RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 FAM236DA0A1B0GTK5 79 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 FAM236CP0DP71 79 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 DEFB114Q30KQ6 69 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 MYLKQ15746 1914 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 FLNCQ14315 2725 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 LST1O00453 97 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 TCL1BO95988 128 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 PCP2Q8IVA1 136 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 C16orf95Q9H693 158 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 A0A0J9YY99 117 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 A0A0U1RRA0 63 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 GATA1P15976 413 aaPredicted RBP4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 CFHR3Q02985 330 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 C2orf48Q96LS8 159 aa4.6□□□□□ -1.67
CCDC144A-212ENST00000470068 TRBV6-8A0A0A6YYG3 113 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 POLR2KP53803 58 aaKnown RBP4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 EGFEM1PQ0D2K5 195 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 PLXNB3Q9ULL4 1909 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 LOC107984640A0A0U1RRK4 108 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 LINC01546A6NGU7 62 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 IGLV1-40P01703 118 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 NDUFV3P56181 108 aaKnown RBP4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 C1orf229Q6ZS94 237 aaPredicted RBP4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 LINC00308Q8TCZ7 52 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 COL5A1P20908 1838 aaPredicted RBP4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 FAM236AA0A1B0GUQ0 79 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 FAM236BA0A1B0GV22 79 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 M0QY20 66 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 TFF1P04155 84 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 ZNF22P17026 224 aaPredicted RBP4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 ZNF581Q9P0T4 197 aa4.59□□□□□ -1.67
CCDC144A-212ENST00000470068 SMIM26A0A096LP01 95 aa4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 IGHV3-33P01772 117 aa4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 RPL18AQ02543 176 aaKnown RBP4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 MIR7-3HGQ8N6C7 128 aa4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 Q8N976 141 aa4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 C7orf33Q8WU49 177 aa4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 TP53TG3Q9ULZ0 132 aa4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 IGLV4-3A0A075B6K6 122 aa4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 FXYD2P54710 66 aa4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 FXYD7P58549 80 aa4.59□□□□□ -1.68
CCDC144A-212ENST00000470068 TRAV7A0A075B6U4 112 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 LECT2O14960 151 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 KLK9Q2XQG4 91 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 TRAV26-2A0A0B4J265 109 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 TMEM131Q92545 1883 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 IGKV2-29A2NJV5 120 aaPredicted RBP4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 NUPR2A6NF83 97 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 NCKAP5O14513 1909 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 COX7CP15954 63 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 RPL28P46779 137 aaKnown RBP4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 REG3AQ06141 175 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 SEM1Q6ZVN7 128 aa4.58□□□□□ -1.68
CCDC144A-212ENST00000470068 DSCAMO60469 2012 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 KRTAP21-3Q3LHN1 58 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 COL4A3Q01955 1670 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 TRAV12-2A0A075B6T6 113 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 IGKV1OR2-108A0A075B7D4 117 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 A0A1B0GUV1 79 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 E7EUB6 86 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 H3BNG1 76 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 IGFL4Q6B9Z1 124 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 RPL39LQ96EH5 51 aaKnown RBP4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 ZNF80P51504 273 aaPredicted RBP4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 DENND4CQ5VZ89 1909 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 KIAA1549LQ6ZVL6 1849 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 WFDC9Q8NEX5 89 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 SERP1Q9Y6X1 66 aa4.57□□□□□ -1.68
CCDC144A-212ENST00000470068 COL6A5A8TX70 2615 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 SYCNQ0VAF6 134 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 BEAN1Q3B7T3 259 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 FAM19A3Q7Z5A8 133 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 CYSRT1A8MQ03 144 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 WIPF1O43516 503 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 C11orf45Q8TAV5 145 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 ZNF625Q96I27 306 aaPredicted RBP4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 KMT2EQ8IZD2 1858 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 IGLV2-18A0A075B6J9 118 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 C5orf38Q86SI9 138 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 C17orf77Q96MU5 243 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 FAM229AH3BQW9 127 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 PRYO14603 147 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 IGHV3-30P01768 117 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 IGHV3-30-5P0DP03 117 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 BLCAPP62952 87 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 CFAP126Q5VTH2 177 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 FANCMQ8IYD8 2048 aa4.56□□□□□ -1.68
CCDC144A-212ENST00000470068 USP17L23D6RBM5 183 aa4.55□□□□□ -1.68
CCDC144A-212ENST00000470068 CHCHD10Q8WYQ3 142 aaPredicted RBP4.55□□□□□ -1.68
CCDC144A-212ENST00000470068 OBSL1O75147 1896 aa4.55□□□□□ -1.68
CCDC144A-212ENST00000470068 TRAV23DV6A0A075B6W5 121 aa4.55□□□□□ -1.68
CCDC144A-212ENST00000470068 VPREB1P12018 145 aa4.55□□□□□ -1.68
CCDC144A-212ENST00000470068 SLURP1P55000 103 aa4.55□□□□□ -1.68
CCDC144A-212ENST00000470068 A0A087WZ39 114 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 F8W735 103 aaPredicted RBP4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 IGHV4-38-2P0DP08 117 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 LINC00205P59089 165 aa4.54□□□□□ -1.68
CCDC144A-212ENST00000470068 APRG1Q8IVJ8 170 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms