RNA–Protein interactions for RNA: ENST00000474825.1

ATG4A-207, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-207ENST00000474825 NHLRC4P0CG21 123 aaPredicted RBP4.6□□□□□ -1.67
ATG4A-207ENST00000474825 TIRAPP58753 221 aa4.6□□□□□ -1.67
ATG4A-207ENST00000474825 MRPS36P82909 103 aaKnown RBP4.6□□□□□ -1.67
ATG4A-207ENST00000474825 SH2D6Q7Z4S9 175 aa4.6□□□□□ -1.67
ATG4A-207ENST00000474825 SCGB3A1Q96QR1 104 aa4.6□□□□□ -1.67
ATG4A-207ENST00000474825 C12orf57Q99622 126 aa4.6□□□□□ -1.67
ATG4A-207ENST00000474825 COL7A1Q02388 2944 aa4.6□□□□□ -1.67
ATG4A-207ENST00000474825 A0A087WX48 190 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 TRBV6-8A0A0A6YYG3 113 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 IGHV3-38A0A0C4DH36 116 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.59□□□□□ -1.67
ATG4A-207ENST00000474825 GYPEP15421 78 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 RPL39P62891 51 aaKnown RBP4.59□□□□□ -1.67
ATG4A-207ENST00000474825 ODF1Q14990 250 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 Q6ZTC4 211 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 ATP6V0E2Q8NHE4 81 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 C11orf45Q8TAV5 145 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 PHLDA1Q8WV24 401 aaPredicted RBP4.59□□□□□ -1.67
ATG4A-207ENST00000474825 BAALCQ8WXS3 180 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 AMELXQ99217 191 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 SPANXA1Q9NS26 97 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 UBE2D4Q9Y2X8 147 aa4.59□□□□□ -1.67
ATG4A-207ENST00000474825 IGLV4-3A0A075B6K6 122 aa4.58□□□□□ -1.68
ATG4A-207ENST00000474825 A0A096LPF7 62 aa4.58□□□□□ -1.68
ATG4A-207ENST00000474825 C20orf202A1L168 122 aa4.58□□□□□ -1.68
ATG4A-207ENST00000474825 F5H768 121 aa4.58□□□□□ -1.68
ATG4A-207ENST00000474825 SCGB1D1O95968 90 aa4.58□□□□□ -1.68
ATG4A-207ENST00000474825 MRPL23Q16540 153 aaKnown RBP4.58□□□□□ -1.68
ATG4A-207ENST00000474825 TRBV25-1A0A075B6N4 114 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 PRSS29PA6NIE9 313 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 PRSS1P07477 247 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 ZNF25P17030 456 aaPredicted RBP4.57□□□□□ -1.68
ATG4A-207ENST00000474825 SMAGPQ0VAQ4 97 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 PMVKQ15126 192 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 PAPPA-AS1Q5QFB9 102 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 Q6ZN92 141 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 FAM19A3Q7Z5A8 133 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 NFE4Q86UQ8 179 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 DEFB104AQ8WTQ1 72 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 TMEM243Q9BU79 118 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 CST9LQ9H4G1 147 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 ICOSQ9Y6W8 199 aa4.57□□□□□ -1.68
ATG4A-207ENST00000474825 STARD9Q9P2P6 4700 aa4.56□□□□□ -1.68
ATG4A-207ENST00000474825 IGLV4-69A0A075B6H9 119 aa4.56□□□□□ -1.68
ATG4A-207ENST00000474825 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-207ENST00000474825 TRAV9-2A0A087WT02 112 aa4.56□□□□□ -1.68
ATG4A-207ENST00000474825 DEFB131BA0A096LNP1 70 aa4.56□□□□□ -1.68
ATG4A-207ENST00000474825 TRAV10A0A0B4J240 114 aa4.56□□□□□ -1.68
ATG4A-207ENST00000474825 IGKV2-29A2NJV5 120 aaPredicted RBP4.56□□□□□ -1.68
ATG4A-207ENST00000474825 F8VRH5 84 aa4.56□□□□□ -1.68
ATG4A-207ENST00000474825 NANOS2P60321 138 aaKnown RBP4.56□□□□□ -1.68
ATG4A-207ENST00000474825 ZNF664Q8N3J9 261 aa4.56□□□□□ -1.68
ATG4A-207ENST00000474825 WWC2-AS2Q96NR7 200 aa4.56□□□□□ -1.68
ATG4A-207ENST00000474825 CDC42SE2Q9NRR3 84 aa4.56□□□□□ -1.68
ATG4A-207ENST00000474825 MRPL35Q9NZE8 188 aaKnown RBP4.56□□□□□ -1.68
ATG4A-207ENST00000474825 STAB2Q8WWQ8 2551 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 DNAH6Q9C0G6 4158 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 A0A0J9YY99 117 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 DPM2O94777 84 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 IGKCP01834 107 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 IGLC3P0DOY3 106 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 FGF6P10767 208 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 PLNP26678 52 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 LELP1Q5T871 98 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 LYPD5Q6UWN5 251 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 OPRPNQ99935 248 aaPredicted RBP4.55□□□□□ -1.68
ATG4A-207ENST00000474825 VAMP8Q9BV40 100 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 VCX2Q9H322 139 aa4.55□□□□□ -1.68
ATG4A-207ENST00000474825 CHTOPQ9Y3Y2 248 aaKnown RBP4.55□□□□□ -1.68
ATG4A-207ENST00000474825 LINC00587B1AMM8 73 aa4.54□□□□□ -1.68
ATG4A-207ENST00000474825 HTN3P15516 51 aa4.54□□□□□ -1.68
ATG4A-207ENST00000474825 UBE2D1P51668 147 aa4.54□□□□□ -1.68
ATG4A-207ENST00000474825 PKIAP61925 76 aa4.54□□□□□ -1.68
ATG4A-207ENST00000474825 CEMP1Q6PRD7 247 aaPredicted RBP4.54□□□□□ -1.68
ATG4A-207ENST00000474825 Q6ZUT4 128 aa4.54□□□□□ -1.68
ATG4A-207ENST00000474825 C15orf53Q8NAA6 179 aa4.54□□□□□ -1.68
ATG4A-207ENST00000474825 PMCHL2Q9BQD1 86 aa4.54□□□□□ -1.68
ATG4A-207ENST00000474825 IGLV5-45A0A087WSX0 123 aa4.53□□□□□ -1.68
ATG4A-207ENST00000474825 TINCRA0A1B0GVN0 87 aa4.53□□□□□ -1.68
ATG4A-207ENST00000474825 C11orf86A6NJI1 115 aa4.53□□□□□ -1.68
ATG4A-207ENST00000474825 MAJINQ3KP22 176 aa4.53□□□□□ -1.68
ATG4A-207ENST00000474825 ZC2HC1BQ5TFG8 222 aa4.53□□□□□ -1.68
ATG4A-207ENST00000474825 ATOH7Q8N100 152 aa4.53□□□□□ -1.68
ATG4A-207ENST00000474825 OR5A1Q8NGJ0 315 aa4.53□□□□□ -1.68
ATG4A-207ENST00000474825 CSMD3Q7Z407 3707 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 IGLV4-60A0A075B6I1 120 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 hDV102S1A0JD36 115 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 H0Y8G0 127 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 UBE2L6O14933 153 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 CCL25O15444 150 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 RBX1P62877 108 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 GAGE6Q13070 117 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 ESRGQ1W209 222 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 SPATA45Q537H7 98 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 ANKRD39Q53RE8 183 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 DGAT2L7PQ6IED9 249 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 TMEM101Q96IK0 257 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 CHCHD5Q9BSY4 110 aa4.52□□□□□ -1.69
ATG4A-207ENST00000474825 PAM16Q9Y3D7 125 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms