.43□□□□□ -0.42
VPS36-203ENST00000475375 OPRPNQ99935 248 aaPredicted RBP12.43□□□□□ -0.42
VPS36-203ENST00000475375 C7orf77A4D0Y5 90 aa12.42□□□□□ -0.42
VPS36-203ENST00000475375 K7EN84 100 aa12.42□□□□□ -0.42
VPS36-203ENST00000475375 IGLV7-43P04211 117 aa12.42□□□□□ -0.42
VPS36-203ENST00000475375 PRR4Q16378 134 aa12.42□□□□□ -0.42
VPS36-203ENST00000475375 A0A087WZ39 114 aa12.41□□□□□ -0.42
VPS36-203ENST00000475375 OCC1Q8TAD7 63 aa12.41□□□□□ -0.42
VPS36-203ENST00000475375 C2orf48Q96LS8 159 aa12.41□□□□□ -0.42
VPS36-203ENST00000475375 TRAV13-1A0A0B4J241 112 aa12.4□□□□□ -0.42
VPS36-203ENST00000475375 RGS21Q2M5E4 152 aa12.4□□□□□ -0.42
VPS36-203ENST00000475375 RNASE13Q5GAN3 156 aaKnown RBP12.4□□□□□ -0.42
VPS36-203ENST00000475375 C5orf38Q86SI9 138 aa12.4□□□□□ -0.42
VPS36-203ENST00000475375 FAM210AQ96ND0 272 aa12.4□□□□□ -0.42
VPS36-203ENST00000475375 MUC2Q02817 5179 aa12.4□□□□□ -0.42
VPS36-203ENST00000475375 A0A0U1RQV1 116 aa12.39□□□□□ -0.43
VPS36-203ENST00000475375 H0Y9J4 135 aa12.39□□□□□ -0.43
VPS36-203ENST00000475375 FCER1GP30273 86 aa12.39□□□□□ -0.43
VPS36-203ENST00000475375 GATCO43716 136 aaKnown RBP12.38□□□□□ -0.43
VPS36-203ENST00000475375 SPAG11BQ08648 103 aa12.38□□□□□ -0.43
VPS36-203ENST00000475375 BORCS7Q96B45 105 aa12.38□□□□□ -0.43
VPS36-203ENST00000475375 IGLV1-50A0A075B6I6 118 aa12.37□□□□□ -0.43
VPS36-203ENST00000475375 TSKUQ8WUA8 353 aa12.37□□□□□ -0.43
VPS36-203ENST00000475375 KRTAP9-2Q9BYQ4 174 aa12.37□□□□□ -0.43
VPS36-203ENST00000475375 BATF3Q9NR55 127 aa12.37□□□□□ -0.43
VPS36-203ENST00000475375 TRBV27A0A0K0K1C4 114 aa12.36□□□□□ -0.43
VPS36-203ENST00000475375 A8MWL6 223 aa12.36□□□□□ -0.43
VPS36-203ENST00000475375 UBE2D1P51668 147 aa12.36□□□□□ -0.43
VPS36-203ENST00000475375 POLR2KP53803 58 aaKnown RBP12.36□□□□□ -0.43
VPS36-203ENST00000475375 SMAGPQ0VAQ4 97 aa12.36□□□□□ -0.43
VPS36-203ENST00000475375 RNF151Q2KHN1 245 aa12.35□□□□□ -0.43
VPS36-203ENST00000475375 FAM168BA1KXE4 195 aa12.34□□□□□ -0.43
VPS36-203ENST00000475375 FAM19A5Q7Z5A7 132 aaPredicted RBP12.34□□□□□ -0.43
VPS36-203ENST00000475375 TAGLN2P37802 199 aaKnown RBP12.33□□□□□ -0.44
VPS36-203ENST00000475375 KRTAP11-1Q8IUC1 163 aa12.33□□□□□ -0.44
VPS36-203ENST00000475375 IMMP2LQ96T52 175 aa12.33□□□□□ -0.44
VPS36-203ENST00000475375 UBE2D4Q9Y2X8 147 aa12.33□□□□□ -0.44
VPS36-203ENST00000475375 VCYO14598 125 aa12.32□□□□□ -0.44
VPS36-203ENST00000475375 OR10D4PQ8NGN7 298 aa12.32□□□□□ -0.44
VPS36-203ENST00000475375 ORAOV1Q8WV07 137 aa12.32□□□□□ -0.44
VPS36-203ENST00000475375 CSDC2Q9Y534 153 aaKnown RBP12.32□□□□□ -0.44
VPS36-203ENST00000475375 A0A1B0GUT8 65 aa12.31□□□□□ -0.44
VPS36-203ENST00000475375 RAB4AP20338 218 aa12.31□□□□□ -0.44
VPS36-203ENST00000475375 Q6ZUT4 128 aa12.31□□□□□ -0.44
VPS36-203ENST00000475375 TMEM191AQ9H0A3 160 aa12.31□□□□□ -0.44
VPS36-203ENST00000475375 SMKR1H3BMG3 65 aa12.3□□□□□ -0.44
VPS36-203ENST00000475375 FAM231DQ6ZW35 169 aa12.3□□□□□ -0.44
VPS36-203ENST00000475375 AMN1Q8IY45 258 aa12.3□□□□□ -0.44
VPS36-203ENST00000475375 MRPL35Q9NZE8 188 aaKnown RBP12.3□□□□□ -0.44
VPS36-203ENST00000475375 NDUFA1O15239 70 aa12.29□□□□□ -0.44
VPS36-203ENST00000475375 KRTAP1-4P0C5Y4 121 aa12.29□□□□□ -0.44
VPS36-203ENST00000475375 RPL13AP40429 203 aaKnown RBP12.29□□□□□ -0.44
VPS36-203ENST00000475375 UBE2BP63146 152 aa12.29□□□□□ -0.44
VPS36-203ENST00000475375 GAGE2EQ4V326 116 aa12.29□□□□□ -0.44
VPS36-203ENST00000475375 KIR2DL4Q99706 377 aa12.29□□□□□ -0.44
VPS36-203ENST00000475375 GAGE2DQ9UEU5 116 aa12.29□□□□□ -0.44
VPS36-203ENST00000475375 HIGD1CA8MV81 97 aa12.28□□□□□ -0.44
VPS36-203ENST00000475375 CT83Q5H943 113 aa12.28□□□□□ -0.44
VPS36-203ENST00000475375 CEBPGP53567 150 aa12.27□□□□□ -0.45
VPS36-203ENST00000475375 TMEM18Q96B42 140 aa12.27□□□□□ -0.45
VPS36-203ENST00000475375 F8WDY8 70 aa12.26□□□□□ -0.45
VPS36-203ENST00000475375 M0QXV9 152 aa12.26□□□□□ -0.45
VPS36-203ENST00000475375 SUMO2P61956 95 aaKnown RBP12.26□□□□□ -0.45
VPS36-203ENST00000475375 C10orf25Q5T742 122 aa12.26□□□□□ -0.45
VPS36-203ENST00000475375 PPP1R17O96001 155 aa12.25□□□□□ -0.45
VPS36-203ENST00000475375 UNQ6190/PRO20217Q6UXQ8 127 aa12.25□□□□□ -0.45
VPS36-203ENST00000475375 TMEM241Q24JQ0 296 aa12.24□□□□□ -0.45
VPS36-203ENST00000475375 TIMM21Q9BVV7 248 aa12.24□□□□□ -0.45
VPS36-203ENST00000475375 C6orf48Q9UBA6 75 aa12.24□□□□□ -0.45
VPS36-203ENST00000475375 TMEM250H0YL14 139 aa12.23□□□□□ -0.45
VPS36-203ENST00000475375 TLX1NBP0CAT3 122 aa12.23□□□□□ -0.45
VPS36-203ENST00000475375 NRACQ8N912 160 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 110.4 ms