RNA–Protein interactions for RNA: ENST00000463948.1

EGFR-209, Transcript of epidermal growth factor receptor, humanhuman

TSL 3

Gene EGFR, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGFR-209ENST00000463948 ATP5L2Q7Z4Y8 100 aa11.96□□□□□ -0.49
EGFR-209ENST00000463948 MRAP2Q96G30 205 aa11.96□□□□□ -0.49
EGFR-209ENST00000463948 CTDSP1Q9GZU7 261 aa11.96□□□□□ -0.49
EGFR-209ENST00000463948 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.95□□□□□ -0.5
EGFR-209ENST00000463948 IGKV3OR2-268A0A0C4DH90 116 aa11.95□□□□□ -0.5
EGFR-209ENST00000463948 FAM104BQ5XKR9 115 aa11.95□□□□□ -0.5
EGFR-209ENST00000463948 RPL39LQ96EH5 51 aaKnown RBP11.95□□□□□ -0.5
EGFR-209ENST00000463948 IMMP2LQ96T52 175 aa11.95□□□□□ -0.5
EGFR-209ENST00000463948 UBE2L6O14933 153 aa11.94□□□□□ -0.5
EGFR-209ENST00000463948 CIRBPQ14011 172 aaKnown RBP11.94□□□□□ -0.5
EGFR-209ENST00000463948 TRBV6-5A0A0K0K1A5 114 aa11.93□□□□□ -0.5
EGFR-209ENST00000463948 GAGE12HA6NDE8 117 aa11.93□□□□□ -0.5
EGFR-209ENST00000463948 GAS8-AS1O95177 125 aa11.93□□□□□ -0.5
EGFR-209ENST00000463948 AMTP48728 403 aa11.93□□□□□ -0.5
EGFR-209ENST00000463948 Q6ZRU5 148 aa11.93□□□□□ -0.5
EGFR-209ENST00000463948 COTL1Q14019 142 aa11.92□□□□□ -0.5
EGFR-209ENST00000463948 BTF3L4Q96K17 158 aa11.92□□□□□ -0.5
EGFR-209ENST00000463948 C7orf77A4D0Y5 90 aa11.91□□□□□ -0.5
EGFR-209ENST00000463948 SDHAF1A6NFY7 115 aa11.91□□□□□ -0.5
EGFR-209ENST00000463948 RPS10P46783 165 aaKnown RBP11.91□□□□□ -0.5
EGFR-209ENST00000463948 RHEBQ15382 184 aa11.91□□□□□ -0.5
EGFR-209ENST00000463948 MRPL51Q4U2R6 128 aaKnown RBP11.91□□□□□ -0.5
EGFR-209ENST00000463948 TMEM242Q9NWH2 141 aa11.91□□□□□ -0.5
EGFR-209ENST00000463948 SMKR1H3BMG3 65 aa11.9□□□□□ -0.5
EGFR-209ENST00000463948 NCR2O95944 276 aa11.9□□□□□ -0.5
EGFR-209ENST00000463948 PPP1R17O96001 155 aa11.9□□□□□ -0.5
EGFR-209ENST00000463948 COX6A2Q02221 97 aa11.9□□□□□ -0.5
EGFR-209ENST00000463948 HIGD2BQ4VC39 106 aa11.9□□□□□ -0.5
EGFR-209ENST00000463948 SPACA4Q8TDM5 124 aa11.9□□□□□ -0.5
EGFR-209ENST00000463948 ST20Q9HBF5 79 aa11.9□□□□□ -0.5
EGFR-209ENST00000463948 PHOX2AO14813 284 aa11.89□□□□□ -0.51
EGFR-209ENST00000463948 APOC3P02656 99 aa11.89□□□□□ -0.51
EGFR-209ENST00000463948 NDUFA5Q16718 116 aa11.89□□□□□ -0.51
EGFR-209ENST00000463948 C15orf56Q8N910 161 aa11.89□□□□□ -0.51
EGFR-209ENST00000463948 TRAV9-1A0A075B6T8 112 aa11.88□□□□□ -0.51
EGFR-209ENST00000463948 CKS2P33552 79 aa11.88□□□□□ -0.51
EGFR-209ENST00000463948 CFAP161Q6P656 301 aa11.88□□□□□ -0.51
EGFR-209ENST00000463948 NRACQ8N912 160 aa11.88□□□□□ -0.51
EGFR-209ENST00000463948 PRSS3P2Q8NHM4 247 aa11.88□□□□□ -0.51
EGFR-209ENST00000463948 IGKV2-24A0A0C4DH68 120 aa11.87□□□□□ -0.51
EGFR-209ENST00000463948 MAJINQ3KP22 176 aa11.87□□□□□ -0.51
EGFR-209ENST00000463948 SVBPQ8N300 66 aa11.87□□□□□ -0.51
EGFR-209ENST00000463948 RPS10P5Q9NQ39 176 aa11.87□□□□□ -0.51
EGFR-209ENST00000463948 PLAC8Q9NZF1 115 aa11.87□□□□□ -0.51
EGFR-209ENST00000463948 I3L3M4 83 aa11.86□□□□□ -0.51
EGFR-209ENST00000463948 PPBPP02775 128 aa11.86□□□□□ -0.51
EGFR-209ENST00000463948 S100PP25815 95 aa11.86□□□□□ -0.51
EGFR-209ENST00000463948 POLR2KP53803 58 aaKnown RBP11.86□□□□□ -0.51
EGFR-209ENST00000463948 AMMECR1LQ6DCA0 310 aa11.86□□□□□ -0.51
EGFR-209ENST00000463948 RNASEKQ6P5S7 137 aaKnown RBP11.86□□□□□ -0.51
EGFR-209ENST00000463948 C7orf33Q8WU49 177 aa11.86□□□□□ -0.51
EGFR-209ENST00000463948 CHCHD10Q8WYQ3 142 aaPredicted RBP11.86□□□□□ -0.51
EGFR-209ENST00000463948 TRBV24-1A0A075B6N3 115 aa11.85□□□□□ -0.51
EGFR-209ENST00000463948 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.85□□□□□ -0.51
EGFR-209ENST00000463948 TRBV27A0A0K0K1C4 114 aa11.85□□□□□ -0.51
EGFR-209ENST00000463948 IGKV2-29A2NJV5 120 aaPredicted RBP11.85□□□□□ -0.51
EGFR-209ENST00000463948 D6R8Y8 96 aa11.85□□□□□ -0.51
EGFR-209ENST00000463948 SNAPINO95295 136 aa11.85□□□□□ -0.51
EGFR-209ENST00000463948 PMCHP20382 165 aa11.85□□□□□ -0.51
EGFR-209ENST00000463948 SUMO2P61956 95 aaKnown RBP11.85□□□□□ -0.51
EGFR-209ENST00000463948 SLC7A5P1Q8MH63 180 aa11.84□□□□□ -0.51
EGFR-209ENST00000463948 C20orf78Q9BR46 151 aa11.84□□□□□ -0.51
EGFR-209ENST00000463948 VCYO14598 125 aa11.83□□□□□ -0.52
EGFR-209ENST00000463948 TNFRSF6BO95407 300 aa11.83□□□□□ -0.52
EGFR-209ENST00000463948 TSHBP01222 138 aa11.83□□□□□ -0.52
EGFR-209ENST00000463948 APCSP02743 223 aa11.83□□□□□ -0.52
EGFR-209ENST00000463948 ORMDL3Q8N138 153 aa11.83□□□□□ -0.52
EGFR-209ENST00000463948 ODF1Q14990 250 aa11.82□□□□□ -0.52
EGFR-209ENST00000463948 TMEM136Q6ZRR5 245 aa11.82□□□□□ -0.52
EGFR-209ENST00000463948 STPG4Q8N801 248 aa11.82□□□□□ -0.52
EGFR-209ENST00000463948 FGF6P10767 208 aa11.81□□□□□ -0.52
EGFR-209ENST00000463948 RPL32P62910 135 aaKnown RBP11.81□□□□□ -0.52
EGFR-209ENST00000463948 LINC00526Q96FQ7 95 aa11.81□□□□□ -0.52
EGFR-209ENST00000463948 NPYP01303 97 aa11.8□□□□□ -0.52
EGFR-209ENST00000463948 PRELID3AQ96N28 172 aa11.8□□□□□ -0.52
EGFR-209ENST00000463948 TNXBP22105 4242 aa11.8□□□□□ -0.52
EGFR-209ENST00000463948 H7C423 109 aa11.79□□□□□ -0.52
EGFR-209ENST00000463948 ESDP10768 282 aa11.79□□□□□ -0.52
EGFR-209ENST00000463948 XCL1P47992 114 aa11.79□□□□□ -0.52
EGFR-209ENST00000463948 KIR2DL4Q99706 377 aa11.79□□□□□ -0.52
EGFR-209ENST00000463948 LAMTOR2Q9Y2Q5 125 aa11.79□□□□□ -0.52
EGFR-209ENST00000463948 A0A096LNI7 61 aa11.78□□□□□ -0.52
EGFR-209ENST00000463948 GVQW2A0A096LPI5 108 aaPredicted RBP11.78□□□□□ -0.52
EGFR-209ENST00000463948 FCER1GP30273 86 aa11.78□□□□□ -0.52
EGFR-209ENST00000463948 FOXI1Q12951 378 aa11.78□□□□□ -0.52
EGFR-209ENST00000463948 SMIM2Q9BVW6 85 aa11.78□□□□□ -0.52
EGFR-209ENST00000463948 GNB1LQ9BYB4 327 aa11.78□□□□□ -0.52
EGFR-209ENST00000463948 LRP2P98164 4655 aa11.78□□□□□ -0.52
EGFR-209ENST00000463948 PRR3P79522 188 aaKnown RBP11.77□□□□□ -0.53
EGFR-209ENST00000463948 COX19Q49B96 90 aa11.77□□□□□ -0.53
EGFR-209ENST00000463948 TCAPO15273 167 aa11.76□□□□□ -0.53
EGFR-209ENST00000463948 LINC01600Q96MT4 127 aa11.76□□□□□ -0.53
EGFR-209ENST00000463948 CCL25O15444 150 aa11.75□□□□□ -0.53
EGFR-209ENST00000463948 OR5A1Q8NGJ0 315 aa11.75□□□□□ -0.53
EGFR-209ENST00000463948 TGIF2-C20orf24A0A0A6YYL0 155 aa11.74□□□□□ -0.53
EGFR-209ENST00000463948 LINC00959A0A1B0GUT2 108 aa11.74□□□□□ -0.53
EGFR-209ENST00000463948 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
EGFR-209ENST00000463948 MT-ND6P03923 174 aa11.74□□□□□ -0.53
EGFR-209ENST00000463948 TMEM101Q96IK0 257 aa11.74□□□□□ -0.53
EGFR-209ENST00000463948 ZNF25P17030 456 aaPredicted RBP11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms