RNA–Protein interactions for RNA: ENST00000467323.1

MSH2-205, Transcript of mutS homolog 2, humanhuman

TSL 3

Gene MSH2, Length 313 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-205ENST00000467323 KIR3DP1A8MWS1 328 aa2.25□□□□□ -2.05
MSH2-205ENST00000467323 CD2P06729 351 aa2.25□□□□□ -2.05
MSH2-205ENST00000467323 PYYP10082 97 aa2.25□□□□□ -2.05
MSH2-205ENST00000467323 DCDP81605 110 aaKnown RBP2.25□□□□□ -2.05
MSH2-205ENST00000467323 MRPS10P82664 201 aaKnown RBP2.25□□□□□ -2.05
MSH2-205ENST00000467323 TFF3Q07654 80 aa2.25□□□□□ -2.05
MSH2-205ENST00000467323 CCSMST1Q4G0I0 132 aa2.25□□□□□ -2.05
MSH2-205ENST00000467323 FP248Q71RG6 208 aaPredicted RBP2.25□□□□□ -2.05
MSH2-205ENST00000467323 SDF2Q99470 211 aa2.25□□□□□ -2.05
MSH2-205ENST00000467323 LSM2Q9Y333 95 aaKnown RBP2.25□□□□□ -2.05
MSH2-205ENST00000467323 LOC107984156A0A0G2JMH3 177 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 M0R2P5 195 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 ZNF25P17030 456 aaPredicted RBP2.24□□□□□ -2.05
MSH2-205ENST00000467323 SPINT3P49223 89 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 KRTAP1-1Q07627 177 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 KRTAP13-3Q3SY46 172 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 ARL17AQ8IVW1 177 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 TCTEX1D1Q8N7M0 179 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 LCN9Q8WX39 176 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 TCEAL7Q9BRU2 100 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 SNRNP25Q9BV90 132 aaKnown RBP2.24□□□□□ -2.05
MSH2-205ENST00000467323 NINQ8N4C6 2090 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 DCHS2Q6V1P9 2916 aa2.24□□□□□ -2.05
MSH2-205ENST00000467323 MED12LQ86YW9 2145 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 CXorf51AA0A1B0GTR3 108 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 ZNF736B4DX44 427 aaPredicted RBP2.23□□□□□ -2.05
MSH2-205ENST00000467323 EDF1O60869 148 aaKnown RBP2.23□□□□□ -2.05
MSH2-205ENST00000467323 HYPMO75409 117 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 STATHP02808 62 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 FGF7P21781 194 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 CNBPP62633 177 aaKnown RBP2.23□□□□□ -2.05
MSH2-205ENST00000467323 LINC01545Q5VT33 79 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 BRD3OSQ6XYD6 125 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 FOXI2Q6ZQN5 318 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 FAM19A2Q8N3H0 131 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 KCNRGQ8N5I3 272 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 OR10AG1Q8NH19 301 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 ATP6V0E2Q8NHE4 81 aa2.23□□□□□ -2.05
MSH2-205ENST00000467323 NAA38Q9BRA0 125 aaKnown RBP2.23□□□□□ -2.05
MSH2-205ENST00000467323 JMJD1CQ15652 2540 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 EXPH5Q8NEV8 1989 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 F6UZH7 168 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 J3QRE1 110 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 CCL22O00626 93 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 MIR22HGQ0VDD5 57 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 OCIAD2Q56VL3 154 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 KRTAP26-1Q6PEX3 210 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 TEX261Q6UWH6 196 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 ATP11AUNQ6ZP68 121 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 COA5Q86WW8 74 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 Q8N2B8 174 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 ZNF436-AS1Q8NC38 126 aaPredicted RBP2.22□□□□□ -2.05
MSH2-205ENST00000467323 Q8TAT8 98 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 COPS9Q8WXC6 57 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 PSMG3Q9BT73 122 aaPredicted RBP2.22□□□□□ -2.05
MSH2-205ENST00000467323 PDCD10Q9BUL8 212 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 USF3Q68DE3 2245 aa2.22□□□□□ -2.05
MSH2-205ENST00000467323 NSD1Q96L73 2696 aaPredicted RBP2.22□□□□□ -2.05
MSH2-205ENST00000467323 FBN1P35555 2871 aaKnown RBP2.21□□□□□ -2.06
MSH2-205ENST00000467323 TRBV6-8A0A0A6YYG3 113 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 A0A1W2PRS3 328 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 A6NN06 94 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 ATP6V1G2-DDX39BF2Z307 99 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 M0R129 80 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 FAM74A1Q5RGS3 127 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 C10orf55Q5SWW7 151 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 DPH3Q96FX2 82 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 C12orf57Q99622 126 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 CCL19Q99731 98 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 RERGLQ9H628 205 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 ORMDL1Q9P0S3 153 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 HRNRQ86YZ3 2850 aaPredicted RBP2.21□□□□□ -2.06
MSH2-205ENST00000467323 HIVEP2P31629 2446 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 ANK3Q12955 4377 aaKnown RBP2.21□□□□□ -2.06
MSH2-205ENST00000467323 CUBNO60494 3623 aa2.21□□□□□ -2.06
MSH2-205ENST00000467323 PRRC2CQ9Y520 2896 aaKnown RBP2.2□□□□□ -2.06
MSH2-205ENST00000467323 ABCA1O95477 2261 aa2.2□□□□□ -2.06
MSH2-205ENST00000467323 NIPBLQ6KC79 2804 aaeCLIP2.2□□□□□ -2.06
MSH2-205ENST00000467323 F8W1H4 67 aa2.2□□□□□ -2.06
MSH2-205ENST00000467323 COX7CP15954 63 aa2.2□□□□□ -2.06
MSH2-205ENST00000467323 MEIG1Q5JSS6 88 aa2.2□□□□□ -2.06
MSH2-205ENST00000467323 Q6ZUT4 128 aa2.2□□□□□ -2.06
MSH2-205ENST00000467323 SNX29P2Q8IUI4 249 aa2.2□□□□□ -2.06
MSH2-205ENST00000467323 TSLPQ969D9 159 aa2.2□□□□□ -2.06
MSH2-205ENST00000467323 NOP16Q9Y3C1 178 aaKnown RBP2.2□□□□□ -2.06
MSH2-205ENST00000467323 MED12Q93074 2177 aa2.2□□□□□ -2.06
MSH2-205ENST00000467323 SONP18583 2426 aaKnown RBP2.2□□□□□ -2.06
MSH2-205ENST00000467323 COL6A5A8TX70 2615 aa2.2□□□□□ -2.06
MSH2-205ENST00000467323 TLN2Q9Y4G6 2542 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 TRAV12-2A0A075B6T6 113 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 H0YGG7 62 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 J3QLW9 94 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 CORTO00230 105 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 AKAIN1P0CW23 69 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 BTG2P78543 158 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 NCBP2-AS2Q69YL0 99 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 ZCCHC23Q6ZST2 131 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 PP6455Q8WZ26 134 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 LINC00052Q96N35 136 aa2.19□□□□□ -2.06
MSH2-205ENST00000467323 TMEM106BQ9NUM4 274 aa2.19□□□□□ -2.06
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms