RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 C18orf65Q6ZTR6 163 aa9.11□□□□□ -0.95
CLCNKA-204ENST00000464764 CHD6Q8TD26 2715 aa9.11□□□□□ -0.95
CLCNKA-204ENST00000464764 SOSTDC1Q6X4U4 206 aa9.11□□□□□ -0.95
CLCNKA-204ENST00000464764 SMCR5Q8TEV8 140 aa9.11□□□□□ -0.95
CLCNKA-204ENST00000464764 HOXD3P31249 432 aaPredicted RBP9.1□□□□□ -0.95
CLCNKA-204ENST00000464764 DEFB112Q30KQ8 113 aa9.1□□□□□ -0.95
CLCNKA-204ENST00000464764 LINC00308Q8TCZ7 52 aa9.1□□□□□ -0.95
CLCNKA-204ENST00000464764 C10orf105Q8TEF2 133 aa9.1□□□□□ -0.95
CLCNKA-204ENST00000464764 FAM236AA0A1B0GUQ0 79 aa9.1□□□□□ -0.95
CLCNKA-204ENST00000464764 FAM236BA0A1B0GV22 79 aa9.1□□□□□ -0.95
CLCNKA-204ENST00000464764 NBPF19A0A087WUL8 3843 aa9.1□□□□□ -0.95
CLCNKA-204ENST00000464764 IGHV3OR16-12A0A075B7B8 117 aa9.09□□□□□ -0.95
CLCNKA-204ENST00000464764 MSMBP08118 114 aa9.09□□□□□ -0.95
CLCNKA-204ENST00000464764 DEFB121Q5J5C9 76 aa9.09□□□□□ -0.95
CLCNKA-204ENST00000464764 DGAT2L7PQ6IED9 249 aa9.09□□□□□ -0.95
CLCNKA-204ENST00000464764 MAPK1IP1LQ8NDC0 245 aa9.09□□□□□ -0.95
CLCNKA-204ENST00000464764 YAE1D1Q9NRH1 226 aa9.09□□□□□ -0.95
CLCNKA-204ENST00000464764 SPANXA1Q9NS26 97 aa9.09□□□□□ -0.95
CLCNKA-204ENST00000464764 LINC00694P0DN24 101 aa9.08□□□□□ -0.96
CLCNKA-204ENST00000464764 ATP5J2P56134 94 aa9.08□□□□□ -0.96
CLCNKA-204ENST00000464764 NRGNQ92686 78 aa9.08□□□□□ -0.96
CLCNKA-204ENST00000464764 TRAV13-1A0A0B4J241 112 aa9.08□□□□□ -0.96
CLCNKA-204ENST00000464764 MYO18BQ8IUG5 2567 aa9.08□□□□□ -0.96
CLCNKA-204ENST00000464764 NDUFA1O15239 70 aa9.08□□□□□ -0.96
CLCNKA-204ENST00000464764 SLURP1P55000 103 aa9.08□□□□□ -0.96
CLCNKA-204ENST00000464764 FN1P02751 2386 aaKnown RBP9.08□□□□□ -0.96
CLCNKA-204ENST00000464764 GNLYP22749 145 aa9.07□□□□□ -0.96
CLCNKA-204ENST00000464764 CCL19Q99731 98 aa9.07□□□□□ -0.96
CLCNKA-204ENST00000464764 EPG5Q9HCE0 2579 aa9.07□□□□□ -0.96
CLCNKA-204ENST00000464764 LINC00242Q5T6M2 205 aa9.07□□□□□ -0.96
CLCNKA-204ENST00000464764 FAM218AQ96MZ4 157 aa9.07□□□□□ -0.96
CLCNKA-204ENST00000464764 LINC01587Q99440 93 aa9.07□□□□□ -0.96
CLCNKA-204ENST00000464764 NF1P21359 2839 aa9.06□□□□□ -0.96
CLCNKA-204ENST00000464764 FAM240AA0A1B0GVK7 77 aa9.06□□□□□ -0.96
CLCNKA-204ENST00000464764 DAZ2Q13117 558 aaKnown RBP9.06□□□□□ -0.96
CLCNKA-204ENST00000464764 PIK3CD-AS1Q5SR53 167 aa9.06□□□□□ -0.96
CLCNKA-204ENST00000464764 DAZ4Q86SG3 579 aaKnown RBP9.06□□□□□ -0.96
CLCNKA-204ENST00000464764 DAZ3Q9NR90 486 aaKnown RBP9.06□□□□□ -0.96
CLCNKA-204ENST00000464764 NAV2Q8IVL1 2488 aa9.06□□□□□ -0.96
CLCNKA-204ENST00000464764 CIRBPQ14011 172 aaKnown RBP9.06□□□□□ -0.96
CLCNKA-204ENST00000464764 Q9HAA7 133 aa9.06□□□□□ -0.96
CLCNKA-204ENST00000464764 TRBV7-7A0A0K0K1E9 115 aa9.05□□□□□ -0.96
CLCNKA-204ENST00000464764 EDA2RQ9HAV5 297 aa9.05□□□□□ -0.96
CLCNKA-204ENST00000464764 KLK5Q9Y337 293 aaPredicted RBP9.05□□□□□ -0.96
CLCNKA-204ENST00000464764 CCDC168Q8NDH2 2452 aa9.05□□□□□ -0.96
CLCNKA-204ENST00000464764 TEX15Q9BXT5 2789 aa9.05□□□□□ -0.96
CLCNKA-204ENST00000464764 COX7A2LO14548 114 aa9.05□□□□□ -0.96
CLCNKA-204ENST00000464764 TIMM17BO60830 172 aa9.05□□□□□ -0.96
CLCNKA-204ENST00000464764 C22orf24Q9Y442 160 aa9.05□□□□□ -0.96
CLCNKA-204ENST00000464764 IGHV3-53P01767 116 aa9.04□□□□□ -0.96
CLCNKA-204ENST00000464764 BAALC-AS2P0C853 105 aa9.04□□□□□ -0.96
CLCNKA-204ENST00000464764 MRPL23Q16540 153 aaKnown RBP9.04□□□□□ -0.96
CLCNKA-204ENST00000464764 PRIMA1Q86XR5 153 aa9.04□□□□□ -0.96
CLCNKA-204ENST00000464764 FAM110AQ9BQ89 295 aa9.04□□□□□ -0.96
CLCNKA-204ENST00000464764 ABCA12Q86UK0 2595 aa9.04□□□□□ -0.96
CLCNKA-204ENST00000464764 TIRAPP58753 221 aa9.03□□□□□ -0.96
CLCNKA-204ENST00000464764 C11orf72Q8NBR9 251 aa9.03□□□□□ -0.96
CLCNKA-204ENST00000464764 PPDPFQ9H3Y8 114 aa9.03□□□□□ -0.96
CLCNKA-204ENST00000464764 IGLV5-45A0A087WSX0 123 aa9.03□□□□□ -0.96
CLCNKA-204ENST00000464764 SMIM1B2RUZ4 78 aa9.03□□□□□ -0.96
CLCNKA-204ENST00000464764 ZNF415Q09FC8 603 aa9.03□□□□□ -0.96
CLCNKA-204ENST00000464764 IGKV3OR2-268A0A0C4DH90 116 aa9.03□□□□□ -0.96
CLCNKA-204ENST00000464764 UCNP55089 124 aa9.03□□□□□ -0.96
CLCNKA-204ENST00000464764 IGLV5-39A0A0G2JS06 123 aa9.02□□□□□ -0.97
CLCNKA-204ENST00000464764 BEAN1Q3B7T3 259 aa9.02□□□□□ -0.97
CLCNKA-204ENST00000464764 XCL2Q9UBD3 114 aa9.02□□□□□ -0.97
CLCNKA-204ENST00000464764 RNF152Q8N8N0 203 aa9.02□□□□□ -0.97
CLCNKA-204ENST00000464764 UBE2E2Q96LR5 201 aa9.02□□□□□ -0.97
CLCNKA-204ENST00000464764 TMEM89A2RUT3 159 aa9.01□□□□□ -0.97
CLCNKA-204ENST00000464764 C9orf153Q5TBE3 101 aa9.01□□□□□ -0.97
CLCNKA-204ENST00000464764 Q96MF0 132 aa9.01□□□□□ -0.97
CLCNKA-204ENST00000464764 LRRK2Q5S007 2527 aa9.01□□□□□ -0.97
CLCNKA-204ENST00000464764 LOC107984640A0A0U1RRK4 108 aa9.01□□□□□ -0.97
CLCNKA-204ENST00000464764 C9orf129Q5T035 196 aaKnown RBP9.01□□□□□ -0.97
CLCNKA-204ENST00000464764 GAGE2AQ6NT46 116 aa9.01□□□□□ -0.97
CLCNKA-204ENST00000464764 NTM-AS1Q6ZSK4 140 aa9.01□□□□□ -0.97
CLCNKA-204ENST00000464764 PKD1L2Q7Z442 2459 aa9□□□□□ -0.97
CLCNKA-204ENST00000464764 ANKRD17O75179 2603 aaKnown RBP9□□□□□ -0.97
CLCNKA-204ENST00000464764 ZFYVE26Q68DK2 2539 aa9□□□□□ -0.97
CLCNKA-204ENST00000464764 B4DSR2 109 aa9□□□□□ -0.97
CLCNKA-204ENST00000464764 HERVK_113P63121 156 aa9□□□□□ -0.97
CLCNKA-204ENST00000464764 TRGV1A0A0A0MS02 117 aa8.99□□□□□ -0.97
CLCNKA-204ENST00000464764 DOPEY1Q5JWR5 2465 aa8.99□□□□□ -0.97
CLCNKA-204ENST00000464764 MAP6D1Q9H9H5 199 aa8.99□□□□□ -0.97
CLCNKA-204ENST00000464764 KHDC1LQ5JSQ8 128 aa8.98□□□□□ -0.97
CLCNKA-204ENST00000464764 LINC00643Q86TS7 51 aa8.98□□□□□ -0.97
CLCNKA-204ENST00000464764 TOMM7Q9P0U1 55 aa8.98□□□□□ -0.97
CLCNKA-204ENST00000464764 F5H768 121 aa8.97□□□□□ -0.97
CLCNKA-204ENST00000464764 CFAP161Q6P656 301 aa8.97□□□□□ -0.97
CLCNKA-204ENST00000464764 DNAJC30Q96LL9 226 aa8.97□□□□□ -0.97
CLCNKA-204ENST00000464764 ZNF702PQ9H963 129 aa8.97□□□□□ -0.97
CLCNKA-204ENST00000464764 ZNF469Q96JG9 3925 aaPredicted RBP8.97□□□□□ -0.97
CLCNKA-204ENST00000464764 ACYP1P07311 99 aa8.97□□□□□ -0.97
CLCNKA-204ENST00000464764 LINC00337Q8N6G1 96 aa8.96□□□□□ -0.97
CLCNKA-204ENST00000464764 SETXQ7Z333 2677 aaKnown RBP8.96□□□□□ -0.97
CLCNKA-204ENST00000464764 Q6ZTI0 123 aa8.96□□□□□ -0.98
CLCNKA-204ENST00000464764 TRACP01848 142 aa8.96□□□□□ -0.98
CLCNKA-204ENST00000464764 ATP5G1P05496 136 aa8.96□□□□□ -0.98
CLCNKA-204ENST00000464764 NBEAL2Q6ZNJ1 2754 aa8.95□□□□□ -0.98
CLCNKA-204ENST00000464764 A0A087WYN8 130 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms