RNA–Protein interactions for RNA: ENST00000471181.6

BRCA1-210, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 5,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-210ENST00000471181 CD164L2Q6UWJ8 174 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP5.11□□□□□ -1.59
BRCA1-210ENST00000471181 Q9UF83 564 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 NACAE9PAV3 2078 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 DOCK10Q96BY6 2186 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 RALGAPA2Q2PPJ7 1873 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 KIAA1671Q9BY89 1806 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 RBX1P62877 108 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 SHISA2Q6UWI4 295 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 CCDC140Q96MF4 163 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 SEC16AO15027 2179 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 ABCA4P78363 2273 aa5.11□□□□□ -1.59
BRCA1-210ENST00000471181 HCG22E2RYF7 251 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 ADORA2A-AS1P86434 159 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 MSMPQ1L6U9 139 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 DEFB114Q30KQ6 69 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 IMUPQ9GZP8 106 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 MYOFQ9NZM1 2061 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 A0A1B0GU69 56 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 A0A087WVE0 104 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 E7EUB6 86 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 FREM3P0C091 2139 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 RSPO1Q2MKA7 263 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-210ENST00000471181 Q9BRP9 147 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 TP53BP1Q12888 1972 aaPredicted RBP5.1□□□□□ -1.59
BRCA1-210ENST00000471181 TNRC6AQ8NDV7 1962 aaKnown RBP5.1□□□□□ -1.59
BRCA1-210ENST00000471181 CACNA1EQ15878 2313 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 RTTNQ86VV8 2226 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 LINC00959A0A1B0GUT2 108 aa5.1□□□□□ -1.59
BRCA1-210ENST00000471181 ACACAQ13085 2346 aa5.09□□□□□ -1.59
BRCA1-210ENST00000471181 TRBV6-4A0A1B0GX49 114 aa5.09□□□□□ -1.59
BRCA1-210ENST00000471181 KIF26BQ2KJY2 2108 aa5.09□□□□□ -1.59
BRCA1-210ENST00000471181 NYNRINQ9P2P1 1898 aaKnown RBP5.09□□□□□ -1.59
BRCA1-210ENST00000471181 TSC2P49815 1807 aa5.09□□□□□ -1.6
BRCA1-210ENST00000471181 ODF3Q96PU9 254 aa5.08□□□□□ -1.6
BRCA1-210ENST00000471181 ZNF702PQ9H963 129 aa5.08□□□□□ -1.6
BRCA1-210ENST00000471181 LELP1Q5T871 98 aa5.08□□□□□ -1.6
BRCA1-210ENST00000471181 NTM-AS1Q6ZSK4 140 aa5.08□□□□□ -1.6
BRCA1-210ENST00000471181 C6orf223Q8N319 242 aa5.08□□□□□ -1.6
BRCA1-210ENST00000471181 M0QY20 66 aa5.08□□□□□ -1.6
BRCA1-210ENST00000471181 NRACQ8N912 160 aa5.08□□□□□ -1.6
BRCA1-210ENST00000471181 ACYP2P14621 99 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 GDF5OSQ5U4N7 250 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 U3KQA8 63 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 XGP55808 180 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 C2orf48Q96LS8 159 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 ABCA7Q8IZY2 2146 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 hDV103S1A0JD37 113 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 COX17Q14061 63 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 Q6YL49 198 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 CYSRT1A8MQ03 144 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 DOPEY2Q9Y3R5 2298 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 ATRXP46100 2492 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 DNAH12Q6ZR08 3092 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 IGLV8-61A0A075B6I0 122 aa5.07□□□□□ -1.6
BRCA1-210ENST00000471181 K7EQG2 157 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 ZNF524Q96C55 264 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 RNF185Q96GF1 192 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 KIAA2026Q5HYC2 2103 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 A0A087WSZ3 146 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 AKAP6Q13023 2319 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 EML6Q6ZMW3 1958 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 C9orf116Q5BN46 136 aaPredicted RBP5.06□□□□□ -1.6
BRCA1-210ENST00000471181 MBD6Q96DN6 1003 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 LIMD2Q9BT23 127 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 DYSFO75923 2080 aa5.06□□□□□ -1.6
BRCA1-210ENST00000471181 TSHBP01222 138 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 LINC00575Q6W349 94 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 SSBP3-AS1Q7Z2R9 100 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 TRBV10-3A0A0K0K1G6 114 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 IGLV3-1P01715 115 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 NCKAP5O14513 1909 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 C1orf64Q8NEQ6 169 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 TMEM254Q8TBM7 123 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 A0A087WYN8 130 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 PTPRDP23468 1912 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 Q8N814 137 aa5.05□□□□□ -1.6
BRCA1-210ENST00000471181 SPTBN1Q01082 2364 aaKnown RBP5.05□□□□□ -1.6
BRCA1-210ENST00000471181 Q8N3U1 123 aa5.04□□□□□ -1.6
BRCA1-210ENST00000471181 PRM2P04554 102 aa5.04□□□□□ -1.6
BRCA1-210ENST00000471181 PRR3P79522 188 aaKnown RBP5.04□□□□□ -1.6
BRCA1-210ENST00000471181 UNQ6190/PRO20217Q6UXQ8 127 aa5.04□□□□□ -1.6
BRCA1-210ENST00000471181 Q6ZS46 218 aa5.04□□□□□ -1.6
BRCA1-210ENST00000471181 ODF3BA8MYP8 253 aa5.04□□□□□ -1.6
BRCA1-210ENST00000471181 PLA2G2CQ5R387 149 aa5.04□□□□□ -1.6
BRCA1-210ENST00000471181 LY6G6DO95868 133 aa5.04□□□□□ -1.6
BRCA1-210ENST00000471181 C10orf99Q6UWK7 81 aa5.04□□□□□ -1.6
BRCA1-210ENST00000471181 IGLV1-47P01700 117 aa5.03□□□□□ -1.6
BRCA1-210ENST00000471181 PLA2G5P39877 138 aa5.03□□□□□ -1.6
BRCA1-210ENST00000471181 Q8IZM0 81 aa5.03□□□□□ -1.6
BRCA1-210ENST00000471181 YPEL4Q96NS1 127 aa5.03□□□□□ -1.6
BRCA1-210ENST00000471181 CHD3Q12873 2000 aaKnown RBP5.03□□□□□ -1.6
BRCA1-210ENST00000471181 CXCL6P80162 114 aa5.03□□□□□ -1.6
BRCA1-210ENST00000471181 MYLKQ15746 1914 aa5.03□□□□□ -1.6
BRCA1-210ENST00000471181 CADP27708 2225 aa5.03□□□□□ -1.6
BRCA1-210ENST00000471181 Q6ZSV7 163 aa5.03□□□□□ -1.6
BRCA1-210ENST00000471181 SPTAN1Q13813 2472 aaKnown RBP5.03□□□□□ -1.6
BRCA1-210ENST00000471181 CACNA1IQ9P0X4 2223 aa5.03□□□□□ -1.6
BRCA1-210ENST00000471181 ATP11AUNQ6ZP68 121 aa5.02□□□□□ -1.61
BRCA1-210ENST00000471181 BPTFQ12830 3046 aa5.02□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms