RNA–Protein interactions for RNA: ENST00000469443.2

PHGDH-204, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 653 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-204ENST00000469443 PPP1R2P9O14990 202 aa11.76□□□□□ -0.53
PHGDH-204ENST00000469443 MRPL51Q4U2R6 128 aaKnown RBP11.76□□□□□ -0.53
PHGDH-204ENST00000469443 SDIM1Q6ZPB5 146 aa11.76□□□□□ -0.53
PHGDH-204ENST00000469443 MRPL52Q86TS9 123 aaKnown RBP11.76□□□□□ -0.53
PHGDH-204ENST00000469443 C15orf56Q8N910 161 aa11.76□□□□□ -0.53
PHGDH-204ENST00000469443 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-204ENST00000469443 FCER1GP30273 86 aa11.75□□□□□ -0.53
PHGDH-204ENST00000469443 LINC00862A6NCI5 91 aa11.74□□□□□ -0.53
PHGDH-204ENST00000469443 SLPIP03973 132 aa11.74□□□□□ -0.53
PHGDH-204ENST00000469443 S100A8P05109 93 aa11.74□□□□□ -0.53
PHGDH-204ENST00000469443 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.74□□□□□ -0.53
PHGDH-204ENST00000469443 IGHV3-64A0A075B6Q5 118 aa11.73□□□□□ -0.53
PHGDH-204ENST00000469443 LINC00959A0A1B0GUT2 108 aa11.73□□□□□ -0.53
PHGDH-204ENST00000469443 CKS2P33552 79 aa11.73□□□□□ -0.53
PHGDH-204ENST00000469443 RAB14P61106 215 aa11.73□□□□□ -0.53
PHGDH-204ENST00000469443 HBBP68871 147 aa11.73□□□□□ -0.53
PHGDH-204ENST00000469443 MRPL54Q6P161 138 aaKnown RBP11.73□□□□□ -0.53
PHGDH-204ENST00000469443 KIR2DL4Q99706 377 aa11.73□□□□□ -0.53
PHGDH-204ENST00000469443 CDC42SE2Q9NRR3 84 aa11.73□□□□□ -0.53
PHGDH-204ENST00000469443 A0A1B0GXF2 115 aa11.72□□□□□ -0.53
PHGDH-204ENST00000469443 FOXI1Q12951 378 aa11.72□□□□□ -0.53
PHGDH-204ENST00000469443 C20orf78Q9BR46 151 aa11.72□□□□□ -0.53
PHGDH-204ENST00000469443 TRBV24-1A0A075B6N3 115 aa11.71□□□□□ -0.53
PHGDH-204ENST00000469443 F8W036 122 aa11.71□□□□□ -0.53
PHGDH-204ENST00000469443 PANO1I0J062 215 aa11.71□□□□□ -0.53
PHGDH-204ENST00000469443 CCL25O15444 150 aa11.71□□□□□ -0.53
PHGDH-204ENST00000469443 XCL1P47992 114 aa11.71□□□□□ -0.53
PHGDH-204ENST00000469443 HIGD2BQ4VC39 106 aa11.71□□□□□ -0.53
PHGDH-204ENST00000469443 ZNF664Q8N3J9 261 aa11.71□□□□□ -0.53
PHGDH-204ENST00000469443 GVQW2A0A096LPI5 108 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-204ENST00000469443 KRTAP10-4P60372 401 aaPredicted RBP11.7□□□□□ -0.54
PHGDH-204ENST00000469443 RPL32P62910 135 aaKnown RBP11.7□□□□□ -0.54
PHGDH-204ENST00000469443 SMAGPQ0VAQ4 97 aa11.7□□□□□ -0.54
PHGDH-204ENST00000469443 CIRBPQ14011 172 aaKnown RBP11.7□□□□□ -0.54
PHGDH-204ENST00000469443 SS18Q15532 418 aa11.7□□□□□ -0.54
PHGDH-204ENST00000469443 CSDC2Q9Y534 153 aaKnown RBP11.7□□□□□ -0.54
PHGDH-204ENST00000469443 D6R8Y8 96 aa11.69□□□□□ -0.54
PHGDH-204ENST00000469443 TNFRSF6BO95407 300 aa11.69□□□□□ -0.54
PHGDH-204ENST00000469443 ATP5L2Q7Z4Y8 100 aa11.69□□□□□ -0.54
PHGDH-204ENST00000469443 UBE2D4Q9Y2X8 147 aa11.69□□□□□ -0.54
PHGDH-204ENST00000469443 HERC1Q15751 4861 aa11.69□□□□□ -0.54
PHGDH-204ENST00000469443 TCAPO15273 167 aa11.68□□□□□ -0.54
PHGDH-204ENST00000469443 PNRC1Q12796 327 aaPredicted RBP11.68□□□□□ -0.54
PHGDH-204ENST00000469443 TMEM18Q96B42 140 aa11.68□□□□□ -0.54
PHGDH-204ENST00000469443 CD164L2Q6UWJ8 174 aa11.67□□□□□ -0.54
PHGDH-204ENST00000469443 TIMM21Q9BVV7 248 aa11.67□□□□□ -0.54
PHGDH-204ENST00000469443 SMIM2Q9BVW6 85 aa11.67□□□□□ -0.54
PHGDH-204ENST00000469443 IGHV1-58A0A0C4DH39 117 aa11.66□□□□□ -0.54
PHGDH-204ENST00000469443 PHOX2AO14813 284 aa11.66□□□□□ -0.54
PHGDH-204ENST00000469443 NPYP01303 97 aa11.66□□□□□ -0.54
PHGDH-204ENST00000469443 PPBPP02775 128 aa11.66□□□□□ -0.54
PHGDH-204ENST00000469443 MT-ND4LP03901 98 aa11.65□□□□□ -0.54
PHGDH-204ENST00000469443 CHTF8P0CG12 524 aa11.65□□□□□ -0.54
PHGDH-204ENST00000469443 RPL37AP61513 92 aaKnown RBP11.65□□□□□ -0.54
PHGDH-204ENST00000469443 CLLU1Q5K131 121 aa11.65□□□□□ -0.54
PHGDH-204ENST00000469443 ANAPC16Q96DE5 110 aa11.65□□□□□ -0.54
PHGDH-204ENST00000469443 C1orf196B1AJZ1 125 aa11.64□□□□□ -0.55
PHGDH-204ENST00000469443 COX6A2Q02221 97 aa11.64□□□□□ -0.55
PHGDH-204ENST00000469443 RNASE13Q5GAN3 156 aaKnown RBP11.64□□□□□ -0.55
PHGDH-204ENST00000469443 ORMDL3Q8N138 153 aa11.64□□□□□ -0.55
PHGDH-204ENST00000469443 SPACA4Q8TDM5 124 aa11.64□□□□□ -0.55
PHGDH-204ENST00000469443 DPH3Q96FX2 82 aa11.64□□□□□ -0.55
PHGDH-204ENST00000469443 Q6ZUT4 128 aa11.63□□□□□ -0.55
PHGDH-204ENST00000469443 A0A087WYN8 130 aa11.62□□□□□ -0.55
PHGDH-204ENST00000469443 RPL39P62891 51 aaKnown RBP11.62□□□□□ -0.55
PHGDH-204ENST00000469443 TMEM136Q6ZRR5 245 aa11.62□□□□□ -0.55
PHGDH-204ENST00000469443 PKHD1L1Q86WI1 4243 aa11.61□□□□□ -0.55
PHGDH-204ENST00000469443 TRAV13-1A0A0B4J241 112 aa11.61□□□□□ -0.55
PHGDH-204ENST00000469443 KRTAP29-1A8MX34 341 aaPredicted RBP11.61□□□□□ -0.55
PHGDH-204ENST00000469443 J3QL48 77 aa11.61□□□□□ -0.55
PHGDH-204ENST00000469443 PRSS3P2Q8NHM4 247 aa11.61□□□□□ -0.55
PHGDH-204ENST00000469443 PRELID3AQ96N28 172 aa11.61□□□□□ -0.55
PHGDH-204ENST00000469443 ZNF561-AS1K7EIQ3 104 aa11.6□□□□□ -0.55
PHGDH-204ENST00000469443 COX7A2LO14548 114 aa11.6□□□□□ -0.55
PHGDH-204ENST00000469443 LINC00526Q96FQ7 95 aa11.6□□□□□ -0.55
PHGDH-204ENST00000469443 SPANXA1Q9NS26 97 aa11.6□□□□□ -0.55
PHGDH-204ENST00000469443 PLAC8Q9NZF1 115 aa11.6□□□□□ -0.55
PHGDH-204ENST00000469443 MALP21145 153 aa11.59□□□□□ -0.55
PHGDH-204ENST00000469443 CARD19Q96LW7 228 aa11.59□□□□□ -0.55
PHGDH-204ENST00000469443 LRP1Q07954 4544 aaKnown RBP11.58□□□□□ -0.56
PHGDH-204ENST00000469443 IGKV2-24A0A0C4DH68 120 aa11.58□□□□□ -0.56
PHGDH-204ENST00000469443 MAJINQ3KP22 176 aa11.58□□□□□ -0.56
PHGDH-204ENST00000469443 FAM104AQ969W3 186 aa11.58□□□□□ -0.56
PHGDH-204ENST00000469443 PKIGQ9Y2B9 76 aa11.58□□□□□ -0.56
PHGDH-204ENST00000469443 LAMTOR2Q9Y2Q5 125 aa11.58□□□□□ -0.56
PHGDH-204ENST00000469443 RAB5AP20339 215 aa11.57□□□□□ -0.56
PHGDH-204ENST00000469443 MRPS36P82909 103 aaKnown RBP11.57□□□□□ -0.56
PHGDH-204ENST00000469443 IFITM2Q01629 132 aa11.57□□□□□ -0.56
PHGDH-204ENST00000469443 SYCNQ0VAF6 134 aa11.57□□□□□ -0.56
PHGDH-204ENST00000469443 FAT3Q8TDW7 4589 aa11.57□□□□□ -0.56
PHGDH-204ENST00000469443 A0A096LNI7 61 aa11.56□□□□□ -0.56
PHGDH-204ENST00000469443 PRSS47A8MTI9 375 aa11.56□□□□□ -0.56
PHGDH-204ENST00000469443 UQCC3Q6UW78 93 aa11.56□□□□□ -0.56
PHGDH-204ENST00000469443 C5orf38Q86SI9 138 aa11.56□□□□□ -0.56
PHGDH-204ENST00000469443 IGLV4-69A0A075B6H9 119 aa11.55□□□□□ -0.56
PHGDH-204ENST00000469443 OPRPNQ99935 248 aaPredicted RBP11.55□□□□□ -0.56
PHGDH-204ENST00000469443 MAP1LC3AQ9H492 121 aa11.55□□□□□ -0.56
PHGDH-204ENST00000469443 TMEM218A2RU14 115 aa11.54□□□□□ -0.56
PHGDH-204ENST00000469443 APOMO95445 188 aa11.54□□□□□ -0.56
PHGDH-204ENST00000469443 ADCYAP1P18509 176 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms