RNA–Protein interactions for RNA: ENST00000467553.2

CCHCR1-211, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 589 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-211ENST00000467553 TNFRSF6BO95407 300 aa9.17□□□□□ -0.94
CCHCR1-211ENST00000467553 ATP5L2Q7Z4Y8 100 aa9.17□□□□□ -0.94
CCHCR1-211ENST00000467553 KIR2DL4Q99706 377 aa9.17□□□□□ -0.94
CCHCR1-211ENST00000467553 C7orf77A4D0Y5 90 aa9.16□□□□□ -0.94
CCHCR1-211ENST00000467553 J3QL48 77 aa9.16□□□□□ -0.94
CCHCR1-211ENST00000467553 ZNF25P17030 456 aaPredicted RBP9.16□□□□□ -0.94
CCHCR1-211ENST00000467553 COMMD7Q86VX2 200 aa9.16□□□□□ -0.94
CCHCR1-211ENST00000467553 LINC00528Q8N1L1 170 aa9.16□□□□□ -0.94
CCHCR1-211ENST00000467553 OR5A1Q8NGJ0 315 aa9.16□□□□□ -0.94
CCHCR1-211ENST00000467553 C20orf78Q9BR46 151 aa9.16□□□□□ -0.94
CCHCR1-211ENST00000467553 TRBV24-1A0A075B6N3 115 aa9.15□□□□□ -0.94
CCHCR1-211ENST00000467553 GAGE12HA6NDE8 117 aa9.15□□□□□ -0.94
CCHCR1-211ENST00000467553 KRTAP29-1A8MX34 341 aaPredicted RBP9.15□□□□□ -0.94
CCHCR1-211ENST00000467553 PRSS1P07477 247 aa9.15□□□□□ -0.94
CCHCR1-211ENST00000467553 ADCYAP1P18509 176 aa9.15□□□□□ -0.94
CCHCR1-211ENST00000467553 DGAT2L7PQ6IED9 249 aa9.15□□□□□ -0.94
CCHCR1-211ENST00000467553 TMEM136Q6ZRR5 245 aa9.15□□□□□ -0.94
CCHCR1-211ENST00000467553 NPYP01303 97 aa9.14□□□□□ -0.95
CCHCR1-211ENST00000467553 PPBPP02775 128 aa9.14□□□□□ -0.95
CCHCR1-211ENST00000467553 CHAC1Q9BUX1 264 aa9.14□□□□□ -0.95
CCHCR1-211ENST00000467553 ORMDL3Q8N138 153 aa9.13□□□□□ -0.95
CCHCR1-211ENST00000467553 CLRN3Q8NCR9 226 aa9.13□□□□□ -0.95
CCHCR1-211ENST00000467553 CHCHD10Q8WYQ3 142 aaPredicted RBP9.13□□□□□ -0.95
CCHCR1-211ENST00000467553 PRELID3AQ96N28 172 aa9.13□□□□□ -0.95
CCHCR1-211ENST00000467553 SEC11CQ9BY50 192 aa9.13□□□□□ -0.95
CCHCR1-211ENST00000467553 hDV102S1A0JD36 115 aa9.12□□□□□ -0.95
CCHCR1-211ENST00000467553 RPL32P62910 135 aaKnown RBP9.12□□□□□ -0.95
CCHCR1-211ENST00000467553 SCXQ7RTU7 201 aa9.12□□□□□ -0.95
CCHCR1-211ENST00000467553 MRPL52Q86TS9 123 aaKnown RBP9.12□□□□□ -0.95
CCHCR1-211ENST00000467553 ZNF664Q8N3J9 261 aa9.12□□□□□ -0.95
CCHCR1-211ENST00000467553 TMEM18Q96B42 140 aa9.12□□□□□ -0.95
CCHCR1-211ENST00000467553 SMIM2Q9BVW6 85 aa9.12□□□□□ -0.95
CCHCR1-211ENST00000467553 CTDSP1Q9GZU7 261 aa9.12□□□□□ -0.95
CCHCR1-211ENST00000467553 CDC42SE2Q9NRR3 84 aa9.12□□□□□ -0.95
CCHCR1-211ENST00000467553 LINC00959A0A1B0GUT2 108 aa9.11□□□□□ -0.95
CCHCR1-211ENST00000467553 PHOX2AO14813 284 aa9.11□□□□□ -0.95
CCHCR1-211ENST00000467553 TCAPO15273 167 aa9.11□□□□□ -0.95
CCHCR1-211ENST00000467553 SMAGPQ0VAQ4 97 aa9.11□□□□□ -0.95
CCHCR1-211ENST00000467553 IMMP2LQ96T52 175 aa9.11□□□□□ -0.95
CCHCR1-211ENST00000467553 LOC389332A0A1B0GUA5 103 aa9.1□□□□□ -0.95
CCHCR1-211ENST00000467553 XCL1P47992 114 aa9.1□□□□□ -0.95
CCHCR1-211ENST00000467553 SS18Q15532 418 aa9.1□□□□□ -0.95
CCHCR1-211ENST00000467553 CFAP161Q6P656 301 aa9.1□□□□□ -0.95
CCHCR1-211ENST00000467553 AP5S1Q9NUS5 200 aa9.1□□□□□ -0.95
CCHCR1-211ENST00000467553 UBE2D4Q9Y2X8 147 aa9.1□□□□□ -0.95
CCHCR1-211ENST00000467553 CCL25O15444 150 aa9.09□□□□□ -0.95
CCHCR1-211ENST00000467553 RAB5AP20339 215 aa9.09□□□□□ -0.95
CCHCR1-211ENST00000467553 RPL39P62891 51 aaKnown RBP9.09□□□□□ -0.95
CCHCR1-211ENST00000467553 RNASE13Q5GAN3 156 aaKnown RBP9.09□□□□□ -0.95
CCHCR1-211ENST00000467553 PKHD1L1Q86WI1 4243 aa9.08□□□□□ -0.96
CCHCR1-211ENST00000467553 OXTP01178 125 aa9.08□□□□□ -0.96
CCHCR1-211ENST00000467553 FOXI1Q12951 378 aa9.08□□□□□ -0.96
CCHCR1-211ENST00000467553 C9orf163Q8N9P6 203 aa9.08□□□□□ -0.96
CCHCR1-211ENST00000467553 CIRBP-AS1Q8TBR5 109 aa9.08□□□□□ -0.96
CCHCR1-211ENST00000467553 CSDC2Q9Y534 153 aaKnown RBP9.08□□□□□ -0.96
CCHCR1-211ENST00000467553 S100PP25815 95 aa9.07□□□□□ -0.96
CCHCR1-211ENST00000467553 HIGD2BQ4VC39 106 aa9.07□□□□□ -0.96
CCHCR1-211ENST00000467553 C15orf56Q8N910 161 aa9.07□□□□□ -0.96
CCHCR1-211ENST00000467553 MAP1LC3AQ9H492 121 aa9.07□□□□□ -0.96
CCHCR1-211ENST00000467553 TRAV13-1A0A0B4J241 112 aa9.06□□□□□ -0.96
CCHCR1-211ENST00000467553 SLPIP03973 132 aa9.06□□□□□ -0.96
CCHCR1-211ENST00000467553 C10orf91Q5T1B1 145 aa9.06□□□□□ -0.96
CCHCR1-211ENST00000467553 SERTAD4-AS1Q5TG53 156 aa9.06□□□□□ -0.96
CCHCR1-211ENST00000467553 Q6ZUT4 128 aa9.06□□□□□ -0.96
CCHCR1-211ENST00000467553 TIMM21Q9BVV7 248 aa9.06□□□□□ -0.96
CCHCR1-211ENST00000467553 RPS10P5Q9NQ39 176 aa9.06□□□□□ -0.96
CCHCR1-211ENST00000467553 LAMTOR2Q9Y2Q5 125 aa9.06□□□□□ -0.96
CCHCR1-211ENST00000467553 FAT3Q8TDW7 4589 aa9.06□□□□□ -0.96
CCHCR1-211ENST00000467553 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.05□□□□□ -0.96
CCHCR1-211ENST00000467553 PRSS47A8MTI9 375 aa9.05□□□□□ -0.96
CCHCR1-211ENST00000467553 C1orf196B1AJZ1 125 aa9.05□□□□□ -0.96
CCHCR1-211ENST00000467553 KIAA1644Q3SXP7 199 aa9.05□□□□□ -0.96
CCHCR1-211ENST00000467553 CD164L2Q6UWJ8 174 aa9.05□□□□□ -0.96
CCHCR1-211ENST00000467553 TRAV9-1A0A075B6T8 112 aa9.04□□□□□ -0.96
CCHCR1-211ENST00000467553 KRTAP10-4P60372 401 aaPredicted RBP9.04□□□□□ -0.96
CCHCR1-211ENST00000467553 CNBPP62633 177 aaKnown RBP9.04□□□□□ -0.96
CCHCR1-211ENST00000467553 Q8N8P6 123 aa9.04□□□□□ -0.96
CCHCR1-211ENST00000467553 OPRPNQ99935 248 aaPredicted RBP9.04□□□□□ -0.96
CCHCR1-211ENST00000467553 CARHSP1Q9Y2V2 147 aaKnown RBP9.04□□□□□ -0.96
CCHCR1-211ENST00000467553 LRP1Q07954 4544 aaKnown RBP9.04□□□□□ -0.96
CCHCR1-211ENST00000467553 SDIM1Q6ZPB5 146 aa9.03□□□□□ -0.96
CCHCR1-211ENST00000467553 DPH3Q96FX2 82 aa9.03□□□□□ -0.96
CCHCR1-211ENST00000467553 SPANXA1Q9NS26 97 aa9.03□□□□□ -0.96
CCHCR1-211ENST00000467553 IGHV3-64A0A075B6Q5 118 aa9.02□□□□□ -0.97
CCHCR1-211ENST00000467553 IGHV1-58A0A0C4DH39 117 aa9.02□□□□□ -0.97
CCHCR1-211ENST00000467553 MALP21145 153 aa9.02□□□□□ -0.97
CCHCR1-211ENST00000467553 RHEBQ15382 184 aa9.02□□□□□ -0.97
CCHCR1-211ENST00000467553 LINC00526Q96FQ7 95 aa9.02□□□□□ -0.97
CCHCR1-211ENST00000467553 GVQW2A0A096LPI5 108 aaPredicted RBP9.01□□□□□ -0.97
CCHCR1-211ENST00000467553 COX7A2LO14548 114 aa9.01□□□□□ -0.97
CCHCR1-211ENST00000467553 APOC3P02656 99 aa9.01□□□□□ -0.97
CCHCR1-211ENST00000467553 IFI27P40305 119 aaPredicted RBP9.01□□□□□ -0.97
CCHCR1-211ENST00000467553 C5orf38Q86SI9 138 aa9.01□□□□□ -0.97
CCHCR1-211ENST00000467553 FAM104AQ969W3 186 aa9.01□□□□□ -0.97
CCHCR1-211ENST00000467553 GNB1LQ9BYB4 327 aa9.01□□□□□ -0.97
CCHCR1-211ENST00000467553 ZNF561-AS1K7EIQ3 104 aa9□□□□□ -0.97
CCHCR1-211ENST00000467553 MRPS36P82909 103 aaKnown RBP9□□□□□ -0.97
CCHCR1-211ENST00000467553 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9□□□□□ -0.97
CCHCR1-211ENST00000467553 IFITM10A6NMD0 228 aa8.99□□□□□ -0.97
CCHCR1-211ENST00000467553 PANO1I0J062 215 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms