RNA–Protein interactions for RNA: ENST00000466252.5

SNX21-208, Transcript of sorting nexin family member 21, humanhuman

TSL 3

Gene SNX21, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX21-208ENST00000466252 YPEL4Q96NS1 127 aa15.16■□□□□ 0.02
SNX21-208ENST00000466252 MAP1LC3AQ9H492 121 aa15.16■□□□□ 0.02
SNX21-208ENST00000466252 IGLV10-54A0A075B6I4 117 aa15.15■□□□□ 0.02
SNX21-208ENST00000466252 LECT2O14960 151 aa15.15■□□□□ 0.02
SNX21-208ENST00000466252 Q8N8P6 123 aa15.15■□□□□ 0.02
SNX21-208ENST00000466252 OR5A1Q8NGJ0 315 aa15.15■□□□□ 0.02
SNX21-208ENST00000466252 TMEM101Q96IK0 257 aa15.15■□□□□ 0.02
SNX21-208ENST00000466252 TIMM21Q9BVV7 248 aa15.15■□□□□ 0.02
SNX21-208ENST00000466252 CDPF1Q6NVV7 123 aa15.14■□□□□ 0.01
SNX21-208ENST00000466252 ZNF664Q8N3J9 261 aa15.14■□□□□ 0.01
SNX21-208ENST00000466252 FAM104AQ969W3 186 aa15.14■□□□□ 0.01
SNX21-208ENST00000466252 TMEM18Q96B42 140 aa15.13■□□□□ 0.01
SNX21-208ENST00000466252 MT-ND6P03923 174 aa15.12■□□□□ 0.01
SNX21-208ENST00000466252 RAB5AP20339 215 aa15.12■□□□□ 0.01
SNX21-208ENST00000466252 RPL39P62891 51 aaKnown RBP15.12■□□□□ 0.01
SNX21-208ENST00000466252 NTN5Q8WTR8 489 aaPredicted RBP15.12■□□□□ 0.01
SNX21-208ENST00000466252 ALKBH7Q9BT30 221 aaPredicted RBP15.12■□□□□ 0.01
SNX21-208ENST00000466252 MRPL18Q9H0U6 180 aaKnown RBP15.12■□□□□ 0.01
SNX21-208ENST00000466252 DNAH5Q8TE73 4624 aa15.12■□□□□ 0.01
SNX21-208ENST00000466252 DGAT2L7PQ6IED9 249 aa15.11■□□□□ 0.01
SNX21-208ENST00000466252 IGKV3OR2-268A0A0C4DH90 116 aa15.1■□□□□ 0.01
SNX21-208ENST00000466252 IFI27P40305 119 aaPredicted RBP15.1■□□□□ 0.01
SNX21-208ENST00000466252 SMAGPQ0VAQ4 97 aa15.1■□□□□ 0.01
SNX21-208ENST00000466252 LRP1BQ9NZR2 4599 aa15.09■□□□□ 0.01
SNX21-208ENST00000466252 LINC00959A0A1B0GUT2 108 aa15.09■□□□□ 0.01
SNX21-208ENST00000466252 FABP9Q0Z7S8 132 aa15.09■□□□□ 0.01
SNX21-208ENST00000466252 NXT2Q9NPJ8 142 aaKnown RBP15.09■□□□□ 0.01
SNX21-208ENST00000466252 K7EMI3 77 aa15.08■□□□□ 0
SNX21-208ENST00000466252 USP17L23D6RBM5 183 aa15.07■□□□□ 0
SNX21-208ENST00000466252 CHCHD10Q8WYQ3 142 aaPredicted RBP15.07■□□□□ 0
SNX21-208ENST00000466252 IGLV5-52A0A0A0MRZ9 124 aa15.06■□□□□ 0
SNX21-208ENST00000466252 GAGE12HA6NDE8 117 aa15.06■□□□□ 0
SNX21-208ENST00000466252 KRTAP10-1P60331 282 aa15.06■□□□□ 0
SNX21-208ENST00000466252 OPRPNQ99935 248 aaPredicted RBP15.06■□□□□ 0
SNX21-208ENST00000466252 SPANXA1Q9NS26 97 aa15.06■□□□□ 0
SNX21-208ENST00000466252 PYGO1Q9Y3Y4 419 aa15.06■□□□□ 0
SNX21-208ENST00000466252 TRAPPC1Q9Y5R8 145 aa15.06■□□□□ 0
SNX21-208ENST00000466252 GCSHP23434 173 aa15.05■□□□□ -0
SNX21-208ENST00000466252 MRPS36P82909 103 aaKnown RBP15.05■□□□□ -0
SNX21-208ENST00000466252 Q6ZUT4 128 aa15.05■□□□□ -0
SNX21-208ENST00000466252 SMCO4Q9NRQ5 59 aa15.05■□□□□ -0
SNX21-208ENST00000466252 IGLV2-33A0A075B6J2 118 aaPredicted RBP15.04■□□□□ -0
SNX21-208ENST00000466252 LINC01546A6NGU7 62 aa15.04■□□□□ -0
SNX21-208ENST00000466252 PRSS1P07477 247 aa15.04■□□□□ -0
SNX21-208ENST00000466252 C14orf177Q52M58 125 aa15.04■□□□□ -0
SNX21-208ENST00000466252 RNASE13Q5GAN3 156 aaKnown RBP15.04■□□□□ -0
SNX21-208ENST00000466252 FOXI1Q12951 378 aa15.03■□□□□ -0
SNX21-208ENST00000466252 SS18Q15532 418 aa15.03■□□□□ -0
SNX21-208ENST00000466252 ORMDL2Q53FV1 153 aa15.03■□□□□ -0
SNX21-208ENST00000466252 CBLN2Q8IUK8 224 aa15.03■□□□□ -0
SNX21-208ENST00000466252 CCL25O15444 150 aa15.02■□□□□ -0
SNX21-208ENST00000466252 PRSS3P2Q8NHM4 247 aa15.02■□□□□ -0
SNX21-208ENST00000466252 C2orf66Q6UXQ4 117 aa15.01□□□□□ -0.01
SNX21-208ENST00000466252 KIAA1109Q2LD37 5005 aa15.01□□□□□ -0.01
SNX21-208ENST00000466252 C1orf196B1AJZ1 125 aa15□□□□□ -0.01
SNX21-208ENST00000466252 CDK2AP2O75956 126 aa15□□□□□ -0.01
SNX21-208ENST00000466252 CYSLTR1Q9Y271 337 aa15□□□□□ -0.01
SNX21-208ENST00000466252 IGIPA6NJ69 53 aa14.99□□□□□ -0.01
SNX21-208ENST00000466252 XCL1P47992 114 aa14.99□□□□□ -0.01
SNX21-208ENST00000466252 CD164L2Q6UWJ8 174 aa14.99□□□□□ -0.01
SNX21-208ENST00000466252 IGLV4-3A0A075B6K6 122 aa14.98□□□□□ -0.01
SNX21-208ENST00000466252 C15orf56Q8N910 161 aa14.98□□□□□ -0.01
SNX21-208ENST00000466252 TRAV13-1A0A0B4J241 112 aa14.97□□□□□ -0.01
SNX21-208ENST00000466252 C18orf32Q8TCD1 76 aa14.97□□□□□ -0.01
SNX21-208ENST00000466252 SLPIP03973 132 aa14.96□□□□□ -0.01
SNX21-208ENST00000466252 G0S2P27469 103 aa14.96□□□□□ -0.01
SNX21-208ENST00000466252 TOMM6Q96B49 74 aa14.96□□□□□ -0.01
SNX21-208ENST00000466252 URB1-AS1Q96HZ7 61 aa14.96□□□□□ -0.01
SNX21-208ENST00000466252 NPSP0C0P6 89 aa14.95□□□□□ -0.02
SNX21-208ENST00000466252 XGP55808 180 aa14.95□□□□□ -0.02
SNX21-208ENST00000466252 CFAP161Q6P656 301 aa14.95□□□□□ -0.02
SNX21-208ENST00000466252 LINC01620Q4KN68 170 aa14.94□□□□□ -0.02
SNX21-208ENST00000466252 TMEM141Q96I45 108 aa14.94□□□□□ -0.02
SNX21-208ENST00000466252 AMELXQ99217 191 aa14.93□□□□□ -0.02
SNX21-208ENST00000466252 KRTAP17-1Q9BYP8 105 aa14.93□□□□□ -0.02
SNX21-208ENST00000466252 FAM30AQ9NZY2 134 aa14.93□□□□□ -0.02
SNX21-208ENST00000466252 APOBP04114 4563 aaKnown RBP14.92□□□□□ -0.02
SNX21-208ENST00000466252 hDV102S1A0JD36 115 aa14.92□□□□□ -0.02
SNX21-208ENST00000466252 COLCA2A8K830 154 aa14.92□□□□□ -0.02
SNX21-208ENST00000466252 LINC00173Q6ZV60 143 aa14.92□□□□□ -0.02
SNX21-208ENST00000466252 C9orf163Q8N9P6 203 aa14.92□□□□□ -0.02
SNX21-208ENST00000466252 LINC00614P0C842 121 aa14.91□□□□□ -0.02
SNX21-208ENST00000466252 CNBPP62633 177 aaKnown RBP14.91□□□□□ -0.02
SNX21-208ENST00000466252 ZC2HC1BQ5TFG8 222 aa14.91□□□□□ -0.02
SNX21-208ENST00000466252 FA2HQ7L5A8 372 aa14.91□□□□□ -0.02
SNX21-208ENST00000466252 GVQW2A0A096LPI5 108 aaPredicted RBP14.9□□□□□ -0.02
SNX21-208ENST00000466252 IGHV3OR16-9A0A0B4J2B5 98 aa14.9□□□□□ -0.02
SNX21-208ENST00000466252 ERASQ7Z444 233 aa14.9□□□□□ -0.02
SNX21-208ENST00000466252 TIMM17AQ99595 171 aa14.9□□□□□ -0.02
SNX21-208ENST00000466252 HSPG2P98160 4391 aa14.9□□□□□ -0.02
SNX21-208ENST00000466252 IGHV1-58A0A0C4DH39 117 aa14.89□□□□□ -0.03
SNX21-208ENST00000466252 IFITM10A6NMD0 228 aa14.89□□□□□ -0.03
SNX21-208ENST00000466252 Q6ZSA8 131 aa14.89□□□□□ -0.03
SNX21-208ENST00000466252 VCX2Q9H322 139 aa14.89□□□□□ -0.03
SNX21-208ENST00000466252 DNAH8Q96JB1 4490 aa14.89□□□□□ -0.03
SNX21-208ENST00000466252 LINC01549A6NIU2 74 aa14.88□□□□□ -0.03
SNX21-208ENST00000466252 HIGD2BQ4VC39 106 aa14.88□□□□□ -0.03
SNX21-208ENST00000466252 LINC00242Q5T6M2 205 aa14.88□□□□□ -0.03
SNX21-208ENST00000466252 TEX43Q6ZNM6 134 aa14.88□□□□□ -0.03
SNX21-208ENST00000466252 C5orf38Q86SI9 138 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms