RNA–Protein interactions for RNA: ENST00000466054.1

LRCH3-211, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 2

Gene LRCH3, Length 683 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-211ENST00000466054 SPRR2BP35325 72 aa-0.6□□□□□ -2.51
LRCH3-211ENST00000466054 AQP10Q96PS8 301 aa-0.6□□□□□ -2.51
LRCH3-211ENST00000466054 PAIP2BQ9ULR5 123 aaKnown RBP-0.6□□□□□ -2.51
LRCH3-211ENST00000466054 APC2O95996 2303 aa-0.6□□□□□ -2.51
LRCH3-211ENST00000466054 LRP6O75581 1613 aa-0.6□□□□□ -2.51
LRCH3-211ENST00000466054 MRC1P22897 1456 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 PKHD1L1Q86WI1 4243 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 SVEP1Q4LDE5 3571 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 M0R135 149 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 SPRR1AP35321 89 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 COPS9Q8WXC6 57 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 LENEPQ9Y5L5 61 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 LAMC1P11047 1609 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 DNAH3Q8TD57 4116 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 MUC17Q685J3 4493 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 PATJQ8NI35 1801 aa-0.61□□□□□ -2.51
LRCH3-211ENST00000466054 ITPR3Q14573 2671 aa-0.62□□□□□ -2.51
LRCH3-211ENST00000466054 BCE1O60756 84 aa-0.62□□□□□ -2.51
LRCH3-211ENST00000466054 C12orf73Q69YU5 71 aa-0.62□□□□□ -2.51
LRCH3-211ENST00000466054 CTXND1A0A1B0GTU2 59 aa-0.63□□□□□ -2.51
LRCH3-211ENST00000466054 HAMPP81172 84 aa-0.63□□□□□ -2.51
LRCH3-211ENST00000466054 RBM3P98179 157 aaKnown RBP-0.63□□□□□ -2.51
LRCH3-211ENST00000466054 C10orf128Q5T292 105 aa-0.63□□□□□ -2.51
LRCH3-211ENST00000466054 VWFP04275 2813 aa-0.63□□□□□ -2.51
LRCH3-211ENST00000466054 CHD6Q8TD26 2715 aa-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 PRKDCP78527 4128 aaKnown RBP-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 DOCK1Q14185 1865 aa-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 ERCC6L2Q5T890 1561 aa-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 AGPAT4-IT1Q9H0P7 198 aa-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 TP53AIP1Q9HCN2 124 aa-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 DNHD1Q96M86 4753 aa-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 TEP1Q99973 2627 aaKnown RBP-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 SONP18583 2426 aaKnown RBP-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 DOCK2Q92608 1830 aa-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 PIEZO2Q9H5I5 2752 aa-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 FAT3Q8TDW7 4589 aa-0.64□□□□□ -2.51
LRCH3-211ENST00000466054 DNAH2Q9P225 4427 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 PI4KAP42356 2102 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 CFTRP13569 1480 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 EPG5Q9HCE0 2579 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 PRM1P04553 51 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 HIST1H1DP16402 221 aaKnown RBP-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 ARPC4P59998 168 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 SPAG11BQ08648 103 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 SPAG11AQ6PDA7 123 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 PDCD10Q9BUL8 212 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 PPIP5K1Q6PFW1 1433 aa-0.65□□□□□ -2.51
LRCH3-211ENST00000466054 FASNP49327 2511 aaKnown RBP-0.66□□□□□ -2.51
LRCH3-211ENST00000466054 BCL9LQ86UU0 1499 aa-0.66□□□□□ -2.51
LRCH3-211ENST00000466054 PLECQ15149 4684 aaKnown RBP-0.66□□□□□ -2.51
LRCH3-211ENST00000466054 ARAP2Q8WZ64 1704 aa-0.66□□□□□ -2.51
LRCH3-211ENST00000466054 MAP1BP46821 2468 aaKnown RBP-0.66□□□□□ -2.51
LRCH3-211ENST00000466054 DCDP81605 110 aaKnown RBP-0.66□□□□□ -2.52
LRCH3-211ENST00000466054 COX17Q14061 63 aa-0.66□□□□□ -2.52
LRCH3-211ENST00000466054 Q8N8P6 123 aa-0.66□□□□□ -2.52
LRCH3-211ENST00000466054 V9GYH0 126 aa-0.66□□□□□ -2.52
LRCH3-211ENST00000466054 C10orf71Q711Q0 1435 aa-0.66□□□□□ -2.52
LRCH3-211ENST00000466054 TNRC18O15417 2968 aaPredicted RBP-0.67□□□□□ -2.52
LRCH3-211ENST00000466054 TTC9CQ8N5M4 171 aa-0.67□□□□□ -2.52
LRCH3-211ENST00000466054 RERGLQ9H628 205 aa-0.67□□□□□ -2.52
LRCH3-211ENST00000466054 ZNF236Q9UL36 1845 aa-0.67□□□□□ -2.52
LRCH3-211ENST00000466054 NIPBLQ6KC79 2804 aaeCLIP-0.67□□□□□ -2.52
LRCH3-211ENST00000466054 AKAP9Q99996 3911 aa-0.68□□□□□ -2.52
LRCH3-211ENST00000466054 USF3Q68DE3 2245 aa-0.68□□□□□ -2.52
LRCH3-211ENST00000466054 I3L2K1 104 aa-0.68□□□□□ -2.52
LRCH3-211ENST00000466054 SPRR2AP35326 72 aa-0.68□□□□□ -2.52
LRCH3-211ENST00000466054 AMELXQ99217 191 aa-0.68□□□□□ -2.52
LRCH3-211ENST00000466054 SERP1Q9Y6X1 66 aa-0.68□□□□□ -2.52
LRCH3-211ENST00000466054 USP9XQ93008 2570 aaPredicted RBP-0.68□□□□□ -2.52
LRCH3-211ENST00000466054 SBF2Q86WG5 1849 aa-0.68□□□□□ -2.52
LRCH3-211ENST00000466054 VPS13DQ5THJ4 4388 aa-0.68□□□□□ -2.52
LRCH3-211ENST00000466054 HTTP42858 3142 aa-0.69□□□□□ -2.52
LRCH3-211ENST00000466054 SPRR2EP22531 72 aa-0.69□□□□□ -2.52
LRCH3-211ENST00000466054 KLK9Q2XQG4 91 aa-0.69□□□□□ -2.52
LRCH3-211ENST00000466054 TMEM170BQ5T4T1 132 aa-0.69□□□□□ -2.52
LRCH3-211ENST00000466054 Q6AWC8 147 aa-0.69□□□□□ -2.52
LRCH3-211ENST00000466054 SNRNP25Q9BV90 132 aaKnown RBP-0.69□□□□□ -2.52
LRCH3-211ENST00000466054 VPS13BQ7Z7G8 4022 aa-0.69□□□□□ -2.52
LRCH3-211ENST00000466054 DNAH7Q8WXX0 4024 aa-0.69□□□□□ -2.52
LRCH3-211ENST00000466054 MYO18BQ8IUG5 2567 aa-0.69□□□□□ -2.52
LRCH3-211ENST00000466054 SPTBN1Q01082 2364 aaKnown RBP-0.7□□□□□ -2.52
LRCH3-211ENST00000466054 LSM10Q969L4 123 aaKnown RBP-0.7□□□□□ -2.52
LRCH3-211ENST00000466054 WNK1Q9H4A3 2382 aa-0.7□□□□□ -2.52
LRCH3-211ENST00000466054 ANKHD1Q8IWZ3 2542 aaKnown RBP-0.71□□□□□ -2.52
LRCH3-211ENST00000466054 KIF21AQ7Z4S6 1674 aa-0.71□□□□□ -2.52
LRCH3-211ENST00000466054 MYO7BQ6PIF6 2116 aa-0.71□□□□□ -2.52
LRCH3-211ENST00000466054 ANK3Q12955 4377 aaKnown RBP-0.71□□□□□ -2.52
LRCH3-211ENST00000466054 DSPP15924 2871 aaKnown RBP-0.71□□□□□ -2.52
LRCH3-211ENST00000466054 SELENOWP63302 87 aa-0.71□□□□□ -2.52
LRCH3-211ENST00000466054 TACC2O95359 2948 aa-0.71□□□□□ -2.52
LRCH3-211ENST00000466054 WDR87Q6ZQQ6 2873 aa-0.72□□□□□ -2.52
LRCH3-211ENST00000466054 TRBV6-1A0A0K0K1D8 114 aa-0.72□□□□□ -2.52
LRCH3-211ENST00000466054 UQCR11O14957 56 aa-0.72□□□□□ -2.52
LRCH3-211ENST00000466054 KRTAP6-2Q3LI66 62 aa-0.72□□□□□ -2.52
LRCH3-211ENST00000466054 PIGYQ3MUY2 71 aa-0.72□□□□□ -2.52
LRCH3-211ENST00000466054 BAGE2Q86Y30 109 aa-0.72□□□□□ -2.52
LRCH3-211ENST00000466054 LINC00472Q9H8W2 130 aa-0.72□□□□□ -2.52
LRCH3-211ENST00000466054 BICRAQ9NZM4 1560 aa-0.72□□□□□ -2.52
LRCH3-211ENST00000466054 ABCA13Q86UQ4 5058 aa-0.72□□□□□ -2.52
LRCH3-211ENST00000466054 ATRQ13535 2644 aa-0.72□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms