RNA–Protein interactions for RNA: ENST00000463511.1

SSNA1-203, Transcript of SS nuclear autoantigen 1, humanhuman

TSL 2

Gene SSNA1, Length 570 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSNA1-203ENST00000463511 TMEM243Q9BU79 118 aa15.15■□□□□ 0.02
SSNA1-203ENST00000463511 TMEM262E9PQX1 116 aa15.14■□□□□ 0.01
SSNA1-203ENST00000463511 APCSP02743 223 aa15.14■□□□□ 0.01
SSNA1-203ENST00000463511 RPL32P62910 135 aaKnown RBP15.14■□□□□ 0.01
SSNA1-203ENST00000463511 GAGE6Q13070 117 aa15.14■□□□□ 0.01
SSNA1-203ENST00000463511 SERTAD4-AS1Q5TG53 156 aa15.14■□□□□ 0.01
SSNA1-203ENST00000463511 CIRBP-AS1Q8TBR5 109 aa15.14■□□□□ 0.01
SSNA1-203ENST00000463511 UBE2WQ96B02 151 aa15.14■□□□□ 0.01
SSNA1-203ENST00000463511 FAT3Q8TDW7 4589 aa15.14■□□□□ 0.01
SSNA1-203ENST00000463511 KIAA1644Q3SXP7 199 aa15.13■□□□□ 0.01
SSNA1-203ENST00000463511 CBLN2Q8IUK8 224 aa15.13■□□□□ 0.01
SSNA1-203ENST00000463511 SMCO4Q9NRQ5 59 aa15.13■□□□□ 0.01
SSNA1-203ENST00000463511 MPV17L2Q567V2 206 aa15.12■□□□□ 0.01
SSNA1-203ENST00000463511 CHCHD7Q9BUK0 85 aa15.12■□□□□ 0.01
SSNA1-203ENST00000463511 SMIM2Q9BVW6 85 aa15.12■□□□□ 0.01
SSNA1-203ENST00000463511 LAMTOR2Q9Y2Q5 125 aa15.12■□□□□ 0.01
SSNA1-203ENST00000463511 HMCN2Q8NDA2 5059 aa15.12■□□□□ 0.01
SSNA1-203ENST00000463511 A0A087WX48 190 aa15.11■□□□□ 0.01
SSNA1-203ENST00000463511 PRSS47A8MTI9 375 aa15.11■□□□□ 0.01
SSNA1-203ENST00000463511 MT-ND6P03923 174 aa15.11■□□□□ 0.01
SSNA1-203ENST00000463511 PKIAP61925 76 aa15.11■□□□□ 0.01
SSNA1-203ENST00000463511 MRPL18Q9H0U6 180 aaKnown RBP15.11■□□□□ 0.01
SSNA1-203ENST00000463511 ESDP10768 282 aa15.1■□□□□ 0.01
SSNA1-203ENST00000463511 OXTP01178 125 aa15.09■□□□□ 0.01
SSNA1-203ENST00000463511 RBX1P62877 108 aa15.09■□□□□ 0.01
SSNA1-203ENST00000463511 PKHD1L1Q86WI1 4243 aa15.08■□□□□ 0.01
SSNA1-203ENST00000463511 KIR2DL4Q99706 377 aa15.08■□□□□ 0
SSNA1-203ENST00000463511 IGKV2D-29A0A075B6S2 120 aaPredicted RBP15.07■□□□□ 0
SSNA1-203ENST00000463511 IGKV2-29A2NJV5 120 aaPredicted RBP15.07■□□□□ 0
SSNA1-203ENST00000463511 UBE2L6O14933 153 aa15.07■□□□□ 0
SSNA1-203ENST00000463511 FCER1GP30273 86 aa15.07■□□□□ 0
SSNA1-203ENST00000463511 FABP9Q0Z7S8 132 aa15.07■□□□□ 0
SSNA1-203ENST00000463511 MAP1LC3AQ9H492 121 aa15.07■□□□□ 0
SSNA1-203ENST00000463511 TRAPPC1Q9Y5R8 145 aa15.07■□□□□ 0
SSNA1-203ENST00000463511 LOC389332A0A1B0GUA5 103 aa15.06■□□□□ 0
SSNA1-203ENST00000463511 A0A1B0GUV1 79 aa15.06■□□□□ 0
SSNA1-203ENST00000463511 H7C423 109 aa15.06■□□□□ 0
SSNA1-203ENST00000463511 ALKBH7Q9BT30 221 aaPredicted RBP15.06■□□□□ 0
SSNA1-203ENST00000463511 C1orf43Q9BWL3 253 aa15.05■□□□□ -0
SSNA1-203ENST00000463511 UBR4Q5T4S7 5183 aa15.04■□□□□ -0
SSNA1-203ENST00000463511 IGLV4-60A0A075B6I1 120 aa15.04■□□□□ -0
SSNA1-203ENST00000463511 TCAPO15273 167 aa15.04■□□□□ -0
SSNA1-203ENST00000463511 ANGP03950 147 aaKnown RBP15.04■□□□□ -0
SSNA1-203ENST00000463511 Q0VG73 95 aa15.04■□□□□ -0
SSNA1-203ENST00000463511 C20orf203Q8NBC4 194 aa15.04■□□□□ -0
SSNA1-203ENST00000463511 C14orf177Q52M58 125 aa15.03■□□□□ -0
SSNA1-203ENST00000463511 Q8N8P6 123 aa15.03■□□□□ -0
SSNA1-203ENST00000463511 FGF6P10767 208 aa15.02■□□□□ -0
SSNA1-203ENST00000463511 ENHOQ6UWT2 76 aa15.02■□□□□ -0
SSNA1-203ENST00000463511 PLA2G2DQ9UNK4 145 aa15.02■□□□□ -0
SSNA1-203ENST00000463511 SCO1O75880 301 aa15.01□□□□□ -0.01
SSNA1-203ENST00000463511 CRPP02741 224 aa15.01□□□□□ -0.01
SSNA1-203ENST00000463511 RPL37AP61513 92 aaKnown RBP15.01□□□□□ -0.01
SSNA1-203ENST00000463511 AMMECR1LQ6DCA0 310 aa15□□□□□ -0.01
SSNA1-203ENST00000463511 COLCA2A8K830 154 aa14.99□□□□□ -0.01
SSNA1-203ENST00000463511 RAB5AP20339 215 aa14.99□□□□□ -0.01
SSNA1-203ENST00000463511 IFI27P40305 119 aaPredicted RBP14.99□□□□□ -0.01
SSNA1-203ENST00000463511 RNASEKQ6P5S7 137 aaKnown RBP14.99□□□□□ -0.01
SSNA1-203ENST00000463511 LINC00269Q8N2A0 174 aa14.99□□□□□ -0.01
SSNA1-203ENST00000463511 NXT2Q9NPJ8 142 aaKnown RBP14.99□□□□□ -0.01
SSNA1-203ENST00000463511 PRR34Q9NV39 138 aa14.99□□□□□ -0.01
SSNA1-203ENST00000463511 USP17L23D6RBM5 183 aa14.98□□□□□ -0.01
SSNA1-203ENST00000463511 ZNF25P17030 456 aaPredicted RBP14.98□□□□□ -0.01
SSNA1-203ENST00000463511 HNRNPA3P51991 378 aaKnown RBP14.98□□□□□ -0.01
SSNA1-203ENST00000463511 MRPL52Q86TS9 123 aaKnown RBP14.98□□□□□ -0.01
SSNA1-203ENST00000463511 CLPSL2Q6UWE3 100 aa14.97□□□□□ -0.01
SSNA1-203ENST00000463511 TMEM18Q96B42 140 aa14.96□□□□□ -0.01
SSNA1-203ENST00000463511 UBE2D4Q9Y2X8 147 aa14.96□□□□□ -0.01
SSNA1-203ENST00000463511 RPL39P62891 51 aaKnown RBP14.95□□□□□ -0.02
SSNA1-203ENST00000463511 REG3AQ06141 175 aa14.95□□□□□ -0.02
SSNA1-203ENST00000463511 PRSS3P2Q8NHM4 247 aa14.95□□□□□ -0.02
SSNA1-203ENST00000463511 K7EMI3 77 aa14.94□□□□□ -0.02
SSNA1-203ENST00000463511 ATP6V1G1O75348 118 aa14.94□□□□□ -0.02
SSNA1-203ENST00000463511 PRSS1P07477 247 aa14.94□□□□□ -0.02
SSNA1-203ENST00000463511 S100A1P23297 94 aa14.94□□□□□ -0.02
SSNA1-203ENST00000463511 MIAQ16674 131 aa14.94□□□□□ -0.02
SSNA1-203ENST00000463511 OR5A1Q8NGJ0 315 aa14.94□□□□□ -0.02
SSNA1-203ENST00000463511 TMEM101Q96IK0 257 aa14.94□□□□□ -0.02
SSNA1-203ENST00000463511 TIMM21Q9BVV7 248 aa14.94□□□□□ -0.02
SSNA1-203ENST00000463511 CSDC2Q9Y534 153 aaKnown RBP14.94□□□□□ -0.02
SSNA1-203ENST00000463511 LINC01546A6NGU7 62 aa14.93□□□□□ -0.02
SSNA1-203ENST00000463511 C18orf32Q8TCD1 76 aa14.93□□□□□ -0.02
SSNA1-203ENST00000463511 CDC42SE2Q9NRR3 84 aa14.93□□□□□ -0.02
SSNA1-203ENST00000463511 ORMDL2Q53FV1 153 aa14.92□□□□□ -0.02
SSNA1-203ENST00000463511 SMAGPQ0VAQ4 97 aa14.91□□□□□ -0.02
SSNA1-203ENST00000463511 DGAT2L7PQ6IED9 249 aa14.91□□□□□ -0.02
SSNA1-203ENST00000463511 ZNF664Q8N3J9 261 aa14.91□□□□□ -0.02
SSNA1-203ENST00000463511 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.91□□□□□ -0.02
SSNA1-203ENST00000463511 TRGC2P03986 189 aa14.9□□□□□ -0.02
SSNA1-203ENST00000463511 KRTAP26-1Q6PEX3 210 aa14.9□□□□□ -0.02
SSNA1-203ENST00000463511 C9orf163Q8N9P6 203 aa14.9□□□□□ -0.02
SSNA1-203ENST00000463511 FAM104AQ969W3 186 aa14.9□□□□□ -0.02
SSNA1-203ENST00000463511 PANO1I0J062 215 aa14.89□□□□□ -0.03
SSNA1-203ENST00000463511 URB1-AS1Q96HZ7 61 aa14.89□□□□□ -0.03
SSNA1-203ENST00000463511 TRAV8-4A0A0B4J246 113 aa14.88□□□□□ -0.03
SSNA1-203ENST00000463511 IGKV3OR2-268A0A0C4DH90 116 aa14.88□□□□□ -0.03
SSNA1-203ENST00000463511 C2orf66Q6UXQ4 117 aa14.88□□□□□ -0.03
SSNA1-203ENST00000463511 SPANXA1Q9NS26 97 aa14.88□□□□□ -0.03
SSNA1-203ENST00000463511 IGLV10-54A0A075B6I4 117 aa14.87□□□□□ -0.03
SSNA1-203ENST00000463511 Q6ZUT4 128 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms