RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 DCDP81605 110 aaKnown RBP-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 COMMD6Q7Z4G1 85 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 MYOZ3Q8TDC0 251 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 TP53AIP1Q9HCN2 124 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 COL7A1Q02388 2944 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 IGSF10Q6WRI0 2623 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 UNC79Q9P2D8 2635 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 HIVEP3Q5T1R4 2406 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 PPRC1Q5VV67 1664 aaKnown RBP-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 RIMS1Q86UR5 1692 aaKnown RBP-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 LAMC1P11047 1609 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 A0A1B0GV90 55 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 CHKB-CPT1BH3BT56 60 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 SSSCA1O60232 199 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 Q5VSD8 79 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 PP6455Q8WZ26 134 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 LINC00472Q9H8W2 130 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 LINC00474Q9P2X8 69 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 PLXNB2O15031 1838 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 CELSR1Q9NYQ6 3014 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 CHD9Q3L8U1 2897 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 C10orf71Q711Q0 1435 aa-0.04□□□□□ -2.42
CCDC93-205ENST00000466171 CUL7Q14999 1698 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 QRICH2Q9H0J4 1663 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 ROBO1Q9Y6N7 1651 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 KMT2AQ03164 3969 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 TRBV6-1A0A0K0K1D8 114 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 SFT2D2O95562 160 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 TNFP01375 233 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 SPRR1AP35321 89 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 UQCR10Q9UDW1 63 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 LINC01558Q9Y6Z2 57 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 A2ML1A8K2U0 1454 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 HMCN2Q8NDA2 5059 aa-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 KDM5AP29375 1690 aaKnown RBP-0.05□□□□□ -2.42
CCDC93-205ENST00000466171 SBF2Q86WG5 1849 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 WNK2Q9Y3S1 2297 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 FAM208BQ5VWN6 2430 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 UBR5O95071 2799 aaPredicted RBP-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 UBE2L5PA0A1B0GUS4 154 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 LOC285095A0A1B0GVY8 99 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 I3L2K1 104 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 PI4KAP42356 2102 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 GNG11P61952 73 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 UBE2L3P68036 154 aaKnown RBP-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 PIGYQ3MUY2 71 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 FAIMQ9NVQ4 179 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 BCL9LQ86UU0 1499 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 HUWE1Q7Z6Z7 4374 aaKnown RBP-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 SHROOM2Q13796 1616 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 PSME4Q14997 1843 aa-0.06□□□□□ -2.42
CCDC93-205ENST00000466171 NALCNQ8IZF0 1738 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 CSMD3Q7Z407 3707 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 MYOM2P54296 1465 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 FAM24AA6NFZ4 105 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 DLEU1O43261 78 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 MGPP08493 103 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 S100A1P23297 94 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 SARNPP82979 210 aaKnown RBP-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 SFTA2Q6UW10 78 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 SVBPQ8N300 66 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 NXT2Q9NPJ8 142 aaKnown RBP-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 MANBALQ9NQG1 85 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 PAPPAQ13219 1627 aa-0.07□□□□□ -2.42
CCDC93-205ENST00000466171 SPTBN2O15020 2390 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 ARHGEF12Q9NZN5 1544 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 LPAP08519 4548 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 EFCAB10A6NFE3 127 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 IGLC1P0CG04 106 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 GNG4P50150 75 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 ATP5EP56381 51 aaPredicted RBP-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 UBA52P62987 128 aaKnown RBP-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 FAM223AQ8IWN6 122 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 FDCSPQ8NFU4 85 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 ARL2-SNX15V9GYD0 113 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 MYOM1P52179 1685 aa-0.08□□□□□ -2.42
CCDC93-205ENST00000466171 MYCBP2O75592 4640 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 POLA1P09884 1462 aaPredicted RBP-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 SHANK2Q9UPX8 1470 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 ZNF292O60281 2723 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 ARHGEF5Q12774 1597 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 SCAPERQ9BY12 1400 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 NSD3Q9BZ95 1437 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 F6UZH7 168 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 PPP3R1P63098 170 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 Q0VG73 95 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 FXYD6Q9H0Q3 95 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 DPH3P1Q9H4G8 78 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 GNG8Q9UK08 70 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 BTAF1O14981 1849 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 RAPGEF6Q8TEU7 1601 aa-0.09□□□□□ -2.42
CCDC93-205ENST00000466171 WDR7Q9Y4E6 1490 aa-0.1□□□□□ -2.42
CCDC93-205ENST00000466171 EIF4G3O43432 1585 aaKnown RBP-0.1□□□□□ -2.42
CCDC93-205ENST00000466171 SMG6Q86US8 1419 aaKnown RBP-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 PTPRQQ9UMZ3 2332 aa-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 ABCA2Q9BZC7 2435 aa-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 K7EQZ3 153 aa-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 TRAPPC2P0DI81 140 aa-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 TRAPPC2BP0DI82 140 aa-0.1□□□□□ -2.43
CCDC93-205ENST00000466171 COX6B1P14854 86 aa-0.1□□□□□ -2.43
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms