RNA–Protein interactions for RNA: ENST00000462165.2

CBX3-205, Transcript of chromobox 3, humanhuman

TSL 3

Gene CBX3, Length 949 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-205ENST00000462165 SDHAF1A6NFY7 115 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 CAMPP49913 170 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 CCL20P78556 96 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 TWIST1Q15672 202 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 CD164L2Q6UWJ8 174 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 PRR26Q8N8Z3 221 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 ISOC2Q96AB3 205 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 RPL39LQ96EH5 51 aaKnown RBP6.6□□□□□ -1.35
CBX3-205ENST00000462165 TMEM101Q96IK0 257 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 MANBALQ9NQG1 85 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 FAT4Q6V0I7 4981 aa6.6□□□□□ -1.35
CBX3-205ENST00000462165 RAB19A4D1S5 217 aa6.59□□□□□ -1.35
CBX3-205ENST00000462165 GNG4P50150 75 aa6.59□□□□□ -1.35
CBX3-205ENST00000462165 SS18Q15532 418 aa6.59□□□□□ -1.35
CBX3-205ENST00000462165 C9orf116Q5BN46 136 aaPredicted RBP6.59□□□□□ -1.35
CBX3-205ENST00000462165 C1orf137Q5JT78 98 aa6.59□□□□□ -1.35
CBX3-205ENST00000462165 BIN3Q9NQY0 253 aa6.59□□□□□ -1.35
CBX3-205ENST00000462165 IGLV4-69A0A075B6H9 119 aa6.58□□□□□ -1.36
CBX3-205ENST00000462165 A0A0U1RQV1 116 aa6.58□□□□□ -1.36
CBX3-205ENST00000462165 BCL2P10415 239 aa6.58□□□□□ -1.36
CBX3-205ENST00000462165 ESDP10768 282 aa6.58□□□□□ -1.36
CBX3-205ENST00000462165 EIF5AP63241 154 aaKnown RBP6.58□□□□□ -1.36
CBX3-205ENST00000462165 ZNF345Q14585 488 aa6.58□□□□□ -1.36
CBX3-205ENST00000462165 EIF5AL1Q6IS14 154 aaKnown RBP6.58□□□□□ -1.36
CBX3-205ENST00000462165 TEX261Q6UWH6 196 aa6.58□□□□□ -1.36
CBX3-205ENST00000462165 NUP35Q8NFH5 326 aa6.58□□□□□ -1.36
CBX3-205ENST00000462165 DIRC1Q969H9 104 aa6.58□□□□□ -1.36
CBX3-205ENST00000462165 GNG13Q9P2W3 67 aa6.58□□□□□ -1.36
CBX3-205ENST00000462165 TRBV20OR9-2A0A075B6H5 130 aa6.57□□□□□ -1.36
CBX3-205ENST00000462165 I3L3M4 83 aa6.57□□□□□ -1.36
CBX3-205ENST00000462165 PMCHP20382 165 aa6.57□□□□□ -1.36
CBX3-205ENST00000462165 PHF5AQ7RTV0 110 aaKnown RBP6.57□□□□□ -1.36
CBX3-205ENST00000462165 MRPL52Q86TS9 123 aaKnown RBP6.57□□□□□ -1.36
CBX3-205ENST00000462165 NUDT10Q8NFP7 164 aa6.57□□□□□ -1.36
CBX3-205ENST00000462165 NUDT11Q96G61 164 aa6.57□□□□□ -1.36
CBX3-205ENST00000462165 FAM210AQ96ND0 272 aa6.57□□□□□ -1.36
CBX3-205ENST00000462165 CDC42SE2Q9NRR3 84 aa6.57□□□□□ -1.36
CBX3-205ENST00000462165 IGLV1-50A0A075B6I6 118 aa6.56□□□□□ -1.36
CBX3-205ENST00000462165 TRBV6-5A0A0K0K1A5 114 aa6.56□□□□□ -1.36
CBX3-205ENST00000462165 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.56□□□□□ -1.36
CBX3-205ENST00000462165 APOMO95445 188 aa6.56□□□□□ -1.36
CBX3-205ENST00000462165 IGLV7-43P04211 117 aa6.56□□□□□ -1.36
CBX3-205ENST00000462165 MEF2BQ02080 365 aaPredicted RBP6.56□□□□□ -1.36
CBX3-205ENST00000462165 SMIM15Q7Z3B0 74 aa6.56□□□□□ -1.36
CBX3-205ENST00000462165 C2orf48Q96LS8 159 aa6.56□□□□□ -1.36
CBX3-205ENST00000462165 CAMK2N2Q96S95 79 aa6.56□□□□□ -1.36
CBX3-205ENST00000462165 TRAV1-1A0A0B4J248 108 aa6.55□□□□□ -1.36
CBX3-205ENST00000462165 H0Y9J4 135 aa6.55□□□□□ -1.36
CBX3-205ENST00000462165 SMLR1H3BR10 107 aa6.55□□□□□ -1.36
CBX3-205ENST00000462165 PDE6DO43924 150 aa6.55□□□□□ -1.36
CBX3-205ENST00000462165 TSHBP01222 138 aa6.55□□□□□ -1.36
CBX3-205ENST00000462165 MALP21145 153 aa6.55□□□□□ -1.36
CBX3-205ENST00000462165 FOXA3P55318 350 aaPredicted RBP6.55□□□□□ -1.36
CBX3-205ENST00000462165 MRAP2Q96G30 205 aa6.55□□□□□ -1.36
CBX3-205ENST00000462165 KANTRA0A1W2PQU2 76 aa6.54□□□□□ -1.36
CBX3-205ENST00000462165 C1orf196B1AJZ1 125 aa6.54□□□□□ -1.36
CBX3-205ENST00000462165 COX7A2LO14548 114 aa6.54□□□□□ -1.36
CBX3-205ENST00000462165 BCL2L11O43521 198 aa6.54□□□□□ -1.36
CBX3-205ENST00000462165 RPL18AQ02543 176 aaKnown RBP6.54□□□□□ -1.36
CBX3-205ENST00000462165 PRR4Q16378 134 aa6.54□□□□□ -1.36
CBX3-205ENST00000462165 RPP21Q9H633 154 aaKnown RBP6.54□□□□□ -1.36
CBX3-205ENST00000462165 MED9Q9NWA0 146 aa6.54□□□□□ -1.36
CBX3-205ENST00000462165 TMEM242Q9NWH2 141 aa6.54□□□□□ -1.36
CBX3-205ENST00000462165 C7orf77A4D0Y5 90 aa6.53□□□□□ -1.36
CBX3-205ENST00000462165 HMSDA8MTL9 139 aa6.53□□□□□ -1.36
CBX3-205ENST00000462165 KRTAP1-4P0C5Y4 121 aa6.53□□□□□ -1.36
CBX3-205ENST00000462165 RNF151Q2KHN1 245 aa6.53□□□□□ -1.36
CBX3-205ENST00000462165 TSKUQ8WUA8 353 aa6.53□□□□□ -1.36
CBX3-205ENST00000462165 RNASE7Q9H1E1 156 aaKnown RBP6.53□□□□□ -1.36
CBX3-205ENST00000462165 MUC17Q685J3 4493 aa6.52□□□□□ -1.36
CBX3-205ENST00000462165 A0A087WZ39 114 aa6.52□□□□□ -1.37
CBX3-205ENST00000462165 TEX46H3BTG2 121 aa6.52□□□□□ -1.37
CBX3-205ENST00000462165 POLR2KP53803 58 aaKnown RBP6.52□□□□□ -1.37
CBX3-205ENST00000462165 OPRPNQ99935 248 aaPredicted RBP6.52□□□□□ -1.37
CBX3-205ENST00000462165 ST20Q9HBF5 79 aa6.52□□□□□ -1.37
CBX3-205ENST00000462165 TRBV27A0A0K0K1C4 114 aa6.51□□□□□ -1.37
CBX3-205ENST00000462165 K7EN84 100 aa6.51□□□□□ -1.37
CBX3-205ENST00000462165 KRTAP11-1Q8IUC1 163 aa6.51□□□□□ -1.37
CBX3-205ENST00000462165 CSDC2Q9Y534 153 aaKnown RBP6.51□□□□□ -1.37
CBX3-205ENST00000462165 RPL13AP40429 203 aaKnown RBP6.5□□□□□ -1.37
CBX3-205ENST00000462165 SPAG11BQ08648 103 aa6.5□□□□□ -1.37
CBX3-205ENST00000462165 C5orf38Q86SI9 138 aa6.5□□□□□ -1.37
CBX3-205ENST00000462165 OCC1Q8TAD7 63 aa6.5□□□□□ -1.37
CBX3-205ENST00000462165 KRTAP4-9Q9BYQ8 210 aa6.5□□□□□ -1.37
CBX3-205ENST00000462165 MRPL35Q9NZE8 188 aaKnown RBP6.5□□□□□ -1.37
CBX3-205ENST00000462165 FAM168BA1KXE4 195 aa6.49□□□□□ -1.37
CBX3-205ENST00000462165 F8WDY8 70 aa6.49□□□□□ -1.37
CBX3-205ENST00000462165 UBE2D1P51668 147 aa6.49□□□□□ -1.37
CBX3-205ENST00000462165 SMAGPQ0VAQ4 97 aa6.49□□□□□ -1.37
CBX3-205ENST00000462165 OR10D4PQ8NGN7 298 aa6.49□□□□□ -1.37
CBX3-205ENST00000462165 IMMP2LQ96T52 175 aa6.49□□□□□ -1.37
CBX3-205ENST00000462165 UBE2D4Q9Y2X8 147 aa6.49□□□□□ -1.37
CBX3-205ENST00000462165 TRAV13-1A0A0B4J241 112 aa6.48□□□□□ -1.37
CBX3-205ENST00000462165 GATCO43716 136 aaKnown RBP6.48□□□□□ -1.37
CBX3-205ENST00000462165 TLX1NBP0CAT3 122 aa6.48□□□□□ -1.37
CBX3-205ENST00000462165 RNASE13Q5GAN3 156 aaKnown RBP6.48□□□□□ -1.37
CBX3-205ENST00000462165 TMEM191AQ9H0A3 160 aa6.48□□□□□ -1.37
CBX3-205ENST00000462165 A8MWL6 223 aa6.47□□□□□ -1.37
CBX3-205ENST00000462165 FAM231DQ6ZW35 169 aa6.47□□□□□ -1.37
CBX3-205ENST00000462165 CARHSP1Q9Y2V2 147 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms