RNA–Protein interactions for RNA: ENST00000474642.1

RTN4R-206, Transcript of reticulon 4 receptor, humanhuman

TSL 4

Gene RTN4R, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-206ENST00000474642 TWIST1Q15672 202 aa8.32□□□□□ -1.08
RTN4R-206ENST00000474642 SPINK6Q6UWN8 80 aa8.32□□□□□ -1.08
RTN4R-206ENST00000474642 CHCHD5Q9BSY4 110 aa8.32□□□□□ -1.08
RTN4R-206ENST00000474642 TMEM191AQ9H0A3 160 aa8.32□□□□□ -1.08
RTN4R-206ENST00000474642 TRBV10-1A0A0K0K1A3 114 aa8.31□□□□□ -1.08
RTN4R-206ENST00000474642 SCO1O75880 301 aa8.31□□□□□ -1.08
RTN4R-206ENST00000474642 MRPL54Q6P161 138 aaKnown RBP8.31□□□□□ -1.08
RTN4R-206ENST00000474642 KRTAP26-1Q6PEX3 210 aa8.31□□□□□ -1.08
RTN4R-206ENST00000474642 AP1S3Q96PC3 154 aa8.31□□□□□ -1.08
RTN4R-206ENST00000474642 S100A8P05109 93 aa8.3□□□□□ -1.08
RTN4R-206ENST00000474642 TGIF2-C20orf24A0A0A6YYL0 155 aa8.29□□□□□ -1.08
RTN4R-206ENST00000474642 COLCA2A8K830 154 aa8.29□□□□□ -1.08
RTN4R-206ENST00000474642 SSTP61278 116 aa8.29□□□□□ -1.08
RTN4R-206ENST00000474642 MAJINQ3KP22 176 aa8.29□□□□□ -1.08
RTN4R-206ENST00000474642 COX19Q49B96 90 aa8.29□□□□□ -1.08
RTN4R-206ENST00000474642 TMEM136Q6ZRR5 245 aa8.29□□□□□ -1.08
RTN4R-206ENST00000474642 LINC00269Q8N2A0 174 aa8.29□□□□□ -1.08
RTN4R-206ENST00000474642 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.29□□□□□ -1.08
RTN4R-206ENST00000474642 PRR34Q9NV39 138 aa8.29□□□□□ -1.08
RTN4R-206ENST00000474642 IGLV10-54A0A075B6I4 117 aa8.28□□□□□ -1.08
RTN4R-206ENST00000474642 SLPIP03973 132 aa8.28□□□□□ -1.08
RTN4R-206ENST00000474642 RAB4AP20338 218 aa8.28□□□□□ -1.08
RTN4R-206ENST00000474642 CAMPP49913 170 aa8.28□□□□□ -1.08
RTN4R-206ENST00000474642 RAB4BP61018 213 aa8.28□□□□□ -1.08
RTN4R-206ENST00000474642 FAM104BQ5XKR9 115 aa8.28□□□□□ -1.08
RTN4R-206ENST00000474642 GNB1LQ9BYB4 327 aa8.28□□□□□ -1.08
RTN4R-206ENST00000474642 SMIM15Q7Z3B0 74 aa8.27□□□□□ -1.09
RTN4R-206ENST00000474642 AMN1Q8IY45 258 aa8.27□□□□□ -1.09
RTN4R-206ENST00000474642 IGKV2-24A0A0C4DH68 120 aa8.26□□□□□ -1.09
RTN4R-206ENST00000474642 SMIM17P0DL12 118 aa8.26□□□□□ -1.09
RTN4R-206ENST00000474642 RBX1P62877 108 aa8.26□□□□□ -1.09
RTN4R-206ENST00000474642 COX6A2Q02221 97 aa8.26□□□□□ -1.09
RTN4R-206ENST00000474642 GAGE6Q13070 117 aa8.26□□□□□ -1.09
RTN4R-206ENST00000474642 STPG4Q8N801 248 aa8.26□□□□□ -1.09
RTN4R-206ENST00000474642 M0QY20 66 aa8.25□□□□□ -1.09
RTN4R-206ENST00000474642 MT-ND6P03923 174 aa8.25□□□□□ -1.09
RTN4R-206ENST00000474642 MRPL51Q4U2R6 128 aaKnown RBP8.25□□□□□ -1.09
RTN4R-206ENST00000474642 H7C1H1 209 aa8.24□□□□□ -1.09
RTN4R-206ENST00000474642 REG3AQ06141 175 aa8.24□□□□□ -1.09
RTN4R-206ENST00000474642 SRSF9Q13242 221 aaKnown RBP eCLIP8.24□□□□□ -1.09
RTN4R-206ENST00000474642 SUMO4Q6EEV6 95 aa8.24□□□□□ -1.09
RTN4R-206ENST00000474642 NEXN-AS1Q8NBZ9 246 aa8.24□□□□□ -1.09
RTN4R-206ENST00000474642 MRAP2Q96G30 205 aa8.24□□□□□ -1.09
RTN4R-206ENST00000474642 MGPP08493 103 aa8.23□□□□□ -1.09
RTN4R-206ENST00000474642 ZNF56Q15929 161 aa8.23□□□□□ -1.09
RTN4R-206ENST00000474642 TMEM97Q5BJF2 176 aa8.23□□□□□ -1.09
RTN4R-206ENST00000474642 PRSS3P2Q8NHM4 247 aa8.23□□□□□ -1.09
RTN4R-206ENST00000474642 TRAV8-4A0A0B4J246 113 aa8.22□□□□□ -1.09
RTN4R-206ENST00000474642 TRBV6-5A0A0K0K1A5 114 aa8.22□□□□□ -1.09
RTN4R-206ENST00000474642 PPBPP02775 128 aa8.22□□□□□ -1.09
RTN4R-206ENST00000474642 RAB5AP20339 215 aa8.22□□□□□ -1.09
RTN4R-206ENST00000474642 RPS10P46783 165 aaKnown RBP8.22□□□□□ -1.09
RTN4R-206ENST00000474642 NTM-AS1Q6ZSK4 140 aa8.22□□□□□ -1.09
RTN4R-206ENST00000474642 NRACQ8N912 160 aa8.22□□□□□ -1.09
RTN4R-206ENST00000474642 MRPL18Q9H0U6 180 aaKnown RBP8.22□□□□□ -1.09
RTN4R-206ENST00000474642 TRBV25-1A0A075B6N4 114 aa8.21□□□□□ -1.1
RTN4R-206ENST00000474642 TRAV26-2A0A0B4J265 109 aa8.21□□□□□ -1.1
RTN4R-206ENST00000474642 F5H697 171 aa8.21□□□□□ -1.1
RTN4R-206ENST00000474642 APCSP02743 223 aa8.21□□□□□ -1.1
RTN4R-206ENST00000474642 Q6ZRP5 223 aa8.21□□□□□ -1.1
RTN4R-206ENST00000474642 NIT2Q9NQR4 276 aa8.21□□□□□ -1.1
RTN4R-206ENST00000474642 TRAPPC1Q9Y5R8 145 aa8.21□□□□□ -1.1
RTN4R-206ENST00000474642 PRSS47A8MTI9 375 aa8.2□□□□□ -1.1
RTN4R-206ENST00000474642 CFAP161Q6P656 301 aa8.2□□□□□ -1.1
RTN4R-206ENST00000474642 ORMDL3Q8N138 153 aa8.2□□□□□ -1.1
RTN4R-206ENST00000474642 LAMTOR2Q9Y2Q5 125 aa8.2□□□□□ -1.1
RTN4R-206ENST00000474642 D6R8Y8 96 aa8.19□□□□□ -1.1
RTN4R-206ENST00000474642 SMKR1H3BMG3 65 aa8.19□□□□□ -1.1
RTN4R-206ENST00000474642 PPP1R17O96001 155 aa8.19□□□□□ -1.1
RTN4R-206ENST00000474642 CKS2P33552 79 aa8.19□□□□□ -1.1
RTN4R-206ENST00000474642 RPL32P62910 135 aaKnown RBP8.19□□□□□ -1.1
RTN4R-206ENST00000474642 FABP9Q0Z7S8 132 aa8.19□□□□□ -1.1
RTN4R-206ENST00000474642 RPL39LQ96EH5 51 aaKnown RBP8.19□□□□□ -1.1
RTN4R-206ENST00000474642 ALKBH7Q9BT30 221 aaPredicted RBP8.19□□□□□ -1.1
RTN4R-206ENST00000474642 MUC2Q02817 5179 aa8.18□□□□□ -1.1
RTN4R-206ENST00000474642 NCR2O95944 276 aa8.18□□□□□ -1.1
RTN4R-206ENST00000474642 NPYP01303 97 aa8.18□□□□□ -1.1
RTN4R-206ENST00000474642 TRGC2P03986 189 aa8.18□□□□□ -1.1
RTN4R-206ENST00000474642 POLR2KP53803 58 aaKnown RBP8.18□□□□□ -1.1
RTN4R-206ENST00000474642 KIAA1644Q3SXP7 199 aa8.18□□□□□ -1.1
RTN4R-206ENST00000474642 C20orf78Q9BR46 151 aa8.18□□□□□ -1.1
RTN4R-206ENST00000474642 A0A096LNI7 61 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 IGHV1-24A0A0C4DH33 117 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 TNFRSF6BO95407 300 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 HIGD2BQ4VC39 106 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 ZNF664Q8N3J9 261 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 C15orf56Q8N910 161 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 C20orf203Q8NBC4 194 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 PRELID3AQ96N28 172 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 LINC00474Q9P2X8 69 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 PSORS1C2Q9UIG4 136 aa8.17□□□□□ -1.1
RTN4R-206ENST00000474642 TRBV27A0A0K0K1C4 114 aa8.16□□□□□ -1.1
RTN4R-206ENST00000474642 IQCJQ1A5X6 159 aa8.16□□□□□ -1.1
RTN4R-206ENST00000474642 LCE2AQ5TA79 106 aaPredicted RBP8.16□□□□□ -1.1
RTN4R-206ENST00000474642 IGLV4-60A0A075B6I1 120 aa8.15□□□□□ -1.1
RTN4R-206ENST00000474642 SUMO2P61956 95 aaKnown RBP8.15□□□□□ -1.1
RTN4R-206ENST00000474642 ST20Q9HBF5 79 aa8.15□□□□□ -1.1
RTN4R-206ENST00000474642 A0A1B0GUV1 79 aa8.14□□□□□ -1.11
RTN4R-206ENST00000474642 GAGE12HA6NDE8 117 aa8.14□□□□□ -1.11
RTN4R-206ENST00000474642 SDHAF1A6NFY7 115 aa8.14□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms