RNA–Protein interactions for RNA: ENST00000465187.1

EDEM1-205, Transcript of ER degradation enhancing alpha-mannosidase like protein 1, humanhuman

TSL 4

Gene EDEM1, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDEM1-205ENST00000465187 TSHBP01222 138 aa13.94□□□□□ -0.18
EDEM1-205ENST00000465187 SUMO2P61956 95 aaKnown RBP13.94□□□□□ -0.18
EDEM1-205ENST00000465187 TRBV24-1A0A075B6N3 115 aa13.93□□□□□ -0.18
EDEM1-205ENST00000465187 HNRNPA3P51991 378 aaKnown RBP13.93□□□□□ -0.18
EDEM1-205ENST00000465187 MIAQ16674 131 aa13.93□□□□□ -0.18
EDEM1-205ENST00000465187 C14orf177Q52M58 125 aa13.93□□□□□ -0.18
EDEM1-205ENST00000465187 C20orf78Q9BR46 151 aa13.93□□□□□ -0.18
EDEM1-205ENST00000465187 TMEM242Q9NWH2 141 aa13.93□□□□□ -0.18
EDEM1-205ENST00000465187 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.93□□□□□ -0.18
EDEM1-205ENST00000465187 IGLV4-60A0A075B6I1 120 aa13.92□□□□□ -0.18
EDEM1-205ENST00000465187 C7orf77A4D0Y5 90 aa13.92□□□□□ -0.18
EDEM1-205ENST00000465187 D6R8Y8 96 aa13.92□□□□□ -0.18
EDEM1-205ENST00000465187 H7C423 109 aa13.92□□□□□ -0.18
EDEM1-205ENST00000465187 PPBPP02775 128 aa13.92□□□□□ -0.18
EDEM1-205ENST00000465187 C20orf203Q8NBC4 194 aa13.92□□□□□ -0.18
EDEM1-205ENST00000465187 TNFRSF6BO95407 300 aa13.91□□□□□ -0.18
EDEM1-205ENST00000465187 ESDP10768 282 aa13.91□□□□□ -0.18
EDEM1-205ENST00000465187 CLRN3Q8NCR9 226 aa13.91□□□□□ -0.18
EDEM1-205ENST00000465187 HMCN2Q8NDA2 5059 aa13.91□□□□□ -0.18
EDEM1-205ENST00000465187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.9□□□□□ -0.18
EDEM1-205ENST00000465187 TRAV9-1A0A075B6T8 112 aa13.9□□□□□ -0.18
EDEM1-205ENST00000465187 IGKV2-29A2NJV5 120 aaPredicted RBP13.9□□□□□ -0.18
EDEM1-205ENST00000465187 PHOX2AO14813 284 aa13.89□□□□□ -0.19
EDEM1-205ENST00000465187 RPL32P62910 135 aaKnown RBP13.89□□□□□ -0.19
EDEM1-205ENST00000465187 RHEBQ15382 184 aa13.89□□□□□ -0.19
EDEM1-205ENST00000465187 TMEM136Q6ZRR5 245 aa13.89□□□□□ -0.19
EDEM1-205ENST00000465187 ORMDL3Q8N138 153 aa13.89□□□□□ -0.19
EDEM1-205ENST00000465187 S100PP25815 95 aa13.88□□□□□ -0.19
EDEM1-205ENST00000465187 FCER1GP30273 86 aa13.88□□□□□ -0.19
EDEM1-205ENST00000465187 REG3AQ06141 175 aa13.88□□□□□ -0.19
EDEM1-205ENST00000465187 AMMECR1LQ6DCA0 310 aa13.88□□□□□ -0.19
EDEM1-205ENST00000465187 C9orf163Q8N9P6 203 aa13.88□□□□□ -0.19
EDEM1-205ENST00000465187 KIR2DL4Q99706 377 aa13.88□□□□□ -0.19
EDEM1-205ENST00000465187 NPYP01303 97 aa13.87□□□□□ -0.19
EDEM1-205ENST00000465187 FGF6P10767 208 aa13.87□□□□□ -0.19
EDEM1-205ENST00000465187 RPS10P5Q9NQ39 176 aa13.87□□□□□ -0.19
EDEM1-205ENST00000465187 APOC3P02656 99 aa13.86□□□□□ -0.19
EDEM1-205ENST00000465187 RNASEKQ6P5S7 137 aaKnown RBP13.86□□□□□ -0.19
EDEM1-205ENST00000465187 PRELID3AQ96N28 172 aa13.86□□□□□ -0.19
EDEM1-205ENST00000465187 SLPIP03973 132 aa13.85□□□□□ -0.19
EDEM1-205ENST00000465187 RPL37AP61513 92 aaKnown RBP13.85□□□□□ -0.19
EDEM1-205ENST00000465187 SDIM1Q6ZPB5 146 aa13.85□□□□□ -0.19
EDEM1-205ENST00000465187 TRAV8-4A0A0B4J246 113 aa13.84□□□□□ -0.19
EDEM1-205ENST00000465187 TCAPO15273 167 aa13.84□□□□□ -0.19
EDEM1-205ENST00000465187 ZNF25P17030 456 aaPredicted RBP13.84□□□□□ -0.19
EDEM1-205ENST00000465187 NDUFA5Q16718 116 aa13.84□□□□□ -0.19
EDEM1-205ENST00000465187 DGAT2L7PQ6IED9 249 aa13.84□□□□□ -0.19
EDEM1-205ENST00000465187 SMIM2Q9BVW6 85 aa13.84□□□□□ -0.19
EDEM1-205ENST00000465187 TMEM101Q96IK0 257 aa13.83□□□□□ -0.2
EDEM1-205ENST00000465187 LAMTOR2Q9Y2Q5 125 aa13.83□□□□□ -0.2
EDEM1-205ENST00000465187 PRSS47A8MTI9 375 aa13.82□□□□□ -0.2
EDEM1-205ENST00000465187 MRPL52Q86TS9 123 aaKnown RBP13.82□□□□□ -0.2
EDEM1-205ENST00000465187 SVBPQ8N300 66 aa13.82□□□□□ -0.2
EDEM1-205ENST00000465187 hDV102S1A0JD36 115 aa13.81□□□□□ -0.2
EDEM1-205ENST00000465187 SNAPINO95295 136 aa13.81□□□□□ -0.2
EDEM1-205ENST00000465187 CHTF8P0CG12 524 aa13.81□□□□□ -0.2
EDEM1-205ENST00000465187 OR5A1Q8NGJ0 315 aa13.8□□□□□ -0.2
EDEM1-205ENST00000465187 GNB1LQ9BYB4 327 aa13.8□□□□□ -0.2
EDEM1-205ENST00000465187 IGKV3OR2-268A0A0C4DH90 116 aa13.78□□□□□ -0.2
EDEM1-205ENST00000465187 SMAGPQ0VAQ4 97 aa13.78□□□□□ -0.2
EDEM1-205ENST00000465187 COX19Q49B96 90 aa13.78□□□□□ -0.2
EDEM1-205ENST00000465187 TMEM18Q96B42 140 aa13.78□□□□□ -0.2
EDEM1-205ENST00000465187 MAP1LC3AQ9H492 121 aa13.78□□□□□ -0.2
EDEM1-205ENST00000465187 CDC42SE2Q9NRR3 84 aa13.78□□□□□ -0.2
EDEM1-205ENST00000465187 LOC389332A0A1B0GUA5 103 aa13.77□□□□□ -0.21
EDEM1-205ENST00000465187 OXTP01178 125 aa13.77□□□□□ -0.21
EDEM1-205ENST00000465187 CNBPP62633 177 aaKnown RBP13.77□□□□□ -0.21
EDEM1-205ENST00000465187 C15orf56Q8N910 161 aa13.77□□□□□ -0.21
EDEM1-205ENST00000465187 UBE2D4Q9Y2X8 147 aa13.77□□□□□ -0.21
EDEM1-205ENST00000465187 CSDC2Q9Y534 153 aaKnown RBP13.77□□□□□ -0.21
EDEM1-205ENST00000465187 RAB5AP20339 215 aa13.76□□□□□ -0.21
EDEM1-205ENST00000465187 CIRBPQ14011 172 aaKnown RBP13.76□□□□□ -0.21
EDEM1-205ENST00000465187 SLC7A5P1Q8MH63 180 aa13.76□□□□□ -0.21
EDEM1-205ENST00000465187 ZNF664Q8N3J9 261 aa13.76□□□□□ -0.21
EDEM1-205ENST00000465187 UBR4Q5T4S7 5183 aa13.75□□□□□ -0.21
EDEM1-205ENST00000465187 GAGE12HA6NDE8 117 aa13.75□□□□□ -0.21
EDEM1-205ENST00000465187 KIAA1644Q3SXP7 199 aa13.75□□□□□ -0.21
EDEM1-205ENST00000465187 TIMM21Q9BVV7 248 aa13.75□□□□□ -0.21
EDEM1-205ENST00000465187 Q8N8P6 123 aa13.74□□□□□ -0.21
EDEM1-205ENST00000465187 HIGD2BQ4VC39 106 aa13.73□□□□□ -0.21
EDEM1-205ENST00000465187 CHCHD10Q8WYQ3 142 aaPredicted RBP13.73□□□□□ -0.21
EDEM1-205ENST00000465187 LINC00959A0A1B0GUT2 108 aa13.72□□□□□ -0.21
EDEM1-205ENST00000465187 MT-ND6P03923 174 aa13.72□□□□□ -0.21
EDEM1-205ENST00000465187 RPL39P62891 51 aaKnown RBP13.72□□□□□ -0.21
EDEM1-205ENST00000465187 IGHV3-64A0A075B6Q5 118 aa13.71□□□□□ -0.21
EDEM1-205ENST00000465187 A0A087WYN8 130 aa13.71□□□□□ -0.21
EDEM1-205ENST00000465187 TGIF2-C20orf24A0A0A6YYL0 155 aa13.71□□□□□ -0.21
EDEM1-205ENST00000465187 MT1HL1P0DM35 61 aa13.7□□□□□ -0.22
EDEM1-205ENST00000465187 SPACA4Q8TDM5 124 aa13.7□□□□□ -0.22
EDEM1-205ENST00000465187 MRPL18Q9H0U6 180 aaKnown RBP13.7□□□□□ -0.22
EDEM1-205ENST00000465187 NXT2Q9NPJ8 142 aaKnown RBP13.7□□□□□ -0.22
EDEM1-205ENST00000465187 SPANXA1Q9NS26 97 aa13.7□□□□□ -0.22
EDEM1-205ENST00000465187 K7EMI3 77 aa13.69□□□□□ -0.22
EDEM1-205ENST00000465187 FABP9Q0Z7S8 132 aa13.69□□□□□ -0.22
EDEM1-205ENST00000465187 SS18Q15532 418 aa13.69□□□□□ -0.22
EDEM1-205ENST00000465187 SERTAD4-AS1Q5TG53 156 aa13.69□□□□□ -0.22
EDEM1-205ENST00000465187 ALKBH7Q9BT30 221 aaPredicted RBP13.69□□□□□ -0.22
EDEM1-205ENST00000465187 AP5S1Q9NUS5 200 aa13.69□□□□□ -0.22
EDEM1-205ENST00000465187 IFI27P40305 119 aaPredicted RBP13.68□□□□□ -0.22
EDEM1-205ENST00000465187 Q6ZUT4 128 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 66.5 ms