RNA–Protein interactions for RNA: ENST00000473334.1

PTP4A1-203, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

TSL 3

Gene PTP4A1, Length 638 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-203ENST00000473334 S100A8P05109 93 aa14.52□□□□□ -0.09
PTP4A1-203ENST00000473334 HBBP68871 147 aa14.52□□□□□ -0.09
PTP4A1-203ENST00000473334 MRPL54Q6P161 138 aaKnown RBP14.52□□□□□ -0.09
PTP4A1-203ENST00000473334 C15orf56Q8N910 161 aa14.52□□□□□ -0.09
PTP4A1-203ENST00000473334 KIR2DL4Q99706 377 aa14.52□□□□□ -0.09
PTP4A1-203ENST00000473334 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.51□□□□□ -0.09
PTP4A1-203ENST00000473334 MYCBP2O75592 4640 aa14.51□□□□□ -0.09
PTP4A1-203ENST00000473334 A0A1B0GXF2 115 aa14.5□□□□□ -0.09
PTP4A1-203ENST00000473334 CKS2P33552 79 aa14.5□□□□□ -0.09
PTP4A1-203ENST00000473334 SDIM1Q6ZPB5 146 aa14.5□□□□□ -0.09
PTP4A1-203ENST00000473334 LINC00959A0A1B0GUT2 108 aa14.49□□□□□ -0.09
PTP4A1-203ENST00000473334 F8W036 122 aa14.49□□□□□ -0.09
PTP4A1-203ENST00000473334 SLPIP03973 132 aa14.49□□□□□ -0.09
PTP4A1-203ENST00000473334 C20orf78Q9BR46 151 aa14.49□□□□□ -0.09
PTP4A1-203ENST00000473334 CDC42SE2Q9NRR3 84 aa14.49□□□□□ -0.09
PTP4A1-203ENST00000473334 TRBV24-1A0A075B6N3 115 aa14.48□□□□□ -0.09
PTP4A1-203ENST00000473334 IGHV3-64A0A075B6Q5 118 aa14.48□□□□□ -0.09
PTP4A1-203ENST00000473334 FOXI1Q12951 378 aa14.48□□□□□ -0.09
PTP4A1-203ENST00000473334 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.48□□□□□ -0.09
PTP4A1-203ENST00000473334 FLG2Q5D862 2391 aaPredicted RBP14.47□□□□□ -0.09
PTP4A1-203ENST00000473334 CCL25O15444 150 aa14.47□□□□□ -0.09
PTP4A1-203ENST00000473334 XCL1P47992 114 aa14.47□□□□□ -0.09
PTP4A1-203ENST00000473334 RPL32P62910 135 aaKnown RBP14.47□□□□□ -0.09
PTP4A1-203ENST00000473334 SMAGPQ0VAQ4 97 aa14.47□□□□□ -0.09
PTP4A1-203ENST00000473334 PNRC1Q12796 327 aaPredicted RBP14.47□□□□□ -0.09
PTP4A1-203ENST00000473334 ZNF664Q8N3J9 261 aa14.47□□□□□ -0.09
PTP4A1-203ENST00000473334 SS18Q15532 418 aa14.46□□□□□ -0.09
PTP4A1-203ENST00000473334 HIGD2BQ4VC39 106 aa14.46□□□□□ -0.09
PTP4A1-203ENST00000473334 ATP5L2Q7Z4Y8 100 aa14.46□□□□□ -0.09
PTP4A1-203ENST00000473334 CSDC2Q9Y534 153 aaKnown RBP14.46□□□□□ -0.09
PTP4A1-203ENST00000473334 D6R8Y8 96 aa14.45□□□□□ -0.1
PTP4A1-203ENST00000473334 PANO1I0J062 215 aa14.45□□□□□ -0.1
PTP4A1-203ENST00000473334 TNFRSF6BO95407 300 aa14.45□□□□□ -0.1
PTP4A1-203ENST00000473334 UBE2D4Q9Y2X8 147 aa14.45□□□□□ -0.1
PTP4A1-203ENST00000473334 GVQW2A0A096LPI5 108 aaPredicted RBP14.44□□□□□ -0.1
PTP4A1-203ENST00000473334 TCAPO15273 167 aa14.44□□□□□ -0.1
PTP4A1-203ENST00000473334 TMEM18Q96B42 140 aa14.44□□□□□ -0.1
PTP4A1-203ENST00000473334 PPBPP02775 128 aa14.43□□□□□ -0.1
PTP4A1-203ENST00000473334 CIRBPQ14011 172 aaKnown RBP14.43□□□□□ -0.1
PTP4A1-203ENST00000473334 CLLU1Q5K131 121 aa14.43□□□□□ -0.1
PTP4A1-203ENST00000473334 SMIM2Q9BVW6 85 aa14.43□□□□□ -0.1
PTP4A1-203ENST00000473334 PHOX2AO14813 284 aa14.42□□□□□ -0.1
PTP4A1-203ENST00000473334 ANAPC16Q96DE5 110 aa14.42□□□□□ -0.1
PTP4A1-203ENST00000473334 DMBT1Q9UGM3 2413 aaPredicted RBP14.41□□□□□ -0.1
PTP4A1-203ENST00000473334 NPYP01303 97 aa14.41□□□□□ -0.1
PTP4A1-203ENST00000473334 MT-ND4LP03901 98 aa14.41□□□□□ -0.1
PTP4A1-203ENST00000473334 KRTAP10-4P60372 401 aaPredicted RBP14.41□□□□□ -0.1
PTP4A1-203ENST00000473334 CD164L2Q6UWJ8 174 aa14.41□□□□□ -0.1
PTP4A1-203ENST00000473334 TIMM21Q9BVV7 248 aa14.41□□□□□ -0.1
PTP4A1-203ENST00000473334 HERC1Q15751 4861 aa14.41□□□□□ -0.1
PTP4A1-203ENST00000473334 IGHV1-58A0A0C4DH39 117 aa14.4□□□□□ -0.1
PTP4A1-203ENST00000473334 RNASE13Q5GAN3 156 aaKnown RBP14.39□□□□□ -0.11
PTP4A1-203ENST00000473334 ORMDL3Q8N138 153 aa14.39□□□□□ -0.11
PTP4A1-203ENST00000473334 C1orf196B1AJZ1 125 aa14.38□□□□□ -0.11
PTP4A1-203ENST00000473334 CHTF8P0CG12 524 aa14.38□□□□□ -0.11
PTP4A1-203ENST00000473334 Q6ZUT4 128 aa14.38□□□□□ -0.11
PTP4A1-203ENST00000473334 RPL37AP61513 92 aaKnown RBP14.37□□□□□ -0.11
PTP4A1-203ENST00000473334 TMEM136Q6ZRR5 245 aa14.37□□□□□ -0.11
PTP4A1-203ENST00000473334 SPACA4Q8TDM5 124 aa14.37□□□□□ -0.11
PTP4A1-203ENST00000473334 RPL39P62891 51 aaKnown RBP14.36□□□□□ -0.11
PTP4A1-203ENST00000473334 COX6A2Q02221 97 aa14.36□□□□□ -0.11
PTP4A1-203ENST00000473334 PRELID3AQ96N28 172 aa14.36□□□□□ -0.11
PTP4A1-203ENST00000473334 TRAV13-1A0A0B4J241 112 aa14.35□□□□□ -0.11
PTP4A1-203ENST00000473334 DPH3Q96FX2 82 aa14.35□□□□□ -0.11
PTP4A1-203ENST00000473334 A0A087WYN8 130 aa14.34□□□□□ -0.11
PTP4A1-203ENST00000473334 IFITM2Q01629 132 aa14.34□□□□□ -0.11
PTP4A1-203ENST00000473334 PRSS3P2Q8NHM4 247 aa14.34□□□□□ -0.11
PTP4A1-203ENST00000473334 SPANXA1Q9NS26 97 aa14.34□□□□□ -0.11
PTP4A1-203ENST00000473334 COX7A2LO14548 114 aa14.33□□□□□ -0.12
PTP4A1-203ENST00000473334 UQCC3Q6UW78 93 aa14.33□□□□□ -0.12
PTP4A1-203ENST00000473334 LINC00526Q96FQ7 95 aa14.33□□□□□ -0.12
PTP4A1-203ENST00000473334 ZNF561-AS1K7EIQ3 104 aa14.32□□□□□ -0.12
PTP4A1-203ENST00000473334 MALP21145 153 aa14.32□□□□□ -0.12
PTP4A1-203ENST00000473334 CARD19Q96LW7 228 aa14.32□□□□□ -0.12
PTP4A1-203ENST00000473334 LAMTOR2Q9Y2Q5 125 aa14.32□□□□□ -0.12
PTP4A1-203ENST00000473334 PKHD1L1Q86WI1 4243 aa14.32□□□□□ -0.12
PTP4A1-203ENST00000473334 RAB5AP20339 215 aa14.31□□□□□ -0.12
PTP4A1-203ENST00000473334 PLAC8Q9NZF1 115 aa14.31□□□□□ -0.12
PTP4A1-203ENST00000473334 KRTAP29-1A8MX34 341 aaPredicted RBP14.3□□□□□ -0.12
PTP4A1-203ENST00000473334 J3QL48 77 aa14.3□□□□□ -0.12
PTP4A1-203ENST00000473334 ADCYAP1P18509 176 aa14.3□□□□□ -0.12
PTP4A1-203ENST00000473334 MRPS36P82909 103 aaKnown RBP14.3□□□□□ -0.12
PTP4A1-203ENST00000473334 FAM104AQ969W3 186 aa14.3□□□□□ -0.12
PTP4A1-203ENST00000473334 PKIGQ9Y2B9 76 aa14.3□□□□□ -0.12
PTP4A1-203ENST00000473334 IGKV2-24A0A0C4DH68 120 aa14.29□□□□□ -0.12
PTP4A1-203ENST00000473334 TMEM218A2RU14 115 aa14.29□□□□□ -0.12
PTP4A1-203ENST00000473334 PRSS47A8MTI9 375 aa14.29□□□□□ -0.12
PTP4A1-203ENST00000473334 MAJINQ3KP22 176 aa14.29□□□□□ -0.12
PTP4A1-203ENST00000473334 MAP1LC3AQ9H492 121 aa14.29□□□□□ -0.12
PTP4A1-203ENST00000473334 SYCNQ0VAF6 134 aa14.28□□□□□ -0.12
PTP4A1-203ENST00000473334 IMMP2LQ96T52 175 aa14.28□□□□□ -0.12
PTP4A1-203ENST00000473334 OPRPNQ99935 248 aaPredicted RBP14.28□□□□□ -0.12
PTP4A1-203ENST00000473334 A0A096LNI7 61 aa14.27□□□□□ -0.13
PTP4A1-203ENST00000473334 LOC389332A0A1B0GUA5 103 aa14.27□□□□□ -0.13
PTP4A1-203ENST00000473334 C5orf38Q86SI9 138 aa14.27□□□□□ -0.13
PTP4A1-203ENST00000473334 IGLV4-69A0A075B6H9 119 aa14.26□□□□□ -0.13
PTP4A1-203ENST00000473334 APOMO95445 188 aa14.26□□□□□ -0.13
PTP4A1-203ENST00000473334 IFI27P40305 119 aaPredicted RBP14.26□□□□□ -0.13
PTP4A1-203ENST00000473334 IFITM10A6NMD0 228 aa14.25□□□□□ -0.13
PTP4A1-203ENST00000473334 CTDSP1Q9GZU7 261 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms