RNA–Protein interactions for RNA: ENST00000470815.1

HERC3-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 4

Gene HERC3, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-208ENST00000470815 BAGE2Q86Y30 109 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 SMIM4Q8WVI0 70 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 C12orf57Q99622 126 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 MANBALQ9NQG1 85 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 LINC01558Q9Y6Z2 57 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 SSPOA2VEC9 5147 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 PZPP20742 1482 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 IFT172Q9UG01 1749 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 NWD2Q9ULI1 1742 aa0.16□□□□□ -2.38
HERC3-208ENST00000470815 SCAPERQ9BY12 1400 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 hADV29S1A0JD25 119 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 UQCR11O14957 56 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 SFT2D2O95562 160 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 SPINK1P00995 79 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 Q0VG73 95 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 WHAMMP3Q1A5X7 153 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 CGREF1Q99674 301 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 CDC42SE2Q9NRR3 84 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 ARL2-SNX15V9GYD0 113 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 PRDM2Q13029 1718 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 ZFYVE26Q68DK2 2539 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 MYH8P13535 1937 aa0.15□□□□□ -2.39
HERC3-208ENST00000470815 PIN1P1O15428 100 aa0.14□□□□□ -2.39
HERC3-208ENST00000470815 IGLC1P0CG04 106 aa0.14□□□□□ -2.39
HERC3-208ENST00000470815 Q6JHZ5 121 aa0.14□□□□□ -2.39
HERC3-208ENST00000470815 NXT2Q9NPJ8 142 aaKnown RBP0.14□□□□□ -2.39
HERC3-208ENST00000470815 PXDNQ92626 1479 aa0.14□□□□□ -2.39
HERC3-208ENST00000470815 ANKRD17O75179 2603 aaKnown RBP0.14□□□□□ -2.39
HERC3-208ENST00000470815 OTOGQ6ZRI0 2925 aa0.14□□□□□ -2.39
HERC3-208ENST00000470815 PSME4Q14997 1843 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 NEBP20929 6669 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 A0A0D9SFI3 127 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 LOC285095A0A1B0GVY8 99 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 TMEM218A2RU14 115 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 TMEM262E9PQX1 116 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 RBP2P50120 134 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 ATP5EP56381 51 aaPredicted RBP0.13□□□□□ -2.39
HERC3-208ENST00000470815 S100A10P60903 97 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 UBE2D3P61077 147 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 UBE2D2P62837 147 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 FAM223AQ8IWN6 122 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 FAM167A-AS1Q96KT0 104 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 CNFNQ9BYD5 112 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 UQCR10Q9UDW1 63 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 PRO0255Q9UI72 69 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 WDR7Q9Y4E6 1490 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 CUL7Q14999 1698 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 ZNF609O15014 1411 aa0.13□□□□□ -2.39
HERC3-208ENST00000470815 TRAV30A0A087WSZ9 112 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 NAP1L6A6NFF2 107 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 CRYM-AS1A6NIL9 109 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 H3BQ15 152 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 GNGT2O14610 69 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 MPC2O95563 127 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 APOC3P02656 99 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 MT-ATP8P03928 68 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 TRAPPC2P0DI81 140 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 TRAPPC2BP0DI82 140 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 UBA52P62987 128 aaKnown RBP0.12□□□□□ -2.39
HERC3-208ENST00000470815 SEC11AP67812 179 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 COX17Q14061 63 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 NCMAPQ5T1S8 102 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 LCN9Q8WX39 176 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 SPRR4Q96PI1 79 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 TCEAL7Q9BRU2 100 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 DOCK2Q92608 1830 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 MUC12Q9UKN1 5478 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 F8P00451 2351 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 LAMC1P11047 1609 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 CELSR2Q9HCU4 2923 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 ABCC5O15440 1437 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 NSD3Q9BZ95 1437 aa0.12□□□□□ -2.39
HERC3-208ENST00000470815 FAM223BA6NKX1 122 aa0.11□□□□□ -2.39
HERC3-208ENST00000470815 I3L2K1 104 aa0.11□□□□□ -2.39
HERC3-208ENST00000470815 C10orf113Q5VZT2 155 aa0.11□□□□□ -2.39
HERC3-208ENST00000470815 FDCSPQ8NFU4 85 aa0.11□□□□□ -2.39
HERC3-208ENST00000470815 TMEM263Q8WUH6 116 aaKnown RBP0.11□□□□□ -2.39
HERC3-208ENST00000470815 TP53AIP1Q9HCN2 124 aa0.11□□□□□ -2.39
HERC3-208ENST00000470815 PRO1854Q9UHT4 67 aa0.11□□□□□ -2.39
HERC3-208ENST00000470815 LRP6O75581 1613 aa0.11□□□□□ -2.39
HERC3-208ENST00000470815 PTPRZ1P23471 2315 aaPredicted RBP0.11□□□□□ -2.39
HERC3-208ENST00000470815 HMGXB3Q12766 1538 aa0.11□□□□□ -2.39
HERC3-208ENST00000470815 KDM5AP29375 1690 aaKnown RBP0.11□□□□□ -2.39
HERC3-208ENST00000470815 RIMS1Q86UR5 1692 aaKnown RBP0.11□□□□□ -2.39
HERC3-208ENST00000470815 ERCC6L2Q5T890 1561 aa0.11□□□□□ -2.39
HERC3-208ENST00000470815 PLXNB2O15031 1838 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 ANK2Q01484 3957 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 ARHGAP5Q13017 1502 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 A0A0G2JND7 137 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 MGPP08493 103 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 COX6CP09669 75 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 ASIPP42127 132 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 KRTDAPP60985 99 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 SPRR2GQ9BYE4 73 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 FAIMQ9NVQ4 179 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 CACFD1Q9UGQ2 172 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 SPCS1Q9Y6A9 102 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 KIF21AQ7Z4S6 1674 aa0.1□□□□□ -2.39
HERC3-208ENST00000470815 EIF4G3O43432 1585 aaKnown RBP0.1□□□□□ -2.39
HERC3-208ENST00000470815 ARHGEF5Q12774 1597 aa0.1□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms