RNA–Protein interactions for RNA: ENST00000461159.6

HDAC9-219, Transcript of histone deacetylase 9, humanhuman

TSL 2

Gene HDAC9, Length 2,557 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-219ENST00000461159 TRAV41A0A0B4J266 112 aa6.33□□□□□ -1.4
HDAC9-219ENST00000461159 ERCC8Q13216 396 aa6.33□□□□□ -1.4
HDAC9-219ENST00000461159 SDIM1Q6ZPB5 146 aa6.33□□□□□ -1.4
HDAC9-219ENST00000461159 FP248Q71RG6 208 aaPredicted RBP6.33□□□□□ -1.4
HDAC9-219ENST00000461159 NDUFA11Q86Y39 141 aa6.33□□□□□ -1.4
HDAC9-219ENST00000461159 SLC50A1Q9BRV3 221 aa6.33□□□□□ -1.4
HDAC9-219ENST00000461159 ESM1Q9NQ30 184 aa6.33□□□□□ -1.4
HDAC9-219ENST00000461159 TRAV12-1A0A0B4J245 112 aa6.33□□□□□ -1.4
HDAC9-219ENST00000461159 ATXN8Q156A1 80 aa6.33□□□□□ -1.4
HDAC9-219ENST00000461159 CD164L2Q6UWJ8 174 aa6.33□□□□□ -1.4
HDAC9-219ENST00000461159 INAFM1C9JVW0 142 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 F8VRH5 84 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 CTSGP08311 255 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 CRIP2P52943 208 aaPredicted RBP6.32□□□□□ -1.4
HDAC9-219ENST00000461159 NRACQ8N912 160 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 METTL26Q96S19 204 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 DAZ1Q9NQZ3 744 aaKnown RBP6.32□□□□□ -1.4
HDAC9-219ENST00000461159 TRBV12-3P01733 135 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 IGHG2P01859 326 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 TRGV3P03979 118 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 SPANXN1Q5VSR9 72 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 CLEC19AQ6UXS0 136 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 C11orf44Q8N8P7 122 aa6.32□□□□□ -1.4
HDAC9-219ENST00000461159 IGHV3OR16-13A0A075B7E8 117 aa6.31□□□□□ -1.4
HDAC9-219ENST00000461159 IGHV3-74A0A0B4J1X5 117 aa6.31□□□□□ -1.4
HDAC9-219ENST00000461159 IGKV3D-20A0A0C4DH25 116 aa6.31□□□□□ -1.4
HDAC9-219ENST00000461159 KNCNA6PVL3 124 aa6.31□□□□□ -1.4
HDAC9-219ENST00000461159 IGF1P05019 195 aa6.31□□□□□ -1.4
HDAC9-219ENST00000461159 ORMDL2Q53FV1 153 aa6.31□□□□□ -1.4
HDAC9-219ENST00000461159 PRAC2D3DTV9 90 aa6.31□□□□□ -1.4
HDAC9-219ENST00000461159 SFTA2Q6UW10 78 aa6.31□□□□□ -1.4
HDAC9-219ENST00000461159 IGHV4-4A0A075B6R2 117 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 IGHV3-49A0A0A0MS15 119 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 DNAJC9-AS1A6NH13 148 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 C19orf54Q5BKX5 351 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 C9orf139Q6ZV77 190 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 SCGB3A1Q96QR1 104 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 SMIM2Q9BVW6 85 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 STAB1Q9NY15 2570 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 IGHV3-66A0A0C4DH42 116 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 IGHV7-4-1A0A0J9YVY3 117 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 TRBV7-6A0A0J9YX20 115 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 H3BS24 57 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 BUB3O43684 328 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 SYNJ2BPP57105 145 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 DAZ2Q13117 558 aaKnown RBP6.3□□□□□ -1.4
HDAC9-219ENST00000461159 DAZ4Q86SG3 579 aaKnown RBP6.3□□□□□ -1.4
HDAC9-219ENST00000461159 CCDC140Q96MF4 163 aa6.3□□□□□ -1.4
HDAC9-219ENST00000461159 DAZ3Q9NR90 486 aaKnown RBP6.3□□□□□ -1.4
HDAC9-219ENST00000461159 C11orf45Q8TAV5 145 aa6.29□□□□□ -1.4
HDAC9-219ENST00000461159 C11orf21Q9P2W6 132 aa6.29□□□□□ -1.4
HDAC9-219ENST00000461159 PAX4O43316 350 aa6.29□□□□□ -1.4
HDAC9-219ENST00000461159 ZNF22P17026 224 aaPredicted RBP6.29□□□□□ -1.4
HDAC9-219ENST00000461159 TOMM6Q96B49 74 aa6.29□□□□□ -1.4
HDAC9-219ENST00000461159 UBE2E2Q96LR5 201 aa6.29□□□□□ -1.4
HDAC9-219ENST00000461159 ZNF702PQ9H963 129 aa6.29□□□□□ -1.4
HDAC9-219ENST00000461159 PRO1854Q9UHT4 67 aa6.29□□□□□ -1.4
HDAC9-219ENST00000461159 COL6A5A8TX70 2615 aa6.29□□□□□ -1.4
HDAC9-219ENST00000461159 HOXD3P31249 432 aaPredicted RBP6.28□□□□□ -1.4
HDAC9-219ENST00000461159 SUMO2P61956 95 aaKnown RBP6.28□□□□□ -1.4
HDAC9-219ENST00000461159 C2orf82Q6UX34 121 aa6.28□□□□□ -1.4
HDAC9-219ENST00000461159 SCGB1D4Q6XE38 83 aa6.28□□□□□ -1.4
HDAC9-219ENST00000461159 C18orf65Q6ZTR6 163 aa6.28□□□□□ -1.4
HDAC9-219ENST00000461159 ZFAND3Q9H8U3 227 aa6.28□□□□□ -1.4
HDAC9-219ENST00000461159 ZNF580Q9UK33 172 aa6.28□□□□□ -1.4
HDAC9-219ENST00000461159 U3KQE9 123 aa6.28□□□□□ -1.4
HDAC9-219ENST00000461159 FBN1P35555 2871 aaKnown RBP6.27□□□□□ -1.41
HDAC9-219ENST00000461159 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
HDAC9-219ENST00000461159 C9orf47Q6ZRZ4 202 aa6.27□□□□□ -1.41
HDAC9-219ENST00000461159 TMEM243Q9BU79 118 aa6.27□□□□□ -1.41
HDAC9-219ENST00000461159 H3BUA1 57 aa6.27□□□□□ -1.41
HDAC9-219ENST00000461159 DEFB136Q30KP8 78 aa6.27□□□□□ -1.41
HDAC9-219ENST00000461159 TRBV7-1A0A0A6YYK4 115 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 A0A0B4J2C4 111 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 FAM223BA6NKX1 122 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 PPP1R17O96001 155 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 VPREB1P12018 145 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 FHL2Q14192 279 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 Q6ZSV7 163 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 FAM223AQ8IWN6 122 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 EEF1AKMT3Q96AZ1 226 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 LENEPQ9Y5L5 61 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 PLAC8L1A1L4L8 177 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 CFHR3Q02985 330 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 C2orf66Q6UXQ4 117 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 UNQ9165/PRO28630Q6UXU0 137 aa6.26□□□□□ -1.41
HDAC9-219ENST00000461159 M0R381 172 aa6.25□□□□□ -1.41
HDAC9-219ENST00000461159 IGLV1-40P01703 118 aa6.25□□□□□ -1.41
HDAC9-219ENST00000461159 S100A4P26447 101 aaKnown RBP6.25□□□□□ -1.41
HDAC9-219ENST00000461159 NSUN5P1Q3KNT7 163 aa6.25□□□□□ -1.41
HDAC9-219ENST00000461159 PAPPA-AS1Q5QFB9 102 aa6.25□□□□□ -1.41
HDAC9-219ENST00000461159 IGKV3-7A0A075B6H7 116 aa6.25□□□□□ -1.41
HDAC9-219ENST00000461159 CLPSL1A2RUU4 121 aa6.25□□□□□ -1.41
HDAC9-219ENST00000461159 CFC1BP0CG36 223 aa6.25□□□□□ -1.41
HDAC9-219ENST00000461159 CFC1P0CG37 223 aa6.25□□□□□ -1.41
HDAC9-219ENST00000461159 SMCR5Q8TEV8 140 aa6.25□□□□□ -1.41
HDAC9-219ENST00000461159 APOC4P55056 127 aa6.24□□□□□ -1.41
HDAC9-219ENST00000461159 SNRPD3P62318 126 aaKnown RBP6.24□□□□□ -1.41
HDAC9-219ENST00000461159 TRAV21A0A0B4J279 112 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms