RNA–Protein interactions for RNA: ENST00000465627.5

UBA3-208, Transcript of ubiquitin like modifier activating enzyme 3, human

TSL 2

Gene UBA3, Length 1,388 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA3-208	ENST00000465627	ZMAT4	Q9H898	229 aa		6.11	□□□□□ -1.43
UBA3-208	ENST00000465627	VPS13D	Q5THJ4	4388 aa		6.1	□□□□□ -1.43
UBA3-208	ENST00000465627	IGHV3-38	A0A0C4DH36	116 aa		6.1	□□□□□ -1.43
UBA3-208	ENST00000465627	NUDT3	O95989	172 aa		6.1	□□□□□ -1.43
UBA3-208	ENST00000465627	GYPE	P15421	78 aa		6.1	□□□□□ -1.43
UBA3-208	ENST00000465627	NANOS2	P60321	138 aa	Known RBP	6.1	□□□□□ -1.43
UBA3-208	ENST00000465627	RPL39	P62891	51 aa	Known RBP	6.1	□□□□□ -1.43
UBA3-208	ENST00000465627	C11orf45	Q8TAV5	145 aa		6.1	□□□□□ -1.43
UBA3-208	ENST00000465627	HSPB8	Q9UJY1	196 aa		6.1	□□□□□ -1.43
UBA3-208	ENST00000465627	KMT2A	Q03164	3969 aa		6.1	□□□□□ -1.43
UBA3-208	ENST00000465627	TRAV26-1	A0A087WT03	109 aa		6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	LINC01549	A6NIU2	74 aa		6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	SYS1-DBNDD2	H3BUS1	97 aa		6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	NHLRC4	P0CG21	123 aa	Predicted RBP	6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	SMIM6	P0DI80	62 aa		6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	BTF3	P20290	206 aa	Known RBP	6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	AKR1D1	P51857	326 aa		6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	ERAS	Q7Z444	233 aa		6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	IFI27L1	Q96BM0	104 aa		6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	CYSLTR1	Q9Y271	337 aa		6.09	□□□□□ -1.43
UBA3-208	ENST00000465627	PYGO1	Q9Y3Y4	419 aa		6.09	□□□□□ -1.43
UBA3-208	ENST00000465627		A0A096LPF7	62 aa		6.08	□□□□□ -1.44
UBA3-208	ENST00000465627		F5H768	121 aa		6.08	□□□□□ -1.44
UBA3-208	ENST00000465627	G0S2	P27469	103 aa		6.08	□□□□□ -1.44
UBA3-208	ENST00000465627	COTL1	Q14019	142 aa		6.08	□□□□□ -1.44
UBA3-208	ENST00000465627	LINC01545	Q5VT33	79 aa		6.08	□□□□□ -1.44
UBA3-208	ENST00000465627	PET117	Q6UWS5	81 aa		6.08	□□□□□ -1.44
UBA3-208	ENST00000465627	LINC00518	Q8N0U6	118 aa		6.08	□□□□□ -1.44
UBA3-208	ENST00000465627	TIMM17A	Q99595	171 aa		6.08	□□□□□ -1.44
UBA3-208	ENST00000465627	TIMM21	Q9BVV7	248 aa		6.08	□□□□□ -1.44
UBA3-208	ENST00000465627	TRBV6-8	A0A0A6YYG3	113 aa		6.07	□□□□□ -1.44
UBA3-208	ENST00000465627		A0A0J9YY99	117 aa		6.07	□□□□□ -1.44
UBA3-208	ENST00000465627	ATP5L	O75964	103 aa		6.07	□□□□□ -1.44
UBA3-208	ENST00000465627	NPS	P0C0P6	89 aa		6.07	□□□□□ -1.44
UBA3-208	ENST00000465627	TIRAP	P58753	221 aa		6.07	□□□□□ -1.44
UBA3-208	ENST00000465627	KRTDAP	P60985	99 aa		6.07	□□□□□ -1.44
UBA3-208	ENST00000465627	MRPL52	Q86TS9	123 aa	Known RBP	6.07	□□□□□ -1.44
UBA3-208	ENST00000465627	ATP6V0E2	Q8NHE4	81 aa		6.07	□□□□□ -1.44
UBA3-208	ENST00000465627	UBE2D4	Q9Y2X8	147 aa		6.07	□□□□□ -1.44
UBA3-208	ENST00000465627	IGLV4-3	A0A075B6K6	122 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627		H3BS24	57 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	HTN3	P15516	51 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	ODF1	Q14990	250 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	LGALS9C	Q6DKI2	356 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	BAALC	Q8WXS3	180 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	TMEM141	Q96I45	108 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	SCGB3A1	Q96QR1	104 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	AMELX	Q99217	191 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	MAP1LC3C	Q9BXW4	147 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	CSDC2	Q9Y534	153 aa	Known RBP	6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	HSPG2	P98160	4391 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	DEFB131B	A0A096LNP1	70 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	TRAV10	A0A0B4J240	114 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	TRAV12-1	A0A0B4J245	112 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	IGKV2-29	A2NJV5	120 aa	Predicted RBP	6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	BORCS8-MEF2B	H3BNR1	382 aa	Predicted RBP	6.06	□□□□□ -1.44
UBA3-208	ENST00000465627		H7C423	109 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	MRPS36	P82909	103 aa	Known RBP	6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	MRPL23	Q16540	153 aa	Known RBP	6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	TMEM97	Q5BJF2	176 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	TEX43	Q6ZNM6	134 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	OPRPN	Q99935	248 aa	Predicted RBP	6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	SPANXA1	Q9NS26	97 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627	ICOS	Q9Y6W8	199 aa		6.06	□□□□□ -1.44
UBA3-208	ENST00000465627		A0A087WX48	190 aa		6.05	□□□□□ -1.44
UBA3-208	ENST00000465627	ZC2HC1B	Q5TFG8	222 aa		6.05	□□□□□ -1.44
UBA3-208	ENST00000465627	CEMP1	Q6PRD7	247 aa	Predicted RBP	6.05	□□□□□ -1.44
UBA3-208	ENST00000465627	SH2D6	Q7Z4S9	175 aa		6.05	□□□□□ -1.44
UBA3-208	ENST00000465627	TMEM243	Q9BU79	118 aa		6.05	□□□□□ -1.44
UBA3-208	ENST00000465627	DYNC1H1	Q14204	4646 aa	Known RBP	6.04	□□□□□ -1.44
UBA3-208	ENST00000465627	SRRM2	Q9UQ35	2752 aa	Known RBP	6.04	□□□□□ -1.44
UBA3-208	ENST00000465627	TRBV25-1	A0A075B6N4	114 aa		6.04	□□□□□ -1.44
UBA3-208	ENST00000465627	PRSS29P	A6NIE9	313 aa		6.04	□□□□□ -1.44
UBA3-208	ENST00000465627	FGF6	P10767	208 aa		6.04	□□□□□ -1.44
UBA3-208	ENST00000465627	LYPD5	Q6UWN5	251 aa		6.04	□□□□□ -1.44
UBA3-208	ENST00000465627	C12orf57	Q99622	126 aa		6.04	□□□□□ -1.44
UBA3-208	ENST00000465627	CST9L	Q9H4G1	147 aa		6.04	□□□□□ -1.44
UBA3-208	ENST00000465627	IGLV4-69	A0A075B6H9	119 aa		6.03	□□□□□ -1.44
UBA3-208	ENST00000465627	SCGB1D1	O95968	90 aa		6.03	□□□□□ -1.44
UBA3-208	ENST00000465627	PMVK	Q15126	192 aa		6.03	□□□□□ -1.44
UBA3-208	ENST00000465627	LELP1	Q5T871	98 aa		6.03	□□□□□ -1.44
UBA3-208	ENST00000465627		Q6ZUT4	128 aa		6.03	□□□□□ -1.44
UBA3-208	ENST00000465627	KRTAP9-3	Q9BYQ3	159 aa		6.03	□□□□□ -1.44
UBA3-208	ENST00000465627	CDC42SE2	Q9NRR3	84 aa		6.03	□□□□□ -1.44
UBA3-208	ENST00000465627	MRPL35	Q9NZE8	188 aa	Known RBP	6.03	□□□□□ -1.44
UBA3-208	ENST00000465627	IGLV4-60	A0A075B6I1	120 aa		6.02	□□□□□ -1.45
UBA3-208	ENST00000465627		A0A1B0GUV1	79 aa		6.02	□□□□□ -1.45
UBA3-208	ENST00000465627		F8VRH5	84 aa		6.02	□□□□□ -1.45
UBA3-208	ENST00000465627	PRSS1	P07477	247 aa		6.02	□□□□□ -1.45
UBA3-208	ENST00000465627	ZNF25	P17030	456 aa	Predicted RBP	6.02	□□□□□ -1.45
UBA3-208	ENST00000465627		Q6ZN92	141 aa		6.02	□□□□□ -1.45
UBA3-208	ENST00000465627	FAM19A3	Q7Z5A8	133 aa		6.02	□□□□□ -1.45
UBA3-208	ENST00000465627	PMCHL2	Q9BQD1	86 aa		6.02	□□□□□ -1.45
UBA3-208	ENST00000465627	GAGE6	Q13070	117 aa		6.01	□□□□□ -1.45
UBA3-208	ENST00000465627	ESRG	Q1W209	222 aa		6.01	□□□□□ -1.45
UBA3-208	ENST00000465627	MAJIN	Q3KP22	176 aa		6.01	□□□□□ -1.45
UBA3-208	ENST00000465627	NFE4	Q86UQ8	179 aa		6.01	□□□□□ -1.45
UBA3-208	ENST00000465627	C15orf53	Q8NAA6	179 aa		6.01	□□□□□ -1.45
UBA3-208	ENST00000465627	DNAH6	Q9C0G6	4158 aa		6	□□□□□ -1.45

Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms