RNA–Protein interactions for RNA: ENST00000459711.5

CHRD-207, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 503 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-207ENST00000459711 KRTAP1-4P0C5Y4 121 aa11.97□□□□□ -0.49
CHRD-207ENST00000459711 RPL18AQ02543 176 aaKnown RBP11.97□□□□□ -0.49
CHRD-207ENST00000459711 CAMK2N2Q96S95 79 aa11.97□□□□□ -0.49
CHRD-207ENST00000459711 H2AFB1P0C5Y9 115 aa11.96□□□□□ -0.49
CHRD-207ENST00000459711 ESDP10768 282 aa11.96□□□□□ -0.49
CHRD-207ENST00000459711 CDC42SE2Q9NRR3 84 aa11.96□□□□□ -0.49
CHRD-207ENST00000459711 I3L3M4 83 aa11.95□□□□□ -0.5
CHRD-207ENST00000459711 MALP21145 153 aa11.95□□□□□ -0.5
CHRD-207ENST00000459711 CCL20P78556 96 aa11.95□□□□□ -0.5
CHRD-207ENST00000459711 RAB19A4D1S5 217 aa11.94□□□□□ -0.5
CHRD-207ENST00000459711 PMCHP20382 165 aa11.94□□□□□ -0.5
CHRD-207ENST00000459711 GNG4P50150 75 aa11.94□□□□□ -0.5
CHRD-207ENST00000459711 TEX261Q6UWH6 196 aa11.94□□□□□ -0.5
CHRD-207ENST00000459711 MRPL52Q86TS9 123 aaKnown RBP11.94□□□□□ -0.5
CHRD-207ENST00000459711 C2orf48Q96LS8 159 aa11.94□□□□□ -0.5
CHRD-207ENST00000459711 MANBALQ9NQG1 85 aa11.94□□□□□ -0.5
CHRD-207ENST00000459711 BCL2L11O43521 198 aa11.93□□□□□ -0.5
CHRD-207ENST00000459711 KRTAP11-1Q8IUC1 163 aa11.93□□□□□ -0.5
CHRD-207ENST00000459711 MRAP2Q96G30 205 aa11.93□□□□□ -0.5
CHRD-207ENST00000459711 A0A087WZ39 114 aa11.92□□□□□ -0.5
CHRD-207ENST00000459711 COX7A2LO14548 114 aa11.92□□□□□ -0.5
CHRD-207ENST00000459711 TSKUQ8WUA8 353 aa11.92□□□□□ -0.5
CHRD-207ENST00000459711 GNG13Q9P2W3 67 aa11.92□□□□□ -0.5
CHRD-207ENST00000459711 TRBV20OR9-2A0A075B6H5 130 aa11.91□□□□□ -0.5
CHRD-207ENST00000459711 TRAV1-1A0A0B4J248 108 aa11.91□□□□□ -0.5
CHRD-207ENST00000459711 TRBV6-5A0A0K0K1A5 114 aa11.91□□□□□ -0.5
CHRD-207ENST00000459711 TSHBP01222 138 aa11.91□□□□□ -0.5
CHRD-207ENST00000459711 RPL13AP40429 203 aaKnown RBP11.91□□□□□ -0.5
CHRD-207ENST00000459711 UBE2D1P51668 147 aa11.91□□□□□ -0.5
CHRD-207ENST00000459711 FOXA3P55318 350 aaPredicted RBP11.91□□□□□ -0.5
CHRD-207ENST00000459711 NUDT10Q8NFP7 164 aa11.91□□□□□ -0.5
CHRD-207ENST00000459711 NUDT11Q96G61 164 aa11.91□□□□□ -0.5
CHRD-207ENST00000459711 OPRPNQ99935 248 aaPredicted RBP11.91□□□□□ -0.5
CHRD-207ENST00000459711 BIN3Q9NQY0 253 aa11.91□□□□□ -0.5
CHRD-207ENST00000459711 TMEM242Q9NWH2 141 aa11.91□□□□□ -0.5
CHRD-207ENST00000459711 C1orf196B1AJZ1 125 aa11.9□□□□□ -0.5
CHRD-207ENST00000459711 RNF151Q2KHN1 245 aa11.9□□□□□ -0.5
CHRD-207ENST00000459711 SMIM15Q7Z3B0 74 aa11.9□□□□□ -0.5
CHRD-207ENST00000459711 FAM210AQ96ND0 272 aa11.89□□□□□ -0.51
CHRD-207ENST00000459711 RPP21Q9H633 154 aaKnown RBP11.87□□□□□ -0.51
CHRD-207ENST00000459711 FAM168BA1KXE4 195 aa11.86□□□□□ -0.51
CHRD-207ENST00000459711 C7orf77A4D0Y5 90 aa11.86□□□□□ -0.51
CHRD-207ENST00000459711 SPAG11BQ08648 103 aa11.86□□□□□ -0.51
CHRD-207ENST00000459711 ZNF345Q14585 488 aa11.86□□□□□ -0.51
CHRD-207ENST00000459711 C5orf38Q86SI9 138 aa11.85□□□□□ -0.51
CHRD-207ENST00000459711 RNASE7Q9H1E1 156 aaKnown RBP11.85□□□□□ -0.51
CHRD-207ENST00000459711 ST20Q9HBF5 79 aa11.85□□□□□ -0.51
CHRD-207ENST00000459711 MRPL35Q9NZE8 188 aaKnown RBP11.85□□□□□ -0.51
CHRD-207ENST00000459711 PDE6DO43924 150 aa11.84□□□□□ -0.51
CHRD-207ENST00000459711 MED9Q9NWA0 146 aa11.84□□□□□ -0.51
CHRD-207ENST00000459711 CARHSP1Q9Y2V2 147 aaKnown RBP11.84□□□□□ -0.51
CHRD-207ENST00000459711 TRBV27A0A0K0K1C4 114 aa11.83□□□□□ -0.52
CHRD-207ENST00000459711 POLR2KP53803 58 aaKnown RBP11.83□□□□□ -0.52
CHRD-207ENST00000459711 FAM19A5Q7Z5A7 132 aaPredicted RBP11.83□□□□□ -0.52
CHRD-207ENST00000459711 IMMP2LQ96T52 175 aa11.83□□□□□ -0.52
CHRD-207ENST00000459711 MUC17Q685J3 4493 aa11.83□□□□□ -0.52
CHRD-207ENST00000459711 SMLR1H3BR10 107 aa11.82□□□□□ -0.52
CHRD-207ENST00000459711 OR10D4PQ8NGN7 298 aa11.82□□□□□ -0.52
CHRD-207ENST00000459711 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
CHRD-207ENST00000459711 TRAV13-1A0A0B4J241 112 aa11.81□□□□□ -0.52
CHRD-207ENST00000459711 RNASE13Q5GAN3 156 aaKnown RBP11.81□□□□□ -0.52
CHRD-207ENST00000459711 K7EN84 100 aa11.8□□□□□ -0.52
CHRD-207ENST00000459711 TSPAN13O95857 204 aa11.8□□□□□ -0.52
CHRD-207ENST00000459711 TLX1NBP0CAT3 122 aa11.8□□□□□ -0.52
CHRD-207ENST00000459711 KRTAP7-1Q8IUC3 87 aa11.8□□□□□ -0.52
CHRD-207ENST00000459711 UBE2D4Q9Y2X8 147 aa11.8□□□□□ -0.52
CHRD-207ENST00000459711 F8WDY8 70 aa11.79□□□□□ -0.52
CHRD-207ENST00000459711 KANTRA0A1W2PQU2 76 aa11.78□□□□□ -0.52
CHRD-207ENST00000459711 NDUFA1O15239 70 aa11.78□□□□□ -0.52
CHRD-207ENST00000459711 UBE2BP63146 152 aa11.78□□□□□ -0.52
CHRD-207ENST00000459711 SMAGPQ0VAQ4 97 aa11.78□□□□□ -0.52
CHRD-207ENST00000459711 M0QXV9 152 aa11.77□□□□□ -0.53
CHRD-207ENST00000459711 C10orf25Q5T742 122 aa11.77□□□□□ -0.53
CHRD-207ENST00000459711 ORAOV1Q8WV07 137 aa11.77□□□□□ -0.53
CHRD-207ENST00000459711 TEX46H3BTG2 121 aa11.76□□□□□ -0.53
CHRD-207ENST00000459711 Q6ZUT4 128 aa11.76□□□□□ -0.53
CHRD-207ENST00000459711 OCC1Q8TAD7 63 aa11.76□□□□□ -0.53
CHRD-207ENST00000459711 SMDT1Q9H4I9 107 aa11.76□□□□□ -0.53
CHRD-207ENST00000459711 HMSDA8MTL9 139 aa11.75□□□□□ -0.53
CHRD-207ENST00000459711 TMEM241Q24JQ0 296 aa11.75□□□□□ -0.53
CHRD-207ENST00000459711 GAGE2EQ4V326 116 aa11.75□□□□□ -0.53
CHRD-207ENST00000459711 C6orf48Q9UBA6 75 aa11.75□□□□□ -0.53
CHRD-207ENST00000459711 GAGE2DQ9UEU5 116 aa11.75□□□□□ -0.53
CHRD-207ENST00000459711 FCER1GP30273 86 aa11.74□□□□□ -0.53
CHRD-207ENST00000459711 UNQ6190/PRO20217Q6UXQ8 127 aa11.74□□□□□ -0.53
CHRD-207ENST00000459711 VCYO14598 125 aa11.73□□□□□ -0.53
CHRD-207ENST00000459711 ZNF861PO60384 105 aa11.73□□□□□ -0.53
CHRD-207ENST00000459711 TMEM191AQ9H0A3 160 aa11.73□□□□□ -0.53
CHRD-207ENST00000459711 A8MWL6 223 aa11.72□□□□□ -0.53
CHRD-207ENST00000459711 GATCO43716 136 aaKnown RBP11.72□□□□□ -0.53
CHRD-207ENST00000459711 RAB4AP20338 218 aa11.72□□□□□ -0.53
CHRD-207ENST00000459711 TIMM21Q9BVV7 248 aa11.72□□□□□ -0.53
CHRD-207ENST00000459711 IGHV3OR16-9A0A0B4J2B5 98 aa11.71□□□□□ -0.53
CHRD-207ENST00000459711 BORCS7Q96B45 105 aa11.7□□□□□ -0.54
CHRD-207ENST00000459711 A0A087X002 238 aa11.69□□□□□ -0.54
CHRD-207ENST00000459711 FAM231DQ6ZW35 169 aa11.69□□□□□ -0.54
CHRD-207ENST00000459711 AMN1Q8IY45 258 aa11.69□□□□□ -0.54
CHRD-207ENST00000459711 KIR2DL4Q99706 377 aa11.69□□□□□ -0.54
CHRD-207ENST00000459711 BATF3Q9NR55 127 aa11.69□□□□□ -0.54
CHRD-207ENST00000459711 A0A1B0GUT8 65 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms