RNA–Protein interactions for RNA: ENST00000473420.5

CTDSP1-207, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-207ENST00000473420 CLPSL2Q6UWE3 100 aa12.66□□□□□ -0.38
CTDSP1-207ENST00000473420 CDC42SE2Q9NRR3 84 aa12.66□□□□□ -0.38
CTDSP1-207ENST00000473420 SPANXA1Q9NS26 97 aa12.66□□□□□ -0.38
CTDSP1-207ENST00000473420 IGKV2D-24A0A075B6R9 120 aa12.65□□□□□ -0.38
CTDSP1-207ENST00000473420 SCO1O75880 301 aa12.65□□□□□ -0.38
CTDSP1-207ENST00000473420 G0S2P27469 103 aa12.65□□□□□ -0.38
CTDSP1-207ENST00000473420 RPL39P62891 51 aaKnown RBP12.65□□□□□ -0.38
CTDSP1-207ENST00000473420 C18orf32Q8TCD1 76 aa12.65□□□□□ -0.38
CTDSP1-207ENST00000473420 ATP6V1G1O75348 118 aa12.64□□□□□ -0.39
CTDSP1-207ENST00000473420 ZNF664Q8N3J9 261 aa12.64□□□□□ -0.39
CTDSP1-207ENST00000473420 A0A1B0GVY2 172 aa12.63□□□□□ -0.39
CTDSP1-207ENST00000473420 CYSLTR1Q9Y271 337 aa12.63□□□□□ -0.39
CTDSP1-207ENST00000473420 PYGO1Q9Y3Y4 419 aa12.63□□□□□ -0.39
CTDSP1-207ENST00000473420 MRPS36P82909 103 aaKnown RBP12.62□□□□□ -0.39
CTDSP1-207ENST00000473420 C2orf66Q6UXQ4 117 aa12.62□□□□□ -0.39
CTDSP1-207ENST00000473420 FA2HQ7L5A8 372 aa12.62□□□□□ -0.39
CTDSP1-207ENST00000473420 FAT2Q9NYQ8 4349 aa12.61□□□□□ -0.39
CTDSP1-207ENST00000473420 LINC01549A6NIU2 74 aa12.61□□□□□ -0.39
CTDSP1-207ENST00000473420 TRGC2P03986 189 aa12.61□□□□□ -0.39
CTDSP1-207ENST00000473420 A0A087WTM6 91 aa12.6□□□□□ -0.39
CTDSP1-207ENST00000473420 LRCOL1A6NCL2 159 aa12.6□□□□□ -0.39
CTDSP1-207ENST00000473420 EREGO14944 169 aa12.6□□□□□ -0.39
CTDSP1-207ENST00000473420 NPSP0C0P6 89 aa12.6□□□□□ -0.39
CTDSP1-207ENST00000473420 KRTAP26-1Q6PEX3 210 aa12.6□□□□□ -0.39
CTDSP1-207ENST00000473420 RAB5BP61020 215 aa12.59□□□□□ -0.39
CTDSP1-207ENST00000473420 Q6ZUT4 128 aa12.59□□□□□ -0.39
CTDSP1-207ENST00000473420 AP5S1Q9NUS5 200 aa12.59□□□□□ -0.39
CTDSP1-207ENST00000473420 IGLV10-54A0A075B6I4 117 aa12.58□□□□□ -0.4
CTDSP1-207ENST00000473420 IGKV3OR2-268A0A0C4DH90 116 aa12.58□□□□□ -0.4
CTDSP1-207ENST00000473420 LINC00959A0A1B0GUT2 108 aa12.58□□□□□ -0.4
CTDSP1-207ENST00000473420 CCL25O15444 150 aa12.58□□□□□ -0.4
CTDSP1-207ENST00000473420 LINC00614P0C842 121 aa12.58□□□□□ -0.4
CTDSP1-207ENST00000473420 MAPKAPK5-AS1Q8N8E1 139 aa12.58□□□□□ -0.4
CTDSP1-207ENST00000473420 FAM104AQ969W3 186 aa12.58□□□□□ -0.4
CTDSP1-207ENST00000473420 TOMM6Q96B49 74 aa12.58□□□□□ -0.4
CTDSP1-207ENST00000473420 URB1-AS1Q96HZ7 61 aa12.58□□□□□ -0.4
CTDSP1-207ENST00000473420 SS18Q15532 418 aa12.56□□□□□ -0.4
CTDSP1-207ENST00000473420 TIMM17AQ99595 171 aa12.56□□□□□ -0.4
CTDSP1-207ENST00000473420 IGLV4-3A0A075B6K6 122 aa12.55□□□□□ -0.4
CTDSP1-207ENST00000473420 IGIPA6NJ69 53 aa12.55□□□□□ -0.4
CTDSP1-207ENST00000473420 RNASE13Q5GAN3 156 aaKnown RBP12.55□□□□□ -0.4
CTDSP1-207ENST00000473420 BAALCQ8WXS3 180 aa12.55□□□□□ -0.4
CTDSP1-207ENST00000473420 CHCHD10Q8WYQ3 142 aaPredicted RBP12.55□□□□□ -0.4
CTDSP1-207ENST00000473420 TMEM141Q96I45 108 aa12.55□□□□□ -0.4
CTDSP1-207ENST00000473420 HECTD4Q9Y4D8 3996 aa12.54□□□□□ -0.4
CTDSP1-207ENST00000473420 CHCHD1Q96BP2 118 aaKnown RBP12.54□□□□□ -0.4
CTDSP1-207ENST00000473420 OPRPNQ99935 248 aaPredicted RBP12.54□□□□□ -0.4
CTDSP1-207ENST00000473420 PKD1P98161 4303 aa12.54□□□□□ -0.4
CTDSP1-207ENST00000473420 C1orf196B1AJZ1 125 aa12.53□□□□□ -0.4
CTDSP1-207ENST00000473420 PAPPA-AS1Q5QFB9 102 aa12.53□□□□□ -0.4
CTDSP1-207ENST00000473420 Q6ZN92 141 aa12.53□□□□□ -0.4
CTDSP1-207ENST00000473420 ERASQ7Z444 233 aa12.53□□□□□ -0.4
CTDSP1-207ENST00000473420 Q8N814 137 aa12.53□□□□□ -0.4
CTDSP1-207ENST00000473420 GAGE12HA6NDE8 117 aa12.52□□□□□ -0.41
CTDSP1-207ENST00000473420 WFDC2Q14508 124 aa12.52□□□□□ -0.41
CTDSP1-207ENST00000473420 C14orf177Q52M58 125 aa12.52□□□□□ -0.41
CTDSP1-207ENST00000473420 TEX43Q6ZNM6 134 aa12.52□□□□□ -0.41
CTDSP1-207ENST00000473420 A0A096LNJ9 63 aa12.51□□□□□ -0.41
CTDSP1-207ENST00000473420 TRAV13-1A0A0B4J241 112 aa12.51□□□□□ -0.41
CTDSP1-207ENST00000473420 IFITM10A6NMD0 228 aa12.51□□□□□ -0.41
CTDSP1-207ENST00000473420 HBDP02042 147 aa12.51□□□□□ -0.41
CTDSP1-207ENST00000473420 CD164L2Q6UWJ8 174 aa12.51□□□□□ -0.41
CTDSP1-207ENST00000473420 SPATA12Q7Z6I5 190 aa12.51□□□□□ -0.41
CTDSP1-207ENST00000473420 SCGB3A1Q96QR1 104 aa12.51□□□□□ -0.41
CTDSP1-207ENST00000473420 AMELXQ99217 191 aa12.51□□□□□ -0.41
CTDSP1-207ENST00000473420 LECT2O14960 151 aa12.5□□□□□ -0.41
CTDSP1-207ENST00000473420 XCL1P47992 114 aa12.5□□□□□ -0.41
CTDSP1-207ENST00000473420 FOXI1Q12951 378 aa12.5□□□□□ -0.41
CTDSP1-207ENST00000473420 CDPF1Q6NVV7 123 aa12.5□□□□□ -0.41
CTDSP1-207ENST00000473420 BAGE3Q86Y29 109 aa12.5□□□□□ -0.41
CTDSP1-207ENST00000473420 NTN5Q8WTR8 489 aaPredicted RBP12.5□□□□□ -0.41
CTDSP1-207ENST00000473420 C2orf88Q9BSF0 95 aa12.5□□□□□ -0.41
CTDSP1-207ENST00000473420 PGPEP1Q9NXJ5 209 aa12.5□□□□□ -0.41
CTDSP1-207ENST00000473420 EPPK1P58107 5090 aaKnown RBP12.49□□□□□ -0.41
CTDSP1-207ENST00000473420 USP17L23D6RBM5 183 aa12.49□□□□□ -0.41
CTDSP1-207ENST00000473420 KRTAP10-2P60368 255 aa12.49□□□□□ -0.41
CTDSP1-207ENST00000473420 LINC00173Q6ZV60 143 aa12.49□□□□□ -0.41
CTDSP1-207ENST00000473420 VCX2Q9H322 139 aa12.49□□□□□ -0.41
CTDSP1-207ENST00000473420 DNAH11Q96DT5 4516 aa12.48□□□□□ -0.41
CTDSP1-207ENST00000473420 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.46□□□□□ -0.41
CTDSP1-207ENST00000473420 UBE2D1P51668 147 aa12.46□□□□□ -0.41
CTDSP1-207ENST00000473420 PMCHL1Q16048 86 aa12.46□□□□□ -0.41
CTDSP1-207ENST00000473420 PDZD11Q5EBL8 140 aa12.46□□□□□ -0.41
CTDSP1-207ENST00000473420 CFAP161Q6P656 301 aa12.46□□□□□ -0.41
CTDSP1-207ENST00000473420 HSBP1O75506 76 aa12.45□□□□□ -0.42
CTDSP1-207ENST00000473420 FAM19A3Q7Z5A8 133 aa12.45□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST1H2BKO60814 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST1H2BJP06899 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST1H2BOP23527 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST1H2BBP33778 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST1H2BDP58876 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 LINC00310P59036 64 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST1H2BCP62807 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST2H2BEQ16778 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 C15orf56Q8N910 161 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST1H2BHQ93079 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST1H2BNQ99877 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 HIST1H2BMQ99879 126 aa12.44□□□□□ -0.42
CTDSP1-207ENST00000473420 COX7A2LO14548 114 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms