RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 TMEM242Q9NWH2 141 aa8.45□□□□□ -1.06
SHROOM3-204ENST00000473602 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
SHROOM3-204ENST00000473602 IGKV2-29A2NJV5 120 aaPredicted RBP8.44□□□□□ -1.06
SHROOM3-204ENST00000473602 VCYO14598 125 aa8.44□□□□□ -1.06
SHROOM3-204ENST00000473602 CAMPP49913 170 aa8.44□□□□□ -1.06
SHROOM3-204ENST00000473602 SUMO2P61956 95 aaKnown RBP8.44□□□□□ -1.06
SHROOM3-204ENST00000473602 MRPL51Q4U2R6 128 aaKnown RBP8.44□□□□□ -1.06
SHROOM3-204ENST00000473602 DGAT2L7PQ6IED9 249 aa8.44□□□□□ -1.06
SHROOM3-204ENST00000473602 NRACQ8N912 160 aa8.44□□□□□ -1.06
SHROOM3-204ENST00000473602 BTF3L4Q96K17 158 aa8.44□□□□□ -1.06
SHROOM3-204ENST00000473602 FAT3Q8TDW7 4589 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 A0A1B0GXF2 115 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 C7orf77A4D0Y5 90 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 SMKR1H3BMG3 65 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 PRSS1P07477 247 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 MRPL54Q6P161 138 aaKnown RBP8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 ATP5L2Q7Z4Y8 100 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 MRPL52Q86TS9 123 aaKnown RBP8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 ANAPC16Q96DE5 110 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 TMEM101Q96IK0 257 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 KIR2DL4Q99706 377 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 C20orf78Q9BR46 151 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 SEC11CQ9BY50 192 aa8.43□□□□□ -1.06
SHROOM3-204ENST00000473602 TRBV24-1A0A075B6N3 115 aa8.42□□□□□ -1.06
SHROOM3-204ENST00000473602 PLA2G1BP04054 148 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-204ENST00000473602 FCER1GP30273 86 aa8.42□□□□□ -1.06
SHROOM3-204ENST00000473602 RPL32P62910 135 aaKnown RBP8.42□□□□□ -1.06
SHROOM3-204ENST00000473602 SMAGPQ0VAQ4 97 aa8.42□□□□□ -1.06
SHROOM3-204ENST00000473602 LCE2CQ5TA81 110 aa8.42□□□□□ -1.06
SHROOM3-204ENST00000473602 OR5A1Q8NGJ0 315 aa8.42□□□□□ -1.06
SHROOM3-204ENST00000473602 TMEM218A2RU14 115 aa8.41□□□□□ -1.06
SHROOM3-204ENST00000473602 TCAPO15273 167 aa8.41□□□□□ -1.06
SHROOM3-204ENST00000473602 APOC3P02656 99 aa8.41□□□□□ -1.06
SHROOM3-204ENST00000473602 PPBPP02775 128 aa8.41□□□□□ -1.06
SHROOM3-204ENST00000473602 MT-ND4LP03901 98 aa8.41□□□□□ -1.06
SHROOM3-204ENST00000473602 CKS2P33552 79 aa8.41□□□□□ -1.06
SHROOM3-204ENST00000473602 LINC01620Q4KN68 170 aa8.41□□□□□ -1.06
SHROOM3-204ENST00000473602 LINC00528Q8N1L1 170 aa8.41□□□□□ -1.06
SHROOM3-204ENST00000473602 CARHSP1Q9Y2V2 147 aaKnown RBP8.41□□□□□ -1.06
SHROOM3-204ENST00000473602 IGKV3OR2-268A0A0C4DH90 116 aa8.4□□□□□ -1.06
SHROOM3-204ENST00000473602 PHOX2AO14813 284 aa8.4□□□□□ -1.06
SHROOM3-204ENST00000473602 C10orf91Q5T1B1 145 aa8.4□□□□□ -1.06
SHROOM3-204ENST00000473602 C9orf163Q8N9P6 203 aa8.4□□□□□ -1.06
SHROOM3-204ENST00000473602 TMA7Q9Y2S6 64 aaKnown RBP8.4□□□□□ -1.06
SHROOM3-204ENST00000473602 CSDC2Q9Y534 153 aaKnown RBP8.4□□□□□ -1.06
SHROOM3-204ENST00000473602 hDV102S1A0JD36 115 aa8.39□□□□□ -1.07
SHROOM3-204ENST00000473602 GAGE12HA6NDE8 117 aa8.39□□□□□ -1.07
SHROOM3-204ENST00000473602 TNFRSF6BO95407 300 aa8.39□□□□□ -1.07
SHROOM3-204ENST00000473602 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
SHROOM3-204ENST00000473602 CFAP161Q6P656 301 aa8.39□□□□□ -1.07
SHROOM3-204ENST00000473602 CHCHD10Q8WYQ3 142 aaPredicted RBP8.39□□□□□ -1.07
SHROOM3-204ENST00000473602 TMEM18Q96B42 140 aa8.39□□□□□ -1.07
SHROOM3-204ENST00000473602 AP5S1Q9NUS5 200 aa8.39□□□□□ -1.07
SHROOM3-204ENST00000473602 D6R8Y8 96 aa8.38□□□□□ -1.07
SHROOM3-204ENST00000473602 ZNF664Q8N3J9 261 aa8.38□□□□□ -1.07
SHROOM3-204ENST00000473602 CHAC1Q9BUX1 264 aa8.38□□□□□ -1.07
SHROOM3-204ENST00000473602 SMIM2Q9BVW6 85 aa8.38□□□□□ -1.07
SHROOM3-204ENST00000473602 CDC42SE2Q9NRR3 84 aa8.38□□□□□ -1.07
SHROOM3-204ENST00000473602 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.37□□□□□ -1.07
SHROOM3-204ENST00000473602 LINC00959A0A1B0GUT2 108 aa8.37□□□□□ -1.07
SHROOM3-204ENST00000473602 SS18Q15532 418 aa8.37□□□□□ -1.07
SHROOM3-204ENST00000473602 SCXQ7RTU7 201 aa8.37□□□□□ -1.07
SHROOM3-204ENST00000473602 ORMDL3Q8N138 153 aa8.37□□□□□ -1.07
SHROOM3-204ENST00000473602 TIMM21Q9BVV7 248 aa8.37□□□□□ -1.07
SHROOM3-204ENST00000473602 UBE2D4Q9Y2X8 147 aa8.37□□□□□ -1.07
SHROOM3-204ENST00000473602 LOC105371267A0A1B0GV96 52 aa8.36□□□□□ -1.07
SHROOM3-204ENST00000473602 CCL25O15444 150 aa8.36□□□□□ -1.07
SHROOM3-204ENST00000473602 NPYP01303 97 aa8.36□□□□□ -1.07
SHROOM3-204ENST00000473602 C15orf56Q8N910 161 aa8.36□□□□□ -1.07
SHROOM3-204ENST00000473602 IMMP2LQ96T52 175 aa8.36□□□□□ -1.07
SHROOM3-204ENST00000473602 PLA2G2DQ9UNK4 145 aa8.36□□□□□ -1.07
SHROOM3-204ENST00000473602 LAMTOR2Q9Y2Q5 125 aa8.36□□□□□ -1.07
SHROOM3-204ENST00000473602 FOXI1Q12951 378 aa8.35□□□□□ -1.07
SHROOM3-204ENST00000473602 TMEM136Q6ZRR5 245 aa8.35□□□□□ -1.07
SHROOM3-204ENST00000473602 PRELID3AQ96N28 172 aa8.35□□□□□ -1.07
SHROOM3-204ENST00000473602 SMCO4Q9NRQ5 59 aa8.35□□□□□ -1.07
SHROOM3-204ENST00000473602 GVQW2A0A096LPI5 108 aaPredicted RBP8.34□□□□□ -1.07
SHROOM3-204ENST00000473602 ADCYAP1P18509 176 aa8.34□□□□□ -1.07
SHROOM3-204ENST00000473602 XCL1P47992 114 aa8.34□□□□□ -1.07
SHROOM3-204ENST00000473602 CD164L2Q6UWJ8 174 aa8.34□□□□□ -1.07
SHROOM3-204ENST00000473602 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
SHROOM3-204ENST00000473602 CTDSP1Q9GZU7 261 aa8.34□□□□□ -1.07
SHROOM3-204ENST00000473602 IGHV3-64A0A075B6Q5 118 aa8.33□□□□□ -1.08
SHROOM3-204ENST00000473602 PRSS47A8MTI9 375 aa8.33□□□□□ -1.08
SHROOM3-204ENST00000473602 C1orf196B1AJZ1 125 aa8.33□□□□□ -1.08
SHROOM3-204ENST00000473602 RHEBQ15382 184 aa8.33□□□□□ -1.08
SHROOM3-204ENST00000473602 SDIM1Q6ZPB5 146 aa8.33□□□□□ -1.08
SHROOM3-204ENST00000473602 SPANXA1Q9NS26 97 aa8.33□□□□□ -1.08
SHROOM3-204ENST00000473602 TRAV9-1A0A075B6T8 112 aa8.32□□□□□ -1.08
SHROOM3-204ENST00000473602 IGHV1-58A0A0C4DH39 117 aa8.32□□□□□ -1.08
SHROOM3-204ENST00000473602 OXTP01178 125 aa8.32□□□□□ -1.08
SHROOM3-204ENST00000473602 SLPIP03973 132 aa8.32□□□□□ -1.08
SHROOM3-204ENST00000473602 RAB5AP20339 215 aa8.32□□□□□ -1.08
SHROOM3-204ENST00000473602 HIGD2BQ4VC39 106 aa8.31□□□□□ -1.08
SHROOM3-204ENST00000473602 Q6ZUT4 128 aa8.31□□□□□ -1.08
SHROOM3-204ENST00000473602 MAP1LC3AQ9H492 121 aa8.31□□□□□ -1.08
SHROOM3-204ENST00000473602 PKHD1L1Q86WI1 4243 aa8.3□□□□□ -1.08
SHROOM3-204ENST00000473602 KRTAP10-4P60372 401 aaPredicted RBP8.3□□□□□ -1.08
SHROOM3-204ENST00000473602 RAB5BP61020 215 aa8.3□□□□□ -1.08
SHROOM3-204ENST00000473602 RPL39P62891 51 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms