RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 IGHV3-33P01772 117 aa7.51□□□□□ -1.21
SMNDC1-203ENST00000460483 IGHV3-30-3P0DP02 117 aa7.51□□□□□ -1.21
SMNDC1-203ENST00000460483 IGHV3-30-5P0DP03 117 aa7.51□□□□□ -1.21
SMNDC1-203ENST00000460483 RBX1P62877 108 aa7.51□□□□□ -1.21
SMNDC1-203ENST00000460483 C2orf66Q6UXQ4 117 aa7.51□□□□□ -1.21
SMNDC1-203ENST00000460483 TMEM141Q96I45 108 aa7.51□□□□□ -1.21
SMNDC1-203ENST00000460483 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.5□□□□□ -1.21
SMNDC1-203ENST00000460483 IGKV2-29A2NJV5 120 aaPredicted RBP7.5□□□□□ -1.21
SMNDC1-203ENST00000460483 HBDP02042 147 aa7.5□□□□□ -1.21
SMNDC1-203ENST00000460483 MIAQ16674 131 aa7.5□□□□□ -1.21
SMNDC1-203ENST00000460483 MPV17L2Q567V2 206 aa7.5□□□□□ -1.21
SMNDC1-203ENST00000460483 C2orf88Q9BSF0 95 aa7.5□□□□□ -1.21
SMNDC1-203ENST00000460483 ATP5LO75964 103 aa7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 MRPS36P82909 103 aaKnown RBP7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 C1orf134Q5TEV5 83 aa7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 ERASQ7Z444 233 aa7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 ZNF664Q8N3J9 261 aa7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 TOMM6Q96B49 74 aa7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 SCGB3A1Q96QR1 104 aa7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 TIMM17AQ99595 171 aa7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 KLK12Q9UKR0 248 aa7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 UBE2D4Q9Y2X8 147 aa7.49□□□□□ -1.21
SMNDC1-203ENST00000460483 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.48□□□□□ -1.21
SMNDC1-203ENST00000460483 REG3AQ06141 175 aa7.48□□□□□ -1.21
SMNDC1-203ENST00000460483 SS18Q15532 418 aa7.48□□□□□ -1.21
SMNDC1-203ENST00000460483 Q8N976 141 aa7.48□□□□□ -1.21
SMNDC1-203ENST00000460483 DEFB104AQ8WTQ1 72 aa7.48□□□□□ -1.21
SMNDC1-203ENST00000460483 UBE2WQ96B02 151 aa7.48□□□□□ -1.21
SMNDC1-203ENST00000460483 C1orf43Q9BWL3 253 aa7.48□□□□□ -1.21
SMNDC1-203ENST00000460483 VCX2Q9H322 139 aa7.48□□□□□ -1.21
SMNDC1-203ENST00000460483 NACAE9PAV3 2078 aa7.48□□□□□ -1.21
SMNDC1-203ENST00000460483 EREGO14944 169 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 PSCAO43653 123 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST1H2BKO60814 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 S100A6P06703 90 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST1H2BJP06899 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST1H2BOP23527 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST1H2BBP33778 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST1H2BDP58876 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST1H2BCP62807 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 SEC11AP67812 179 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST2H2BEQ16778 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 TEX43Q6ZNM6 134 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 LINC00269Q8N2A0 174 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 C6orf223Q8N319 242 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST1H2BHQ93079 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST1H2BNQ99877 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HIST1H2BMQ99879 126 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 CDC42SE2Q9NRR3 84 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 PRR34Q9NV39 138 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 HSPB8Q9UJY1 196 aa7.47□□□□□ -1.21
SMNDC1-203ENST00000460483 M0R2N4 97 aa7.46□□□□□ -1.22
SMNDC1-203ENST00000460483 Q6ZR54 194 aa7.46□□□□□ -1.22
SMNDC1-203ENST00000460483 RPL39P62891 51 aaKnown RBP7.45□□□□□ -1.22
SMNDC1-203ENST00000460483 PACRGQ96M98 296 aaPredicted RBP7.45□□□□□ -1.22
SMNDC1-203ENST00000460483 IGLV4-60A0A075B6I1 120 aa7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 IGKV2D-24A0A075B6R9 120 aa7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 IFITM10A6NMD0 228 aa7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 EIF4EBP3O60516 100 aaPredicted RBP7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 SERF1AO75920 110 aa7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 LEPROTL1O95214 131 aa7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 COA6Q5JTJ3 125 aaKnown RBP7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 LINC00336Q6ZUF6 198 aa7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 Q9HAA7 133 aa7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 DNAH7Q8WXX0 4024 aa7.44□□□□□ -1.22
SMNDC1-203ENST00000460483 IGIPA6NJ69 53 aa7.43□□□□□ -1.22
SMNDC1-203ENST00000460483 NDUFA6P56556 154 aa7.43□□□□□ -1.22
SMNDC1-203ENST00000460483 CFAP161Q6P656 301 aa7.43□□□□□ -1.22
SMNDC1-203ENST00000460483 CSMD3Q7Z407 3707 aa7.43□□□□□ -1.22
SMNDC1-203ENST00000460483 IGLV4-3A0A075B6K6 122 aa7.42□□□□□ -1.22
SMNDC1-203ENST00000460483 IGKV3OR2-268A0A0C4DH90 116 aa7.42□□□□□ -1.22
SMNDC1-203ENST00000460483 PRSS1P07477 247 aa7.42□□□□□ -1.22
SMNDC1-203ENST00000460483 S100A2P29034 98 aa7.42□□□□□ -1.22
SMNDC1-203ENST00000460483 AKR1D1P51857 326 aa7.42□□□□□ -1.22
SMNDC1-203ENST00000460483 PMVKQ15126 192 aa7.42□□□□□ -1.22
SMNDC1-203ENST00000460483 C14orf177Q52M58 125 aa7.42□□□□□ -1.22
SMNDC1-203ENST00000460483 TENM2Q9NT68 2774 aa7.42□□□□□ -1.22
SMNDC1-203ENST00000460483 TRAV13-1A0A0B4J241 112 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 LINC00959A0A1B0GUT2 108 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 PDZD11Q5EBL8 140 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 CD164L2Q6UWJ8 174 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 ENHOQ6UWT2 76 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 Q6ZUT4 128 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 IFI27L1Q96BM0 104 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 URB1-AS1Q96HZ7 61 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 MAP1LC3CQ9BXW4 147 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 GEMIN7Q9H840 131 aaKnown RBP7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 STARD9Q9P2P6 4700 aa7.41□□□□□ -1.22
SMNDC1-203ENST00000460483 APOMO95445 188 aa7.4□□□□□ -1.22
SMNDC1-203ENST00000460483 HERVK_113P63121 156 aa7.4□□□□□ -1.22
SMNDC1-203ENST00000460483 CLPSL2Q6UWE3 100 aa7.4□□□□□ -1.22
SMNDC1-203ENST00000460483 CHCHD10Q8WYQ3 142 aaPredicted RBP7.4□□□□□ -1.22
SMNDC1-203ENST00000460483 AMELXQ99217 191 aa7.4□□□□□ -1.22
SMNDC1-203ENST00000460483 DYNC2H1Q8NCM8 4307 aaKnown RBP7.4□□□□□ -1.23
SMNDC1-203ENST00000460483 MALP21145 153 aa7.39□□□□□ -1.23
SMNDC1-203ENST00000460483 PMCHL1Q16048 86 aa7.39□□□□□ -1.23
SMNDC1-203ENST00000460483 FAM19A2Q8N3H0 131 aa7.39□□□□□ -1.23
SMNDC1-203ENST00000460483 KRTAP1-5Q9BYS1 174 aa7.39□□□□□ -1.23
SMNDC1-203ENST00000460483 PLECQ15149 4684 aaKnown RBP7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms