RNA–Protein interactions for RNA: ENST00000471037.1

SF3A1-206, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 3

Gene SF3A1, Length 555 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-206ENST00000471037 GTSF1LQ9H1H1 148 aa6.13□□□□□ -1.43
SF3A1-206ENST00000471037 IGHV3-38A0A0C4DH36 116 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 HSBP1O75506 76 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 TSHBP01222 138 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 DNAH10OSP0CZ25 163 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 G0S2P27469 103 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 TIRAPP58753 221 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 LAGE3Q14657 143 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 LYPD5Q6UWN5 251 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 LINC00528Q8N1L1 170 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 URB1-AS1Q96HZ7 61 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 TMA7Q9Y2S6 64 aaKnown RBP6.12□□□□□ -1.43
SF3A1-206ENST00000471037 VPS13BQ7Z7G8 4022 aa6.12□□□□□ -1.43
SF3A1-206ENST00000471037 TRAV9-2A0A087WT02 112 aa6.11□□□□□ -1.43
SF3A1-206ENST00000471037 ESDP10768 282 aa6.11□□□□□ -1.43
SF3A1-206ENST00000471037 LINC00310P59036 64 aa6.11□□□□□ -1.43
SF3A1-206ENST00000471037 TRBV25-1A0A075B6N4 114 aa6.1□□□□□ -1.43
SF3A1-206ENST00000471037 TRBV6-8A0A0A6YYG3 113 aa6.1□□□□□ -1.43
SF3A1-206ENST00000471037 IGHV1-24A0A0C4DH33 117 aa6.1□□□□□ -1.43
SF3A1-206ENST00000471037 LINC01549A6NIU2 74 aa6.1□□□□□ -1.43
SF3A1-206ENST00000471037 GCSHP23434 173 aa6.1□□□□□ -1.43
SF3A1-206ENST00000471037 AMTP48728 403 aa6.1□□□□□ -1.43
SF3A1-206ENST00000471037 NTM-AS1Q6ZSK4 140 aa6.1□□□□□ -1.43
SF3A1-206ENST00000471037 TMEM18Q96B42 140 aa6.1□□□□□ -1.43
SF3A1-206ENST00000471037 H7C423 109 aa6.09□□□□□ -1.43
SF3A1-206ENST00000471037 HBDP02042 147 aa6.09□□□□□ -1.43
SF3A1-206ENST00000471037 SMAGPQ0VAQ4 97 aa6.09□□□□□ -1.43
SF3A1-206ENST00000471037 LELP1Q5T871 98 aa6.09□□□□□ -1.43
SF3A1-206ENST00000471037 WFDC10BQ8IUB3 73 aa6.09□□□□□ -1.43
SF3A1-206ENST00000471037 C20orf203Q8NBC4 194 aa6.09□□□□□ -1.43
SF3A1-206ENST00000471037 TMEM243Q9BU79 118 aa6.09□□□□□ -1.43
SF3A1-206ENST00000471037 CHCHD7Q9BUK0 85 aa6.09□□□□□ -1.43
SF3A1-206ENST00000471037 CYSLTR1Q9Y271 337 aa6.09□□□□□ -1.43
SF3A1-206ENST00000471037 C5orf52A6NGY3 159 aa6.08□□□□□ -1.44
SF3A1-206ENST00000471037 FAM229AH3BQW9 127 aa6.08□□□□□ -1.44
SF3A1-206ENST00000471037 NUPR1O60356 82 aa6.08□□□□□ -1.44
SF3A1-206ENST00000471037 SMR3BP02814 79 aaPredicted RBP6.08□□□□□ -1.44
SF3A1-206ENST00000471037 PKIAP61925 76 aa6.08□□□□□ -1.44
SF3A1-206ENST00000471037 C2orf66Q6UXQ4 117 aa6.08□□□□□ -1.44
SF3A1-206ENST00000471037 C10orf126Q8N4M7 172 aa6.08□□□□□ -1.44
SF3A1-206ENST00000471037 DEFB104AQ8WTQ1 72 aa6.08□□□□□ -1.44
SF3A1-206ENST00000471037 PACRGQ96M98 296 aaPredicted RBP6.08□□□□□ -1.44
SF3A1-206ENST00000471037 FLG2Q5D862 2391 aaPredicted RBP6.08□□□□□ -1.44
SF3A1-206ENST00000471037 A0A096LNJ9 63 aa6.07□□□□□ -1.44
SF3A1-206ENST00000471037 TRAV8-6A0A0B4J262 113 aa6.07□□□□□ -1.44
SF3A1-206ENST00000471037 UBE2L6O14933 153 aa6.07□□□□□ -1.44
SF3A1-206ENST00000471037 S100A2P29034 98 aa6.07□□□□□ -1.44
SF3A1-206ENST00000471037 SNRPEP62304 92 aaKnown RBP6.07□□□□□ -1.44
SF3A1-206ENST00000471037 PMCHL1Q16048 86 aa6.07□□□□□ -1.44
SF3A1-206ENST00000471037 HIST3H2BBQ8N257 126 aa6.07□□□□□ -1.44
SF3A1-206ENST00000471037 FAM19A2Q8N3H0 131 aa6.07□□□□□ -1.44
SF3A1-206ENST00000471037 NTN5Q8WTR8 489 aaPredicted RBP6.07□□□□□ -1.44
SF3A1-206ENST00000471037 TOMM6Q96B49 74 aa6.07□□□□□ -1.44
SF3A1-206ENST00000471037 CHCHD5Q9BSY4 110 aa6.07□□□□□ -1.44
SF3A1-206ENST00000471037 SRRM2Q9UQ35 2752 aaKnown RBP6.07□□□□□ -1.44
SF3A1-206ENST00000471037 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.06□□□□□ -1.44
SF3A1-206ENST00000471037 IGKV2-29A2NJV5 120 aaPredicted RBP6.06□□□□□ -1.44
SF3A1-206ENST00000471037 LRCOL1A6NCL2 159 aa6.06□□□□□ -1.44
SF3A1-206ENST00000471037 NPSP0C0P6 89 aa6.06□□□□□ -1.44
SF3A1-206ENST00000471037 ZNF25P17030 456 aaPredicted RBP6.06□□□□□ -1.44
SF3A1-206ENST00000471037 SMCPP49901 116 aaPredicted RBP6.06□□□□□ -1.44
SF3A1-206ENST00000471037 RPL39P62891 51 aaKnown RBP6.06□□□□□ -1.44
SF3A1-206ENST00000471037 PDZD11Q5EBL8 140 aa6.06□□□□□ -1.44
SF3A1-206ENST00000471037 ERASQ7Z444 233 aa6.06□□□□□ -1.44
SF3A1-206ENST00000471037 MRPL52Q86TS9 123 aaKnown RBP6.06□□□□□ -1.44
SF3A1-206ENST00000471037 TIMM21Q9BVV7 248 aa6.06□□□□□ -1.44
SF3A1-206ENST00000471037 SPANXA1Q9NS26 97 aa6.06□□□□□ -1.44
SF3A1-206ENST00000471037 IGLV5-52A0A0A0MRZ9 124 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 ATP5LO75964 103 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 LEPROTL1O95214 131 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 FGF6P10767 208 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 HAMPP81172 84 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 AMMECR1LQ6DCA0 310 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 TMEM141Q96I45 108 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 SCGB3A1Q96QR1 104 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 TIMM17AQ99595 171 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 HSPB8Q9UJY1 196 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 UBE2D4Q9Y2X8 147 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 PYGO1Q9Y3Y4 419 aa6.05□□□□□ -1.44
SF3A1-206ENST00000471037 CSDC2Q9Y534 153 aaKnown RBP6.05□□□□□ -1.44
SF3A1-206ENST00000471037 A0A1B0GUV1 79 aa6.04□□□□□ -1.44
SF3A1-206ENST00000471037 IGIPA6NJ69 53 aa6.04□□□□□ -1.44
SF3A1-206ENST00000471037 GAGE6Q13070 117 aa6.04□□□□□ -1.44
SF3A1-206ENST00000471037 PAPPA-AS1Q5QFB9 102 aa6.04□□□□□ -1.44
SF3A1-206ENST00000471037 OR5A1Q8NGJ0 315 aa6.04□□□□□ -1.44
SF3A1-206ENST00000471037 TMEM101Q96IK0 257 aa6.04□□□□□ -1.44
SF3A1-206ENST00000471037 HIST1H2BLQ99880 126 aa6.04□□□□□ -1.44
SF3A1-206ENST00000471037 DNAH8Q96JB1 4490 aa6.04□□□□□ -1.44
SF3A1-206ENST00000471037 A0A087WX48 190 aa6.03□□□□□ -1.44
SF3A1-206ENST00000471037 IBA57-AS1B1ANH7 110 aa6.03□□□□□ -1.44
SF3A1-206ENST00000471037 TMEM262E9PQX1 116 aa6.03□□□□□ -1.44
SF3A1-206ENST00000471037 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.03□□□□□ -1.44
SF3A1-206ENST00000471037 PSCAO43653 123 aa6.03□□□□□ -1.44
SF3A1-206ENST00000471037 FABP4P15090 132 aa6.03□□□□□ -1.44
SF3A1-206ENST00000471037 MRPS36P82909 103 aaKnown RBP6.03□□□□□ -1.44
SF3A1-206ENST00000471037 LINC01556Q5JQF7 62 aa6.03□□□□□ -1.44
SF3A1-206ENST00000471037 DGAT2L7PQ6IED9 249 aa6.03□□□□□ -1.44
SF3A1-206ENST00000471037 Q6ZN92 141 aa6.03□□□□□ -1.44
SF3A1-206ENST00000471037 Q8N814 137 aa6.03□□□□□ -1.44
SF3A1-206ENST00000471037 IFI27L1Q96BM0 104 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms