RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ISOC2Q96AB3 205 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 LINC01600Q96MT4 127 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 JPT2Q9H910 190 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 WFDC1Q9HC57 220 aa2.22□□□□□ -2.05
XRN1-209ENST00000472625 FXYD6-FXYD2A0A087WZ82 144 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 GVQW2A0A096LPI5 108 aaPredicted RBP2.21□□□□□ -2.06
XRN1-209ENST00000472625 A0A0J9YXV3 536 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 FAM231BA6NCW3 169 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 EIF3GO75821 320 aaKnown RBP eCLIP2.21□□□□□ -2.06
XRN1-209ENST00000472625 NCR2O95944 276 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 MGPP08493 103 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 PRR3P79522 188 aaKnown RBP2.21□□□□□ -2.06
XRN1-209ENST00000472625 PNRC1Q12796 327 aaPredicted RBP2.21□□□□□ -2.06
XRN1-209ENST00000472625 ZNF345Q14585 488 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 AMMECR1LQ6DCA0 310 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 EIF5AL1Q6IS14 154 aaKnown RBP2.21□□□□□ -2.06
XRN1-209ENST00000472625 RASL11AQ6T310 242 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 CLPSL2Q6UWE3 100 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 Q6ZRP5 223 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 BAGE2Q86Y30 109 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 FER1L6-AS1Q8NA97 138 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 OR10AG1Q8NH19 301 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 GTSF1Q8WW33 167 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 TMEM101Q96IK0 257 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 BTF3L4Q96K17 158 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 MANBALQ9NQG1 85 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 KIF25-AS1Q9Y6Z4 181 aa2.21□□□□□ -2.06
XRN1-209ENST00000472625 SMIM1B2RUZ4 78 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 M0QY20 66 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 PHOX2AO14813 284 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 CCL25O15444 150 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 PDE6DO43924 150 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 IFNA1P01562 189 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 APCSP02743 223 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 MT1HL1P0DM35 61 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 TAGLN2P37802 199 aaKnown RBP2.2□□□□□ -2.06
XRN1-209ENST00000472625 CRIP1P50238 77 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 RAB5CP51148 216 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 HNRNPA3P51991 378 aaKnown RBP2.2□□□□□ -2.06
XRN1-209ENST00000472625 ZNF726P1Q15940 193 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 MAJINQ3KP22 176 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 RPL7L1Q6DKI1 246 aaKnown RBP2.2□□□□□ -2.06
XRN1-209ENST00000472625 ZNF664Q8N3J9 261 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 STPG4Q8N801 248 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 OR2D3Q8NGH3 330 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 SFT2D1Q8WV19 159 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 CARD19Q96LW7 228 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 TPPP3Q9BW30 176 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 NIT2Q9NQR4 276 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 PYGO1Q9Y3Y4 419 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 ALG5Q9Y673 324 aa2.2□□□□□ -2.06
XRN1-209ENST00000472625 TRAV26-2A0A0B4J265 109 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 IGHV1-58A0A0C4DH39 117 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 IGKV2-24A0A0C4DH68 120 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 KANTRA0A1W2PQU2 76 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 ARPC5O15511 151 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 PPP1R17O96001 155 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 RPL35P42766 123 aaKnown RBP2.19□□□□□ -2.06
XRN1-209ENST00000472625 GNG4P50150 75 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 NKX2-5P52952 324 aaPredicted RBP2.19□□□□□ -2.06
XRN1-209ENST00000472625 COX6A2Q02221 97 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 UBE2V1Q13404 147 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 CENPWQ5EE01 88 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 RNASEKQ6P5S7 137 aaKnown RBP2.19□□□□□ -2.06
XRN1-209ENST00000472625 KRTAP26-1Q6PEX3 210 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 NTM-AS1Q6ZSK4 140 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 KCNRGQ8N5I3 272 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 C20orf203Q8NBC4 194 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 FAM213BQ8TBF2 198 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 CHCHD10Q8WYQ3 142 aaPredicted RBP2.19□□□□□ -2.06
XRN1-209ENST00000472625 C11orf52Q96A22 123 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 BORCS7Q96B45 105 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 MRAP2Q96G30 205 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 Q9UF83 564 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 PSORS1C2Q9UIG4 136 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 MUC2Q02817 5179 aa2.19□□□□□ -2.06
XRN1-209ENST00000472625 LOC107984640A0A0U1RRK4 108 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 F8WDY8 70 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 TCAPO15273 167 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 APOMO95445 188 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 SCGB1D1O95968 90 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 IGLC6P0CF74 106 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 CHTF8P0CG12 524 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 FGF6P10767 208 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 CTRLP40313 264 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 RPL13AP40429 203 aaKnown RBP2.18□□□□□ -2.06
XRN1-209ENST00000472625 CAMPP49913 170 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 CCL20P78556 96 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 MEF2BQ02080 365 aaPredicted RBP2.18□□□□□ -2.06
XRN1-209ENST00000472625 SS18Q15532 418 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 ZC2HC1BQ5TFG8 222 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 TMUB2Q71RG4 321 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 C9orf62Q8N4C0 152 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 C15orf56Q8N910 161 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 OR5A1Q8NGJ0 315 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 MBD3L1Q8WWY6 194 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 CNFNQ9BYD5 112 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 BATF3Q9NR55 127 aa2.18□□□□□ -2.06
XRN1-209ENST00000472625 IGLV4-69A0A075B6H9 119 aa2.17□□□□□ -2.06
XRN1-209ENST00000472625 IGLV4-60A0A075B6I1 120 aa2.17□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms