RNA–Protein interactions for RNA: ENST00000470161.6

PCGF3-208, Transcript of polycomb group ring finger 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCGF3, Length 1,652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCGF3-208ENST00000470161 BAALCQ8WXS3 180 aa13.32□□□□□ -0.28
PCGF3-208ENST00000470161 TRBV7-3A0A075B6L6 115 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 NBDYA0A0U1RRE5 68 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 GAGE12JA6NER3 117 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 IGIPA6NJ69 53 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 HSBP1L1C9JCN9 74 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 RPL36AP83881 106 aaKnown RBP13.31□□□□□ -0.28
PCGF3-208ENST00000470161 GAGE1Q13065 139 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 GAGE4Q13068 117 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 GAGE5Q13069 117 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 GAGE13Q4V321 117 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 RPL36ALQ969Q0 106 aaKnown RBP13.31□□□□□ -0.28
PCGF3-208ENST00000470161 A0A087WX48 190 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 LINC01549A6NIU2 74 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 SIVA1O15304 175 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 Q6ZR54 194 aa13.31□□□□□ -0.28
PCGF3-208ENST00000470161 COTL1Q14019 142 aa13.3□□□□□ -0.28
PCGF3-208ENST00000470161 TTC32Q5I0X7 151 aa13.3□□□□□ -0.28
PCGF3-208ENST00000470161 MRPL35Q9NZE8 188 aaKnown RBP13.3□□□□□ -0.28
PCGF3-208ENST00000470161 TRAV12-1A0A0B4J245 112 aa13.29□□□□□ -0.28
PCGF3-208ENST00000470161 ATP6V0E2Q8NHE4 81 aa13.29□□□□□ -0.28
PCGF3-208ENST00000470161 TMEM141Q96I45 108 aa13.29□□□□□ -0.28
PCGF3-208ENST00000470161 TIMM17AQ99595 171 aa13.29□□□□□ -0.28
PCGF3-208ENST00000470161 CHCHD7Q9BUK0 85 aa13.29□□□□□ -0.28
PCGF3-208ENST00000470161 IGLC3P0DOY3 106 aa13.28□□□□□ -0.28
PCGF3-208ENST00000470161 UBE2D3P61077 147 aa13.28□□□□□ -0.28
PCGF3-208ENST00000470161 UBE2D2P62837 147 aa13.28□□□□□ -0.28
PCGF3-208ENST00000470161 C1orf134Q5TEV5 83 aa13.28□□□□□ -0.28
PCGF3-208ENST00000470161 ZC2HC1BQ5TFG8 222 aa13.28□□□□□ -0.28
PCGF3-208ENST00000470161 MIEN1Q9BRT3 115 aa13.28□□□□□ -0.28
PCGF3-208ENST00000470161 DPM2O94777 84 aa13.28□□□□□ -0.28
PCGF3-208ENST00000470161 IGKCP01834 107 aa13.28□□□□□ -0.28
PCGF3-208ENST00000470161 C14orf144Q96I85 54 aa13.28□□□□□ -0.28
PCGF3-208ENST00000470161 CHTOPQ9Y3Y2 248 aaKnown RBP13.28□□□□□ -0.28
PCGF3-208ENST00000470161 ANKRD39Q53RE8 183 aa13.27□□□□□ -0.29
PCGF3-208ENST00000470161 STPG4Q8N801 248 aa13.27□□□□□ -0.29
PCGF3-208ENST00000470161 OPRPNQ99935 248 aaPredicted RBP13.27□□□□□ -0.29
PCGF3-208ENST00000470161 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.26□□□□□ -0.29
PCGF3-208ENST00000470161 IGKV2-29A2NJV5 120 aaPredicted RBP13.26□□□□□ -0.29
PCGF3-208ENST00000470161 PRSS29PA6NIE9 313 aa13.26□□□□□ -0.29
PCGF3-208ENST00000470161 GTSF1LQ9H1H1 148 aa13.26□□□□□ -0.29
PCGF3-208ENST00000470161 F8VRH5 84 aa13.25□□□□□ -0.29
PCGF3-208ENST00000470161 TIRAPP58753 221 aa13.25□□□□□ -0.29
PCGF3-208ENST00000470161 DAZ4Q86SG3 579 aaKnown RBP13.25□□□□□ -0.29
PCGF3-208ENST00000470161 DAZ3Q9NR90 486 aaKnown RBP13.25□□□□□ -0.29
PCGF3-208ENST00000470161 UQCR10Q9UDW1 63 aa13.25□□□□□ -0.29
PCGF3-208ENST00000470161 TRAV8-6A0A0B4J262 113 aa13.24□□□□□ -0.29
PCGF3-208ENST00000470161 LINC00336Q6ZUF6 198 aa13.24□□□□□ -0.29
PCGF3-208ENST00000470161 PMVKQ15126 192 aa13.24□□□□□ -0.29
PCGF3-208ENST00000470161 TP73-AS1Q9UF72 201 aa13.24□□□□□ -0.29
PCGF3-208ENST00000470161 DNAH2Q9P225 4427 aa13.23□□□□□ -0.29
PCGF3-208ENST00000470161 IGLV4-3A0A075B6K6 122 aa13.23□□□□□ -0.29
PCGF3-208ENST00000470161 PLNP26678 52 aa13.23□□□□□ -0.29
PCGF3-208ENST00000470161 C6orf223Q8N319 242 aa13.23□□□□□ -0.29
PCGF3-208ENST00000470161 CST9LQ9H4G1 147 aa13.23□□□□□ -0.29
PCGF3-208ENST00000470161 NTM-AS1Q6ZSK4 140 aa13.22□□□□□ -0.29
PCGF3-208ENST00000470161 WFDC10BQ8IUB3 73 aa13.22□□□□□ -0.29
PCGF3-208ENST00000470161 LINC00694P0DN24 101 aa13.21□□□□□ -0.29
PCGF3-208ENST00000470161 LELP1Q5T871 98 aa13.21□□□□□ -0.29
PCGF3-208ENST00000470161 RTL8CO15255 209 aa13.21□□□□□ -0.3
PCGF3-208ENST00000470161 UBE2D4Q9Y2X8 147 aa13.21□□□□□ -0.3
PCGF3-208ENST00000470161 PYGO1Q9Y3Y4 419 aa13.21□□□□□ -0.3
PCGF3-208ENST00000470161 FAM104AQ969W3 186 aa13.2□□□□□ -0.3
PCGF3-208ENST00000470161 SPANXA1Q9NS26 97 aa13.2□□□□□ -0.3
PCGF3-208ENST00000470161 FRAS1Q86XX4 4008 aa13.19□□□□□ -0.3
PCGF3-208ENST00000470161 DNAH10Q8IVF4 4471 aa13.19□□□□□ -0.3
PCGF3-208ENST00000470161 IGLV4-69A0A075B6H9 119 aa13.19□□□□□ -0.3
PCGF3-208ENST00000470161 K7EP13 123 aa13.19□□□□□ -0.3
PCGF3-208ENST00000470161 KRTAP1-5Q9BYS1 174 aa13.19□□□□□ -0.3
PCGF3-208ENST00000470161 HNRNPA3P51991 378 aaKnown RBP13.18□□□□□ -0.3
PCGF3-208ENST00000470161 RNASE13Q5GAN3 156 aaKnown RBP13.18□□□□□ -0.3
PCGF3-208ENST00000470161 DNAH10OSP0CZ25 163 aa13.18□□□□□ -0.3
PCGF3-208ENST00000470161 COX8AP10176 69 aa13.18□□□□□ -0.3
PCGF3-208ENST00000470161 NMUP48645 174 aa13.18□□□□□ -0.3
PCGF3-208ENST00000470161 SLC25A34Q6PIV7 304 aa13.18□□□□□ -0.3
PCGF3-208ENST00000470161 VCX2Q9H322 139 aa13.18□□□□□ -0.3
PCGF3-208ENST00000470161 C11orf86A6NJI1 115 aa13.17□□□□□ -0.3
PCGF3-208ENST00000470161 Q6ZUT4 128 aa13.17□□□□□ -0.3
PCGF3-208ENST00000470161 C10orf126Q8N4M7 172 aa13.17□□□□□ -0.3
PCGF3-208ENST00000470161 IGKV2D-26A0A0A0MRZ7 120 aa13.16□□□□□ -0.3
PCGF3-208ENST00000470161 PAPPA-AS1Q5QFB9 102 aa13.16□□□□□ -0.3
PCGF3-208ENST00000470161 CTAG1AP78358 180 aa13.15□□□□□ -0.3
PCGF3-208ENST00000470161 AMELXQ99217 191 aa13.15□□□□□ -0.3
PCGF3-208ENST00000470161 TMEM243Q9BU79 118 aa13.15□□□□□ -0.3
PCGF3-208ENST00000470161 NPSP0C0P6 89 aa13.15□□□□□ -0.31
PCGF3-208ENST00000470161 TRBV25-1A0A075B6N4 114 aa13.14□□□□□ -0.31
PCGF3-208ENST00000470161 FGF6P10767 208 aa13.14□□□□□ -0.31
PCGF3-208ENST00000470161 LINC01556Q5JQF7 62 aa13.14□□□□□ -0.31
PCGF3-208ENST00000470161 PCP2Q8IVA1 136 aa13.14□□□□□ -0.31
PCGF3-208ENST00000470161 TIMM21Q9BVV7 248 aa13.14□□□□□ -0.31
PCGF3-208ENST00000470161 UBE2L6O14933 153 aa13.13□□□□□ -0.31
PCGF3-208ENST00000470161 DGAT2L7PQ6IED9 249 aa13.13□□□□□ -0.31
PCGF3-208ENST00000470161 CHAC1Q9BUX1 264 aa13.13□□□□□ -0.31
PCGF3-208ENST00000470161 IGHV3-30P01768 117 aa13.12□□□□□ -0.31
PCGF3-208ENST00000470161 IGHV3-33P01772 117 aa13.12□□□□□ -0.31
PCGF3-208ENST00000470161 IGHV3-30-3P0DP02 117 aa13.12□□□□□ -0.31
PCGF3-208ENST00000470161 IGHV3-30-5P0DP03 117 aa13.12□□□□□ -0.31
PCGF3-208ENST00000470161 NFE4Q86UQ8 179 aa13.12□□□□□ -0.31
PCGF3-208ENST00000470161 TRBV6-8A0A0A6YYG3 113 aa13.12□□□□□ -0.31
PCGF3-208ENST00000470161 A0A0J9YXV3 536 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms