RNA–Protein interactions for RNA: ENST00000459904.1

LMNA-209, Transcript of lamin A/C, humanhuman

TSL 2

Gene LMNA, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-209ENST00000459904 A0A1B0GW15 77 aa9.54□□□□□ -0.88
LMNA-209ENST00000459904 CIRBPQ14011 172 aaKnown RBP9.54□□□□□ -0.88
LMNA-209ENST00000459904 GATD1Q8NB37 220 aa9.54□□□□□ -0.88
LMNA-209ENST00000459904 TRGC1P0CF51 173 aa9.53□□□□□ -0.88
LMNA-209ENST00000459904 HBBP68871 147 aa9.53□□□□□ -0.88
LMNA-209ENST00000459904 RASL11AQ6T310 242 aa9.53□□□□□ -0.88
LMNA-209ENST00000459904 TMEM191AQ9H0A3 160 aa9.53□□□□□ -0.88
LMNA-209ENST00000459904 SUMO4Q6EEV6 95 aa9.52□□□□□ -0.89
LMNA-209ENST00000459904 TMEM136Q6ZRR5 245 aa9.52□□□□□ -0.89
LMNA-209ENST00000459904 RNF185Q96GF1 192 aa9.52□□□□□ -0.89
LMNA-209ENST00000459904 IGHV3-64A0A075B6Q5 118 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 IGHV1-24A0A0C4DH33 117 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 IGKV3OR2-268A0A0C4DH90 116 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 S100A8P05109 93 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 RAB4AP20338 218 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 CNBPP62633 177 aaKnown RBP9.51□□□□□ -0.89
LMNA-209ENST00000459904 IQCJQ1A5X6 159 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 HIGD2BQ4VC39 106 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 FAM104BQ5XKR9 115 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 SPACA4Q8TDM5 124 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 AP1S3Q96PC3 154 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 GNB1LQ9BYB4 327 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 DPH3P1Q9H4G8 78 aa9.51□□□□□ -0.89
LMNA-209ENST00000459904 SMIM17P0DL12 118 aa9.5□□□□□ -0.89
LMNA-209ENST00000459904 SMIM15Q7Z3B0 74 aa9.5□□□□□ -0.89
LMNA-209ENST00000459904 AMN1Q8IY45 258 aa9.5□□□□□ -0.89
LMNA-209ENST00000459904 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.5□□□□□ -0.89
LMNA-209ENST00000459904 IGKV2-24A0A0C4DH68 120 aa9.49□□□□□ -0.89
LMNA-209ENST00000459904 M0QY20 66 aa9.49□□□□□ -0.89
LMNA-209ENST00000459904 PKIAP61925 76 aa9.49□□□□□ -0.89
LMNA-209ENST00000459904 COX6A2Q02221 97 aa9.49□□□□□ -0.89
LMNA-209ENST00000459904 COX19Q49B96 90 aa9.49□□□□□ -0.89
LMNA-209ENST00000459904 C15orf56Q8N910 161 aa9.49□□□□□ -0.89
LMNA-209ENST00000459904 PRSS3P2Q8NHM4 247 aa9.49□□□□□ -0.89
LMNA-209ENST00000459904 GAGE12HA6NDE8 117 aa9.48□□□□□ -0.89
LMNA-209ENST00000459904 MRPL51Q4U2R6 128 aaKnown RBP9.48□□□□□ -0.89
LMNA-209ENST00000459904 TMEM97Q5BJF2 176 aa9.48□□□□□ -0.89
LMNA-209ENST00000459904 TMEM243Q9BU79 118 aa9.48□□□□□ -0.89
LMNA-209ENST00000459904 AP5S1Q9NUS5 200 aa9.48□□□□□ -0.89
LMNA-209ENST00000459904 GAS8-AS1O95177 125 aa9.47□□□□□ -0.89
LMNA-209ENST00000459904 RAB5AP20339 215 aa9.47□□□□□ -0.89
LMNA-209ENST00000459904 MAJINQ3KP22 176 aa9.47□□□□□ -0.89
LMNA-209ENST00000459904 PLAC8Q9NZF1 115 aa9.47□□□□□ -0.89
LMNA-209ENST00000459904 TRAPPC1Q9Y5R8 145 aa9.47□□□□□ -0.89
LMNA-209ENST00000459904 TRAV26-2A0A0B4J265 109 aa9.46□□□□□ -0.9
LMNA-209ENST00000459904 MRPL18Q9H0U6 180 aaKnown RBP9.46□□□□□ -0.9
LMNA-209ENST00000459904 APCSP02743 223 aa9.45□□□□□ -0.9
LMNA-209ENST00000459904 RPS10P46783 165 aaKnown RBP9.45□□□□□ -0.9
LMNA-209ENST00000459904 FABP9Q0Z7S8 132 aa9.45□□□□□ -0.9
LMNA-209ENST00000459904 KIAA1644Q3SXP7 199 aa9.45□□□□□ -0.9
LMNA-209ENST00000459904 LINC00526Q96FQ7 95 aa9.45□□□□□ -0.9
LMNA-209ENST00000459904 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.44□□□□□ -0.9
LMNA-209ENST00000459904 TRAV8-4A0A0B4J246 113 aa9.44□□□□□ -0.9
LMNA-209ENST00000459904 SMKR1H3BMG3 65 aa9.44□□□□□ -0.9
LMNA-209ENST00000459904 MT-ND6P03923 174 aa9.44□□□□□ -0.9
LMNA-209ENST00000459904 PRR3P79522 188 aaKnown RBP9.44□□□□□ -0.9
LMNA-209ENST00000459904 LPAP08519 4548 aa9.43□□□□□ -0.9
LMNA-209ENST00000459904 CKS2P33552 79 aa9.43□□□□□ -0.9
LMNA-209ENST00000459904 AMTP48728 403 aa9.43□□□□□ -0.9
LMNA-209ENST00000459904 STPG4Q8N801 248 aa9.43□□□□□ -0.9
LMNA-209ENST00000459904 C7orf33Q8WU49 177 aa9.43□□□□□ -0.9
LMNA-209ENST00000459904 MRAP2Q96G30 205 aa9.43□□□□□ -0.9
LMNA-209ENST00000459904 LINC01600Q96MT4 127 aa9.43□□□□□ -0.9
LMNA-209ENST00000459904 A0A096LNI7 61 aa9.42□□□□□ -0.9
LMNA-209ENST00000459904 A0A1B0GUV1 79 aa9.42□□□□□ -0.9
LMNA-209ENST00000459904 D6R8Y8 96 aa9.42□□□□□ -0.9
LMNA-209ENST00000459904 UBE2L6O14933 153 aa9.42□□□□□ -0.9
LMNA-209ENST00000459904 NCR2O95944 276 aa9.42□□□□□ -0.9
LMNA-209ENST00000459904 TRGC2P03986 189 aa9.42□□□□□ -0.9
LMNA-209ENST00000459904 NRACQ8N912 160 aa9.42□□□□□ -0.9
LMNA-209ENST00000459904 RPL39LQ96EH5 51 aaKnown RBP9.42□□□□□ -0.9
LMNA-209ENST00000459904 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.41□□□□□ -0.9
LMNA-209ENST00000459904 IGKV2-29A2NJV5 120 aaPredicted RBP9.41□□□□□ -0.9
LMNA-209ENST00000459904 PPBPP02775 128 aa9.41□□□□□ -0.9
LMNA-209ENST00000459904 ALKBH7Q9BT30 221 aaPredicted RBP9.41□□□□□ -0.9
LMNA-209ENST00000459904 NIT2Q9NQR4 276 aa9.41□□□□□ -0.9
LMNA-209ENST00000459904 H7C1H1 209 aa9.4□□□□□ -0.9
LMNA-209ENST00000459904 ORMDL3Q8N138 153 aa9.4□□□□□ -0.9
LMNA-209ENST00000459904 CHCHD10Q8WYQ3 142 aaPredicted RBP9.4□□□□□ -0.9
LMNA-209ENST00000459904 PRELID3AQ96N28 172 aa9.4□□□□□ -0.9
LMNA-209ENST00000459904 TRBV6-5A0A0K0K1A5 114 aa9.39□□□□□ -0.91
LMNA-209ENST00000459904 TNFRSF6BO95407 300 aa9.39□□□□□ -0.91
LMNA-209ENST00000459904 NPYP01303 97 aa9.39□□□□□ -0.91
LMNA-209ENST00000459904 COTL1Q14019 142 aa9.39□□□□□ -0.91
LMNA-209ENST00000459904 PRSS47A8MTI9 375 aa9.38□□□□□ -0.91
LMNA-209ENST00000459904 POLR2KP53803 58 aaKnown RBP9.38□□□□□ -0.91
LMNA-209ENST00000459904 KRTAP10-8P60410 259 aa9.38□□□□□ -0.91
LMNA-209ENST00000459904 A0A0J9YXV3 536 aa9.37□□□□□ -0.91
LMNA-209ENST00000459904 PPP1R17O96001 155 aa9.37□□□□□ -0.91
LMNA-209ENST00000459904 RNASEKQ6P5S7 137 aaKnown RBP9.37□□□□□ -0.91
LMNA-209ENST00000459904 ST20Q9HBF5 79 aa9.37□□□□□ -0.91
LMNA-209ENST00000459904 FOXI1Q12951 378 aa9.36□□□□□ -0.91
LMNA-209ENST00000459904 CFAP161Q6P656 301 aa9.36□□□□□ -0.91
LMNA-209ENST00000459904 C20orf78Q9BR46 151 aa9.36□□□□□ -0.91
LMNA-209ENST00000459904 LAMTOR2Q9Y2Q5 125 aa9.36□□□□□ -0.91
LMNA-209ENST00000459904 SDHAF1A6NFY7 115 aa9.35□□□□□ -0.91
LMNA-209ENST00000459904 XCL1P47992 114 aa9.35□□□□□ -0.91
LMNA-209ENST00000459904 SUMO2P61956 95 aaKnown RBP9.35□□□□□ -0.91
LMNA-209ENST00000459904 AMMECR1LQ6DCA0 310 aa9.35□□□□□ -0.91
LMNA-209ENST00000459904 GVQW2A0A096LPI5 108 aaPredicted RBP9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms