RNA–Protein interactions for RNA: ENST00000472697.5

XRN1-210, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 2,652 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-210ENST00000472697 APOC1P02654 83 aa1.33□□□□□ -2.2
XRN1-210ENST00000472697 CD3DP04234 171 aa1.33□□□□□ -2.2
XRN1-210ENST00000472697 DBIP07108 87 aaKnown RBP1.33□□□□□ -2.2
XRN1-210ENST00000472697 EVI2AP22794 236 aa1.33□□□□□ -2.2
XRN1-210ENST00000472697 NOP16Q9Y3C1 178 aaKnown RBP1.33□□□□□ -2.2
XRN1-210ENST00000472697 DNAH7Q8WXX0 4024 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 TENM2Q9NT68 2774 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 IGHV3-64A0A075B6Q5 118 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 TRGV10A0A0A0MS01 117 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 BORCS7-ASMTA0A0B4J1R7 106 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 A0A0D9SG52 128 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 EFCAB10A6NFE3 127 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 MRPL33O75394 65 aaKnown RBP1.32□□□□□ -2.2
XRN1-210ENST00000472697 FXYD2P54710 66 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 NCS1P62166 190 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 BLCAPP62952 87 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 DEFB112Q30KQ8 113 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 Q6ZRN7 208 aaPredicted RBP1.32□□□□□ -2.2
XRN1-210ENST00000472697 CDC42EP2O14613 210 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 UBL3O95164 117 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 IQCJQ1A5X6 159 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 ARL11Q969Q4 196 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 C14orf144Q96I85 54 aa1.32□□□□□ -2.2
XRN1-210ENST00000472697 DNAH9Q9NYC9 4486 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 C3orf85A0A1B0GTC6 90 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 IGFL1Q6UW32 110 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 FAM216BQ8N7L0 139 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 Q96M85 177 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 OR4C12Q96R67 309 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 Q9BRP9 147 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 LIMD2Q9BT23 127 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 DNAH6Q9C0G6 4158 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 STAB2Q8WWQ8 2551 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 OR2T8A6NH00 312 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 PFDN1O60925 122 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 IGKCP01834 107 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 PCBD1P61457 104 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 CIRBPQ14011 172 aaKnown RBP1.31□□□□□ -2.2
XRN1-210ENST00000472697 OCIAD2Q56VL3 154 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 SLC48A1Q6P1K1 146 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 ZNF826PQ6ZT77 177 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 MMGT1Q8N4V1 131 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 OR5D14Q8NGL3 314 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 OTOSQ8NHW6 89 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 CST11Q9H112 138 aa1.31□□□□□ -2.2
XRN1-210ENST00000472697 LYSTQ99698 3801 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 A6NN06 94 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 FAM25AB3EWG3 89 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 FAM25CB3EWG5 89 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 FAM25GB3EWG6 89 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 SDCBPO00560 298 aaPredicted RBP1.3□□□□□ -2.2
XRN1-210ENST00000472697 RNASE2P10153 161 aaKnown RBP1.3□□□□□ -2.2
XRN1-210ENST00000472697 ZNF93P35789 620 aaPredicted RBP1.3□□□□□ -2.2
XRN1-210ENST00000472697 NDUFA6P56556 154 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 KRTAP10-1P60331 282 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 Q6ZTI0 123 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 C10orf82Q8WW14 230 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 SEC11CQ9BY50 192 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 SCN3BQ9NY72 215 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 HECTD4Q9Y4D8 3996 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 H3BQF6 201 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 M0R1W7 72 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 CCL22O00626 93 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 PSCAO43653 123 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 HBDP02042 147 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 TSPAN19P0C672 248 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 CDK6Q00534 326 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 COL7A1Q02388 2944 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 MIR22HGQ0VDD5 57 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 SPCS2Q15005 226 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 MEIG1Q5JSS6 88 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 S100A7L2Q5SY68 101 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 KRTAP5-5Q701N2 237 aaPredicted RBP1.3□□□□□ -2.2
XRN1-210ENST00000472697 LSM10Q969L4 123 aaKnown RBP1.3□□□□□ -2.2
XRN1-210ENST00000472697 CYTL1Q9NRR1 136 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 TMEM106BQ9NUM4 274 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 LAMTOR3Q9UHA4 124 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 SVEP1Q4LDE5 3571 aa1.3□□□□□ -2.2
XRN1-210ENST00000472697 WNK2Q9Y3S1 2297 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 MIF4GDA9UHW6 222 aaKnown RBP1.29□□□□□ -2.2
XRN1-210ENST00000472697 SULT1C4O75897 302 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 METTL15P1P0C7V9 234 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 EMX2Q04743 252 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 KRTAP26-1Q6PEX3 210 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 BRD3OSQ6XYD6 125 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 FP248Q71RG6 208 aaPredicted RBP1.29□□□□□ -2.2
XRN1-210ENST00000472697 LINC00269Q8N2A0 174 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 HYLS1Q96M11 299 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 CIB3Q96Q77 187 aaPredicted RBP1.29□□□□□ -2.2
XRN1-210ENST00000472697 TAS2R4Q9NYW5 299 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 GNG8Q9UK08 70 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 TPRKBQ9Y3C4 175 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 TCRBV4S1A1TA0A5B7 111 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 HLA-DRB4P13762 266 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 CNBPP62633 177 aaKnown RBP1.29□□□□□ -2.2
XRN1-210ENST00000472697 MYL5Q02045 173 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 IZUMO2Q6UXV1 221 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 TEN1Q86WV5 123 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 OR5A2Q8NGI9 324 aa1.29□□□□□ -2.2
XRN1-210ENST00000472697 TSKUQ8WUA8 353 aa1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 133.5 ms