RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 CLPSL2Q6UWE3 100 aa10.05□□□□□ -0.8
SNX13-205ENST00000471744 Q8N8P6 123 aa10.05□□□□□ -0.8
SNX13-205ENST00000471744 TIMM21Q9BVV7 248 aa10.05□□□□□ -0.8
SNX13-205ENST00000471744 NXT2Q9NPJ8 142 aaKnown RBP10.05□□□□□ -0.8
SNX13-205ENST00000471744 TGIF2-C20orf24A0A0A6YYL0 155 aa10.04□□□□□ -0.8
SNX13-205ENST00000471744 KIAA1644Q3SXP7 199 aa10.04□□□□□ -0.8
SNX13-205ENST00000471744 CDPF1Q6NVV7 123 aa10.04□□□□□ -0.8
SNX13-205ENST00000471744 SPATA12Q7Z6I5 190 aa10.04□□□□□ -0.8
SNX13-205ENST00000471744 MRPL18Q9H0U6 180 aaKnown RBP10.04□□□□□ -0.8
SNX13-205ENST00000471744 SMCO4Q9NRQ5 59 aa10.04□□□□□ -0.8
SNX13-205ENST00000471744 LOC389332A0A1B0GUA5 103 aa10.03□□□□□ -0.8
SNX13-205ENST00000471744 FABP9Q0Z7S8 132 aa10.03□□□□□ -0.8
SNX13-205ENST00000471744 ORMDL2Q53FV1 153 aa10.02□□□□□ -0.81
SNX13-205ENST00000471744 NTN5Q8WTR8 489 aaPredicted RBP10.02□□□□□ -0.81
SNX13-205ENST00000471744 CDC42SE2Q9NRR3 84 aa10.02□□□□□ -0.81
SNX13-205ENST00000471744 SPANXA1Q9NS26 97 aa10.02□□□□□ -0.81
SNX13-205ENST00000471744 UBE2D4Q9Y2X8 147 aa10.02□□□□□ -0.81
SNX13-205ENST00000471744 TRAPPC1Q9Y5R8 145 aa10.02□□□□□ -0.81
SNX13-205ENST00000471744 G0S2P27469 103 aa10.01□□□□□ -0.81
SNX13-205ENST00000471744 C14orf177Q52M58 125 aa10.01□□□□□ -0.81
SNX13-205ENST00000471744 ZNF664Q8N3J9 261 aa10.01□□□□□ -0.81
SNX13-205ENST00000471744 MAPKAPK5-AS1Q8N8E1 139 aa10.01□□□□□ -0.81
SNX13-205ENST00000471744 ALKBH7Q9BT30 221 aaPredicted RBP10.01□□□□□ -0.81
SNX13-205ENST00000471744 HECTD4Q9Y4D8 3996 aa10□□□□□ -0.81
SNX13-205ENST00000471744 C16orf90A8MZG2 172 aa10□□□□□ -0.81
SNX13-205ENST00000471744 Q8N814 137 aa10□□□□□ -0.81
SNX13-205ENST00000471744 BAALCQ8WXS3 180 aa10□□□□□ -0.81
SNX13-205ENST00000471744 YPEL4Q96NS1 127 aa10□□□□□ -0.81
SNX13-205ENST00000471744 IGLV10-54A0A075B6I4 117 aa9.99□□□□□ -0.81
SNX13-205ENST00000471744 IGKV3OR2-268A0A0C4DH90 116 aa9.99□□□□□ -0.81
SNX13-205ENST00000471744 CCL25O15444 150 aa9.99□□□□□ -0.81
SNX13-205ENST00000471744 KRTAP10-2P60368 255 aa9.99□□□□□ -0.81
SNX13-205ENST00000471744 RPL39P62891 51 aaKnown RBP9.99□□□□□ -0.81
SNX13-205ENST00000471744 KRTAP26-1Q6PEX3 210 aa9.99□□□□□ -0.81
SNX13-205ENST00000471744 PRSS3P2Q8NHM4 247 aa9.99□□□□□ -0.81
SNX13-205ENST00000471744 IFI27P40305 119 aaPredicted RBP9.98□□□□□ -0.81
SNX13-205ENST00000471744 MRPS36P82909 103 aaKnown RBP9.98□□□□□ -0.81
SNX13-205ENST00000471744 SS18Q15532 418 aa9.98□□□□□ -0.81
SNX13-205ENST00000471744 CBLN2Q8IUK8 224 aa9.98□□□□□ -0.81
SNX13-205ENST00000471744 CYSLTR1Q9Y271 337 aa9.98□□□□□ -0.81
SNX13-205ENST00000471744 PYGO1Q9Y3Y4 419 aa9.98□□□□□ -0.81
SNX13-205ENST00000471744 LINC00959A0A1B0GUT2 108 aa9.97□□□□□ -0.81
SNX13-205ENST00000471744 LINC01549A6NIU2 74 aa9.97□□□□□ -0.81
SNX13-205ENST00000471744 CHCHD10Q8WYQ3 142 aaPredicted RBP9.97□□□□□ -0.81
SNX13-205ENST00000471744 LECT2O14960 151 aa9.96□□□□□ -0.82
SNX13-205ENST00000471744 NPSP0C0P6 89 aa9.96□□□□□ -0.82
SNX13-205ENST00000471744 WFDC2Q14508 124 aa9.96□□□□□ -0.82
SNX13-205ENST00000471744 C2orf66Q6UXQ4 117 aa9.96□□□□□ -0.82
SNX13-205ENST00000471744 PKD1P98161 4303 aa9.96□□□□□ -0.82
SNX13-205ENST00000471744 IGLV5-52A0A0A0MRZ9 124 aa9.95□□□□□ -0.82
SNX13-205ENST00000471744 LINC01546A6NGU7 62 aa9.95□□□□□ -0.82
SNX13-205ENST00000471744 C1orf196B1AJZ1 125 aa9.95□□□□□ -0.82
SNX13-205ENST00000471744 USP17L23D6RBM5 183 aa9.95□□□□□ -0.82
SNX13-205ENST00000471744 LORP23490 312 aaPredicted RBP9.95□□□□□ -0.82
SNX13-205ENST00000471744 CFAP161Q6P656 301 aa9.95□□□□□ -0.82
SNX13-205ENST00000471744 Q6ZUT4 128 aa9.95□□□□□ -0.82
SNX13-205ENST00000471744 FA2HQ7L5A8 372 aa9.95□□□□□ -0.82
SNX13-205ENST00000471744 GAGE12HA6NDE8 117 aa9.94□□□□□ -0.82
SNX13-205ENST00000471744 PAPPA-AS1Q5QFB9 102 aa9.93□□□□□ -0.82
SNX13-205ENST00000471744 CD164L2Q6UWJ8 174 aa9.93□□□□□ -0.82
SNX13-205ENST00000471744 TMEM141Q96I45 108 aa9.93□□□□□ -0.82
SNX13-205ENST00000471744 PKHD1P08F94 4074 aa9.93□□□□□ -0.82
SNX13-205ENST00000471744 XCL1P47992 114 aa9.92□□□□□ -0.82
SNX13-205ENST00000471744 RAB5BP61020 215 aa9.92□□□□□ -0.82
SNX13-205ENST00000471744 RNASE13Q5GAN3 156 aaKnown RBP9.92□□□□□ -0.82
SNX13-205ENST00000471744 Q6ZN92 141 aa9.92□□□□□ -0.82
SNX13-205ENST00000471744 C18orf32Q8TCD1 76 aa9.92□□□□□ -0.82
SNX13-205ENST00000471744 TOMM6Q96B49 74 aa9.92□□□□□ -0.82
SNX13-205ENST00000471744 DNAH11Q96DT5 4516 aa9.92□□□□□ -0.82
SNX13-205ENST00000471744 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.91□□□□□ -0.82
SNX13-205ENST00000471744 IGLV4-3A0A075B6K6 122 aa9.91□□□□□ -0.82
SNX13-205ENST00000471744 TRAV13-1A0A0B4J241 112 aa9.91□□□□□ -0.82
SNX13-205ENST00000471744 GCSHP23434 173 aa9.91□□□□□ -0.82
SNX13-205ENST00000471744 FOXI1Q12951 378 aa9.91□□□□□ -0.82
SNX13-205ENST00000471744 TIMM17AQ99595 171 aa9.91□□□□□ -0.82
SNX13-205ENST00000471744 AP5S1Q9NUS5 200 aa9.91□□□□□ -0.82
SNX13-205ENST00000471744 IFITM10A6NMD0 228 aa9.9□□□□□ -0.82
SNX13-205ENST00000471744 TEX43Q6ZNM6 134 aa9.9□□□□□ -0.82
SNX13-205ENST00000471744 FAM104AQ969W3 186 aa9.9□□□□□ -0.82
SNX13-205ENST00000471744 C2orf88Q9BSF0 95 aa9.9□□□□□ -0.82
SNX13-205ENST00000471744 IGIPA6NJ69 53 aa9.89□□□□□ -0.83
SNX13-205ENST00000471744 PRSS1P07477 247 aa9.89□□□□□ -0.83
SNX13-205ENST00000471744 LINC00614P0C842 121 aa9.89□□□□□ -0.83
SNX13-205ENST00000471744 ERASQ7Z444 233 aa9.89□□□□□ -0.83
SNX13-205ENST00000471744 OPRPNQ99935 248 aaPredicted RBP9.89□□□□□ -0.83
SNX13-205ENST00000471744 IGHV1-58A0A0C4DH39 117 aa9.88□□□□□ -0.83
SNX13-205ENST00000471744 hDV102S1A0JD36 115 aa9.88□□□□□ -0.83
SNX13-205ENST00000471744 FUSP35637 526 aaKnown RBP eCLIP9.88□□□□□ -0.83
SNX13-205ENST00000471744 VCX2Q9H322 139 aa9.88□□□□□ -0.83
SNX13-205ENST00000471744 COLCA2A8K830 154 aa9.87□□□□□ -0.83
SNX13-205ENST00000471744 COX7A2LO14548 114 aa9.87□□□□□ -0.83
SNX13-205ENST00000471744 CDK2AP2O75956 126 aa9.87□□□□□ -0.83
SNX13-205ENST00000471744 C15orf56Q8N910 161 aa9.87□□□□□ -0.83
SNX13-205ENST00000471744 SCGB3A1Q96QR1 104 aa9.87□□□□□ -0.83
SNX13-205ENST00000471744 AMELXQ99217 191 aa9.87□□□□□ -0.83
SNX13-205ENST00000471744 GVQW2A0A096LPI5 108 aaPredicted RBP9.86□□□□□ -0.83
SNX13-205ENST00000471744 TRGC2P03986 189 aa9.86□□□□□ -0.83
SNX13-205ENST00000471744 MALP21145 153 aa9.86□□□□□ -0.83
SNX13-205ENST00000471744 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.85□□□□□ -0.83
SNX13-205ENST00000471744 APOMO95445 188 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms