RNA–Protein interactions for RNA: ENST00000470537.1

XRN1-208, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 2

Gene XRN1, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-208ENST00000470537 BIN3Q9NQY0 253 aa5.42□□□□□ -1.54
XRN1-208ENST00000470537 IGLV1-50A0A075B6I6 118 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 TRAV1-1A0A0B4J248 108 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 UMAD1C9J7I0 102 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 APCSP02743 223 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 IGLC6P0CF74 106 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 NTF3P20783 257 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 FOXI1Q12951 378 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 GAGE2BQ13066 116 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 C1orf137Q5JT78 98 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 SFT2D1Q8WV19 159 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 SMIM12Q96EX1 92 aa5.41□□□□□ -1.54
XRN1-208ENST00000470537 IGLV4-69A0A075B6H9 119 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 FXYD6-FXYD2A0A087WZ82 144 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 CCL25O15444 150 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 IFNA1P01562 189 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 GIPP09681 153 aaPredicted RBP5.4□□□□□ -1.54
XRN1-208ENST00000470537 MALP21145 153 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 RPL13AP40429 203 aaKnown RBP5.4□□□□□ -1.54
XRN1-208ENST00000470537 CAMPP49913 170 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 IFITM3Q01628 133 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 PRR4Q16378 134 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 CD164L2Q6UWJ8 174 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 C9orf62Q8N4C0 152 aa5.4□□□□□ -1.54
XRN1-208ENST00000470537 MUC2Q02817 5179 aa5.39□□□□□ -1.55
XRN1-208ENST00000470537 LINC00959A0A1B0GUT2 108 aa5.39□□□□□ -1.55
XRN1-208ENST00000470537 APOMO95445 188 aa5.39□□□□□ -1.55
XRN1-208ENST00000470537 RPL35P42766 123 aaKnown RBP5.39□□□□□ -1.55
XRN1-208ENST00000470537 UBE2D1P51668 147 aa5.39□□□□□ -1.55
XRN1-208ENST00000470537 SMAGPQ0VAQ4 97 aa5.39□□□□□ -1.55
XRN1-208ENST00000470537 TWIST1Q15672 202 aa5.39□□□□□ -1.55
XRN1-208ENST00000470537 KCNRGQ8N5I3 272 aa5.39□□□□□ -1.55
XRN1-208ENST00000470537 MBD3L1Q8WWY6 194 aa5.39□□□□□ -1.55
XRN1-208ENST00000470537 ALG5Q9Y673 324 aa5.39□□□□□ -1.55
XRN1-208ENST00000470537 C1orf196B1AJZ1 125 aa5.38□□□□□ -1.55
XRN1-208ENST00000470537 I3L3M4 83 aa5.38□□□□□ -1.55
XRN1-208ENST00000470537 PMCHP20382 165 aa5.38□□□□□ -1.55
XRN1-208ENST00000470537 C9orf116Q5BN46 136 aaPredicted RBP5.38□□□□□ -1.55
XRN1-208ENST00000470537 LYZL1Q6UWQ5 148 aa5.38□□□□□ -1.55
XRN1-208ENST00000470537 PRR26Q8N8Z3 221 aa5.38□□□□□ -1.55
XRN1-208ENST00000470537 CAMK2N2Q96S95 79 aa5.38□□□□□ -1.55
XRN1-208ENST00000470537 LPAP08519 4548 aa5.38□□□□□ -1.55
XRN1-208ENST00000470537 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.37□□□□□ -1.55
XRN1-208ENST00000470537 IGKV2-29A2NJV5 120 aaPredicted RBP5.37□□□□□ -1.55
XRN1-208ENST00000470537 H0Y9J4 135 aa5.37□□□□□ -1.55
XRN1-208ENST00000470537 TEX46H3BTG2 121 aa5.37□□□□□ -1.55
XRN1-208ENST00000470537 IGLV7-43P04211 117 aa5.37□□□□□ -1.55
XRN1-208ENST00000470537 GNG4P50150 75 aa5.37□□□□□ -1.55
XRN1-208ENST00000470537 FAM213BQ8TBF2 198 aa5.37□□□□□ -1.55
XRN1-208ENST00000470537 LINC00526Q96FQ7 95 aa5.37□□□□□ -1.55
XRN1-208ENST00000470537 MRAP2Q96G30 205 aa5.37□□□□□ -1.55
XRN1-208ENST00000470537 MANBALQ9NQG1 85 aa5.37□□□□□ -1.55
XRN1-208ENST00000470537 A0A087WZ39 114 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 A0A1W2PNN7 141 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 SDHAF1A6NFY7 115 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 F8WDY8 70 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 COX7A2LO14548 114 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 Q5BKY6 102 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 CENPWQ5EE01 88 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 Q6ZNX1 250 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 GATD1Q8NB37 220 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 NUP35Q8NFH5 326 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 C2orf48Q96LS8 159 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 IMMP2LQ96T52 175 aa5.36□□□□□ -1.55
XRN1-208ENST00000470537 C19orf71A6NCJ1 209 aa5.35□□□□□ -1.55
XRN1-208ENST00000470537 ESDP10768 282 aa5.35□□□□□ -1.55
XRN1-208ENST00000470537 CTRLP40313 264 aa5.35□□□□□ -1.55
XRN1-208ENST00000470537 CCL20P78556 96 aa5.35□□□□□ -1.55
XRN1-208ENST00000470537 RPL18AQ02543 176 aaKnown RBP5.35□□□□□ -1.55
XRN1-208ENST00000470537 C11orf52Q96A22 123 aa5.35□□□□□ -1.55
XRN1-208ENST00000470537 CNFNQ9BYD5 112 aa5.35□□□□□ -1.55
XRN1-208ENST00000470537 CDC42SE2Q9NRR3 84 aa5.35□□□□□ -1.55
XRN1-208ENST00000470537 A0A1B0GV50 99 aa5.34□□□□□ -1.55
XRN1-208ENST00000470537 ARPC5O15511 151 aa5.34□□□□□ -1.55
XRN1-208ENST00000470537 PDE6DO43924 150 aa5.34□□□□□ -1.55
XRN1-208ENST00000470537 BCL2P10415 239 aa5.34□□□□□ -1.55
XRN1-208ENST00000470537 TMEM241Q24JQ0 296 aa5.34□□□□□ -1.55
XRN1-208ENST00000470537 MRPL52Q86TS9 123 aaKnown RBP5.34□□□□□ -1.55
XRN1-208ENST00000470537 CARHSP1Q9Y2V2 147 aaKnown RBP5.34□□□□□ -1.55
XRN1-208ENST00000470537 TRBV6-5A0A0K0K1A5 114 aa5.33□□□□□ -1.56
XRN1-208ENST00000470537 BCL2L11O43521 198 aa5.33□□□□□ -1.56
XRN1-208ENST00000470537 PHF5AQ7RTV0 110 aaKnown RBP5.33□□□□□ -1.56
XRN1-208ENST00000470537 ST20Q9HBF5 79 aa5.33□□□□□ -1.56
XRN1-208ENST00000470537 CYTL1Q9NRR1 136 aa5.33□□□□□ -1.56
XRN1-208ENST00000470537 GNG13Q9P2W3 67 aa5.33□□□□□ -1.56
XRN1-208ENST00000470537 CSDC2Q9Y534 153 aaKnown RBP5.33□□□□□ -1.56
XRN1-208ENST00000470537 C7orf77A4D0Y5 90 aa5.32□□□□□ -1.56
XRN1-208ENST00000470537 G3V3Q6 166 aa5.32□□□□□ -1.56
XRN1-208ENST00000470537 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.32□□□□□ -1.56
XRN1-208ENST00000470537 MEF2BQ02080 365 aaPredicted RBP5.32□□□□□ -1.56
XRN1-208ENST00000470537 BORCS7Q96B45 105 aa5.32□□□□□ -1.56
XRN1-208ENST00000470537 RPL39LQ96EH5 51 aaKnown RBP5.32□□□□□ -1.56
XRN1-208ENST00000470537 PPP1R17O96001 155 aa5.31□□□□□ -1.56
XRN1-208ENST00000470537 UBE2BP63146 152 aa5.31□□□□□ -1.56
XRN1-208ENST00000470537 ZNF345Q14585 488 aa5.31□□□□□ -1.56
XRN1-208ENST00000470537 OR10D4PQ8NGN7 298 aa5.31□□□□□ -1.56
XRN1-208ENST00000470537 TMEM18Q96B42 140 aa5.31□□□□□ -1.56
XRN1-208ENST00000470537 RPP21Q9H633 154 aaKnown RBP5.31□□□□□ -1.56
XRN1-208ENST00000470537 MED9Q9NWA0 146 aa5.31□□□□□ -1.56
XRN1-208ENST00000470537 MRPL35Q9NZE8 188 aaKnown RBP5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms