RNA–Protein interactions for RNA: ENST00000469163.1

NUP50-214, Transcript of nucleoporin 50, humanhuman

TSL 2

Gene NUP50, Length 3,507 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-214ENST00000469163 PSMB8P28062 276 aa7.44□□□□□ -1.22
NUP50-214ENST00000469163 FP248Q71RG6 208 aaPredicted RBP7.44□□□□□ -1.22
NUP50-214ENST00000469163 MUSTN1Q8IVN3 82 aa7.44□□□□□ -1.22
NUP50-214ENST00000469163 SLC25A29Q8N8R3 303 aa7.44□□□□□ -1.22
NUP50-214ENST00000469163 Q8TAT8 98 aa7.44□□□□□ -1.22
NUP50-214ENST00000469163 LGALS3P17931 250 aaKnown RBP7.43□□□□□ -1.22
NUP50-214ENST00000469163 EIF4EBP1Q13541 118 aaPredicted RBP7.43□□□□□ -1.22
NUP50-214ENST00000469163 MINOS1Q5TGZ0 78 aa7.43□□□□□ -1.22
NUP50-214ENST00000469163 C18orf65Q6ZTR6 163 aa7.43□□□□□ -1.22
NUP50-214ENST00000469163 C8orf49Q96NF6 230 aa7.43□□□□□ -1.22
NUP50-214ENST00000469163 MINOS1-NBL1R4GNA1 71 aa7.43□□□□□ -1.22
NUP50-214ENST00000469163 MRPL55Q7Z7F7 128 aaKnown RBP7.43□□□□□ -1.22
NUP50-214ENST00000469163 C16orf95Q9H693 158 aa7.43□□□□□ -1.22
NUP50-214ENST00000469163 NSD1Q96L73 2696 aaPredicted RBP7.43□□□□□ -1.22
NUP50-214ENST00000469163 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.43□□□□□ -1.22
NUP50-214ENST00000469163 DSCR9P59020 149 aa7.43□□□□□ -1.22
NUP50-214ENST00000469163 SNRPD3P62318 126 aaKnown RBP7.43□□□□□ -1.22
NUP50-214ENST00000469163 ICOSQ9Y6W8 199 aa7.43□□□□□ -1.22
NUP50-214ENST00000469163 TRAV26-2A0A0B4J265 109 aa7.42□□□□□ -1.22
NUP50-214ENST00000469163 CRIP1P50238 77 aa7.42□□□□□ -1.22
NUP50-214ENST00000469163 CD164Q04900 197 aa7.42□□□□□ -1.22
NUP50-214ENST00000469163 TRBV30A0A0K0K1B3 111 aa7.42□□□□□ -1.22
NUP50-214ENST00000469163 TRBV19A0A075B6N1 114 aa7.41□□□□□ -1.22
NUP50-214ENST00000469163 RBMY1BA6NDE4 496 aaKnown RBP7.41□□□□□ -1.22
NUP50-214ENST00000469163 RBMY1EA6NEQ0 496 aaKnown RBP7.41□□□□□ -1.22
NUP50-214ENST00000469163 FAM223BA6NKX1 122 aa7.41□□□□□ -1.22
NUP50-214ENST00000469163 TEX22C9J3V5 150 aa7.41□□□□□ -1.22
NUP50-214ENST00000469163 RBMY1DP0C7P1 496 aaKnown RBP7.41□□□□□ -1.22
NUP50-214ENST00000469163 RBMY1A1P0DJD3 496 aaKnown RBP7.41□□□□□ -1.22
NUP50-214ENST00000469163 RBMY1CP0DJD4 496 aa7.41□□□□□ -1.22
NUP50-214ENST00000469163 RBMY1FQ15415 496 aaKnown RBP7.41□□□□□ -1.22
NUP50-214ENST00000469163 TMEM30BQ3MIR4 351 aa7.41□□□□□ -1.22
NUP50-214ENST00000469163 DEFB121Q5J5C9 76 aa7.41□□□□□ -1.22
NUP50-214ENST00000469163 NDUFC2-KCTD14E9PQ53 114 aa7.41□□□□□ -1.22
NUP50-214ENST00000469163 EIF4EBP3O60516 100 aaPredicted RBP7.41□□□□□ -1.22
NUP50-214ENST00000469163 APRG1Q8IVJ8 170 aa7.41□□□□□ -1.22
NUP50-214ENST00000469163 IGHV3-64A0A075B6Q5 118 aa7.4□□□□□ -1.22
NUP50-214ENST00000469163 IGKV2-40A0A087WW87 121 aaPredicted RBP7.4□□□□□ -1.22
NUP50-214ENST00000469163 TRAV12-1A0A0B4J245 112 aa7.4□□□□□ -1.22
NUP50-214ENST00000469163 F6UB75 175 aa7.4□□□□□ -1.22
NUP50-214ENST00000469163 IGKV2D-40P01614 121 aaPredicted RBP7.4□□□□□ -1.22
NUP50-214ENST00000469163 TIMM21Q9BVV7 248 aa7.4□□□□□ -1.22
NUP50-214ENST00000469163 LY6G6DO95868 133 aa7.4□□□□□ -1.22
NUP50-214ENST00000469163 IGLV2-11P01706 119 aa7.4□□□□□ -1.22
NUP50-214ENST00000469163 RNF185Q96GF1 192 aa7.4□□□□□ -1.22
NUP50-214ENST00000469163 UNQ9165/PRO28630Q6UXU0 137 aa7.4□□□□□ -1.23
NUP50-214ENST00000469163 C5orf56Q8N8D9 126 aa7.4□□□□□ -1.23
NUP50-214ENST00000469163 ODF3BA8MYP8 253 aa7.39□□□□□ -1.23
NUP50-214ENST00000469163 GHRHP01286 108 aa7.39□□□□□ -1.23
NUP50-214ENST00000469163 IGHG2P01859 326 aa7.39□□□□□ -1.23
NUP50-214ENST00000469163 DYNLRB2Q8TF09 96 aa7.39□□□□□ -1.23
NUP50-214ENST00000469163 TMEM223A0PJW6 202 aa7.39□□□□□ -1.23
NUP50-214ENST00000469163 K7EIM0 57 aa7.39□□□□□ -1.23
NUP50-214ENST00000469163 TENM1Q9UKZ4 2725 aa7.39□□□□□ -1.23
NUP50-214ENST00000469163 SLURP1P55000 103 aa7.39□□□□□ -1.23
NUP50-214ENST00000469163 SOSTDC1Q6X4U4 206 aa7.39□□□□□ -1.23
NUP50-214ENST00000469163 C11orf86A6NJI1 115 aa7.38□□□□□ -1.23
NUP50-214ENST00000469163 IGKV1-17P01599 117 aa7.38□□□□□ -1.23
NUP50-214ENST00000469163 DAZ2Q13117 558 aaKnown RBP7.38□□□□□ -1.23
NUP50-214ENST00000469163 DAZ3Q9NR90 486 aaKnown RBP7.38□□□□□ -1.23
NUP50-214ENST00000469163 LST1O00453 97 aa7.38□□□□□ -1.23
NUP50-214ENST00000469163 PAX4O43316 350 aa7.38□□□□□ -1.23
NUP50-214ENST00000469163 TSPEAR-AS2P59090 65 aa7.38□□□□□ -1.23
NUP50-214ENST00000469163 Q6ZSV7 163 aa7.38□□□□□ -1.23
NUP50-214ENST00000469163 FANCD2OSQ96PS1 177 aa7.38□□□□□ -1.23
NUP50-214ENST00000469163 TMEM75Q8N9X5 138 aa7.38□□□□□ -1.23
NUP50-214ENST00000469163 DNAL4O96015 105 aa7.37□□□□□ -1.23
NUP50-214ENST00000469163 PF4P02776 101 aa7.37□□□□□ -1.23
NUP50-214ENST00000469163 LINC01600Q96MT4 127 aa7.37□□□□□ -1.23
NUP50-214ENST00000469163 DNAJC9-AS1A6NH13 148 aa7.37□□□□□ -1.23
NUP50-214ENST00000469163 LINC00574Q9H8X3 128 aa7.37□□□□□ -1.23
NUP50-214ENST00000469163 TRAV23DV6A0A075B6W5 121 aa7.36□□□□□ -1.23
NUP50-214ENST00000469163 GP9P14770 177 aa7.36□□□□□ -1.23
NUP50-214ENST00000469163 XCL1P47992 114 aa7.36□□□□□ -1.23
NUP50-214ENST00000469163 XCL2Q9UBD3 114 aa7.36□□□□□ -1.23
NUP50-214ENST00000469163 EGR2P11161 476 aaPredicted RBP7.36□□□□□ -1.23
NUP50-214ENST00000469163 C2orf66Q6UXQ4 117 aa7.36□□□□□ -1.23
NUP50-214ENST00000469163 COPS9Q8WXC6 57 aa7.36□□□□□ -1.23
NUP50-214ENST00000469163 VWFP04275 2813 aa7.35□□□□□ -1.23
NUP50-214ENST00000469163 IGLV2-18A0A075B6J9 118 aa7.35□□□□□ -1.23
NUP50-214ENST00000469163 I3L3M4 83 aa7.35□□□□□ -1.23
NUP50-214ENST00000469163 CTSGP08311 255 aa7.35□□□□□ -1.23
NUP50-214ENST00000469163 RHPN1-AS1Q9BWJ2 59 aa7.35□□□□□ -1.23
NUP50-214ENST00000469163 I3L2K1 104 aa7.35□□□□□ -1.23
NUP50-214ENST00000469163 FSTL3O95633 263 aa7.35□□□□□ -1.23
NUP50-214ENST00000469163 TRBV7-6A0A0J9YX20 115 aa7.34□□□□□ -1.23
NUP50-214ENST00000469163 LINC01546A6NGU7 62 aa7.34□□□□□ -1.23
NUP50-214ENST00000469163 S100A4P26447 101 aaKnown RBP7.34□□□□□ -1.23
NUP50-214ENST00000469163 DCANP1Q8TF63 244 aa7.34□□□□□ -1.23
NUP50-214ENST00000469163 ZNF491Q8N8L2 437 aa7.34□□□□□ -1.23
NUP50-214ENST00000469163 C11orf45Q8TAV5 145 aa7.34□□□□□ -1.23
NUP50-214ENST00000469163 IGKV1D-37A0A075B6S9 117 aa7.34□□□□□ -1.24
NUP50-214ENST00000469163 ADARB2-AS1A8MUL3 147 aa7.34□□□□□ -1.24
NUP50-214ENST00000469163 A8MZ25 164 aa7.33□□□□□ -1.24
NUP50-214ENST00000469163 CCKP06307 115 aa7.33□□□□□ -1.24
NUP50-214ENST00000469163 SNURFQ9Y675 71 aa7.33□□□□□ -1.24
NUP50-214ENST00000469163 BAALC-AS2P0C853 105 aa7.33□□□□□ -1.24
NUP50-214ENST00000469163 CD28P10747 220 aa7.33□□□□□ -1.24
NUP50-214ENST00000469163 HILS1P60008 231 aa7.33□□□□□ -1.24
NUP50-214ENST00000469163 ESM1Q9NQ30 184 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms