RNA–Protein interactions for RNA: ENST00000465860.5

EXOSC3-204, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-204ENST00000465860 A0A087WWC5 75 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 TMEM218A2RU14 115 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 A8MWL6 223 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 F2Z2F3 143 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 F8W036 122 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 K7EP13 123 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 MT-ND4LP03901 98 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 XGP55808 180 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 SEC61BP60468 96 aaKnown RBP3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 CACNG7P62955 275 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 GAGE6Q13070 117 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 LAGE3Q14657 143 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 LINC01620Q4KN68 170 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 KRTAP26-1Q6PEX3 210 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 ATRAIDQ6UW56 229 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 SMIM15Q7Z3B0 74 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 C10orf126Q8N4M7 172 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 ISOC2Q96AB3 205 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 RNF185Q96GF1 192 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 SEC11CQ9BY50 192 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 DPH3P1Q9H4G8 78 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 OSTCQ9NRP0 149 aa3.14□□□□□ -1.91
EXOSC3-204ENST00000465860 MYCBP2O75592 4640 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 IGLV4-60A0A075B6I1 120 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 FAM231BA6NCW3 169 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 HIGD1CA8MV81 97 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 SMKR1H3BMG3 65 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 CDK2AP2O75956 126 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 S100A8P05109 93 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 TRGC1P0CF51 173 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 SMIM17P0DL12 118 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 RPS10P46783 165 aaKnown RBP3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 RBX1P62877 108 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 GAGE2BQ13066 116 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 RHEBQ15382 184 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 GAGE2EQ4V326 116 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 GAGE2AQ6NT46 116 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 RASL11AQ6T310 242 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 CLPSL2Q6UWE3 100 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 SVBPQ8N300 66 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 Q8N814 137 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 C20orf203Q8NBC4 194 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 NUP35Q8NFH5 326 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 TSKUQ8WUA8 353 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 BAALCQ8WXS3 180 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 UBE2WQ96B02 151 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 BTF3L4Q96K17 158 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 CHCHD5Q9BSY4 110 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 NIT2Q9NQR4 276 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 GAGE2DQ9UEU5 116 aa3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 CARHSP1Q9Y2V2 147 aaKnown RBP3.13□□□□□ -1.91
EXOSC3-204ENST00000465860 IGLV2-33A0A075B6J2 118 aaPredicted RBP3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 IGKV2D-24A0A075B6R9 120 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 A0A087WX48 190 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 A0A1B0GW15 77 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 TMEM262E9PQX1 116 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 PSCAO43653 123 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 SNAPINO95295 136 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 NCR2O95944 276 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 ANGP03950 147 aaKnown RBP3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 PRSS1P07477 247 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 RAB4AP20338 218 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 S100PP25815 95 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 IQCJQ1A5X6 159 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 KCNIP4Q6PIL6 250 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 PET117Q6UWS5 81 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 AMN1Q8IY45 258 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 LINC00269Q8N2A0 174 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 LITAFQ99732 161 aa3.12□□□□□ -1.91
EXOSC3-204ENST00000465860 IGLV10-54A0A075B6I4 117 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 TRBV25-1A0A075B6N4 114 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 TRAV9-1A0A075B6T8 112 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 TRAV8-3A0A0A6YYJ7 113 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 IGHV1-24A0A0C4DH33 117 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 A0A1B0GUT8 65 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 SMIM27A0A1W2PRY6 76 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 IGKV2-29A2NJV5 120 aaPredicted RBP3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 SDHAF1A6NFY7 115 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 H7C1H1 209 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 TSHBP01222 138 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 SMR3BP02814 79 aaPredicted RBP3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 SNRPEP62304 92 aaKnown RBP3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 RIGQ13278 110 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 ATP5L2Q7Z4Y8 100 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 SREK1IP1Q8N9Q2 155 aaPredicted RBP3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 CHCHD7Q9BUK0 85 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 TMEM191AQ9H0A3 160 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 PRR34Q9NV39 138 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 NAT8BQ9UHF3 227 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 URGCP-MRPS24S4R325 110 aa3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 LRP1Q07954 4544 aaKnown RBP3.11□□□□□ -1.91
EXOSC3-204ENST00000465860 A0A1B0GXF2 115 aa3.1□□□□□ -1.91
EXOSC3-204ENST00000465860 APOC3P02656 99 aa3.1□□□□□ -1.91
EXOSC3-204ENST00000465860 ADCYAP1P18509 176 aa3.1□□□□□ -1.91
EXOSC3-204ENST00000465860 POLR2KP53803 58 aaKnown RBP3.1□□□□□ -1.91
EXOSC3-204ENST00000465860 HBBP68871 147 aa3.1□□□□□ -1.91
EXOSC3-204ENST00000465860 REG3AQ06141 175 aa3.1□□□□□ -1.91
EXOSC3-204ENST00000465860 MRPL51Q4U2R6 128 aaKnown RBP3.1□□□□□ -1.91
EXOSC3-204ENST00000465860 C10orf91Q5T1B1 145 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms