RNA–Protein interactions for RNA: ENST00000458530.1

VPS50-207, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 4

Gene VPS50, Length 667 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-207ENST00000458530 ZMAT4Q9H898 229 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 PYGO1Q9Y3Y4 419 aa6.31□□□□□ -1.4
VPS50-207ENST00000458530 TRBV25-1A0A075B6N4 114 aa6.3□□□□□ -1.4
VPS50-207ENST00000458530 A0A087WX48 190 aa6.3□□□□□ -1.4
VPS50-207ENST00000458530 H7C423 109 aa6.3□□□□□ -1.4
VPS50-207ENST00000458530 UBE2L6O14933 153 aa6.3□□□□□ -1.4
VPS50-207ENST00000458530 DEFB4AO15263 64 aa6.3□□□□□ -1.4
VPS50-207ENST00000458530 DPM2O94777 84 aa6.3□□□□□ -1.4
VPS50-207ENST00000458530 TIMM21Q9BVV7 248 aa6.3□□□□□ -1.4
VPS50-207ENST00000458530 HERC2O95714 4834 aa6.3□□□□□ -1.4
VPS50-207ENST00000458530 TRAV26-1A0A087WT03 109 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 IGHV3-38A0A0C4DH36 116 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 IGIPA6NJ69 53 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 F8VRH5 84 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 IGKCP01834 107 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 LINC00694P0DN24 101 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 GYPEP15421 78 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 RPL39P62891 51 aaKnown RBP6.29□□□□□ -1.4
VPS50-207ENST00000458530 ODF1Q14990 250 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 PMVKQ15126 192 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 SPATA45Q537H7 98 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 DGAT2L7PQ6IED9 249 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 ATP6V0E2Q8NHE4 81 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 BAALCQ8WXS3 180 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 TM2D3Q9BRN9 247 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 C2orf88Q9BSF0 95 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 TMEM243Q9BU79 118 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 RETNQ9HD89 108 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 CELA1Q9UNI1 258 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 PAM16Q9Y3D7 125 aa6.29□□□□□ -1.4
VPS50-207ENST00000458530 CHTOPQ9Y3Y2 248 aaKnown RBP6.29□□□□□ -1.4
VPS50-207ENST00000458530 F5H768 121 aa6.28□□□□□ -1.4
VPS50-207ENST00000458530 ATOH7Q8N100 152 aa6.28□□□□□ -1.4
VPS50-207ENST00000458530 TMEM101Q96IK0 257 aa6.28□□□□□ -1.4
VPS50-207ENST00000458530 CHCHD7Q9BUK0 85 aa6.28□□□□□ -1.4
VPS50-207ENST00000458530 ICOSQ9Y6W8 199 aa6.28□□□□□ -1.4
VPS50-207ENST00000458530 H3BNG1 76 aa6.27□□□□□ -1.41
VPS50-207ENST00000458530 HTN3P15516 51 aa6.27□□□□□ -1.41
VPS50-207ENST00000458530 ZNF25P17030 456 aaPredicted RBP6.27□□□□□ -1.41
VPS50-207ENST00000458530 MRPS36P82909 103 aaKnown RBP6.27□□□□□ -1.41
VPS50-207ENST00000458530 MRPL23Q16540 153 aaKnown RBP6.27□□□□□ -1.41
VPS50-207ENST00000458530 AMMECR1LQ6DCA0 310 aa6.27□□□□□ -1.41
VPS50-207ENST00000458530 MRPL52Q86TS9 123 aaKnown RBP6.27□□□□□ -1.41
VPS50-207ENST00000458530 SBSPONQ8IVN8 264 aa6.27□□□□□ -1.41
VPS50-207ENST00000458530 ZNF664Q8N3J9 261 aa6.27□□□□□ -1.41
VPS50-207ENST00000458530 VCX2Q9H322 139 aa6.27□□□□□ -1.41
VPS50-207ENST00000458530 CSDC2Q9Y534 153 aaKnown RBP6.27□□□□□ -1.41
VPS50-207ENST00000458530 PCLOQ9Y6V0 5065 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 IGLV4-3A0A075B6K6 122 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.26□□□□□ -1.41
VPS50-207ENST00000458530 TRBV6-8A0A0A6YYG3 113 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 LOC100131303A0A0U1RQF7 123 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 IGKV2-29A2NJV5 120 aaPredicted RBP6.26□□□□□ -1.41
VPS50-207ENST00000458530 PRSS29PA6NIE9 313 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 PCP4L1A6NKN8 68 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 HERVK_113P61574 105 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 C11orf45Q8TAV5 145 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 PMCHL2Q9BQD1 86 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 CST9LQ9H4G1 147 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 MRPL35Q9NZE8 188 aaKnown RBP6.26□□□□□ -1.41
VPS50-207ENST00000458530 Q9UF83 564 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 UBE2D4Q9Y2X8 147 aa6.26□□□□□ -1.41
VPS50-207ENST00000458530 A0A0J9YWU9 116 aa6.25□□□□□ -1.41
VPS50-207ENST00000458530 FGF6P10767 208 aa6.25□□□□□ -1.41
VPS50-207ENST00000458530 SEC11AP67812 179 aa6.25□□□□□ -1.41
VPS50-207ENST00000458530 C12orf74Q32Q52 190 aa6.25□□□□□ -1.41
VPS50-207ENST00000458530 OR5A1Q8NGJ0 315 aa6.25□□□□□ -1.41
VPS50-207ENST00000458530 DEFB104AQ8WTQ1 72 aa6.25□□□□□ -1.41
VPS50-207ENST00000458530 PRO1933Q9H354 126 aa6.25□□□□□ -1.41
VPS50-207ENST00000458530 UQCR10Q9UDW1 63 aa6.25□□□□□ -1.41
VPS50-207ENST00000458530 FRAS1Q86XX4 4008 aa6.25□□□□□ -1.41
VPS50-207ENST00000458530 A0A0J9YY99 117 aa6.24□□□□□ -1.41
VPS50-207ENST00000458530 hDV102S1A0JD36 115 aa6.24□□□□□ -1.41
VPS50-207ENST00000458530 DDTP30046 118 aa6.24□□□□□ -1.41
VPS50-207ENST00000458530 AMELXQ99217 191 aa6.24□□□□□ -1.41
VPS50-207ENST00000458530 MIEN1Q9BRT3 115 aa6.24□□□□□ -1.41
VPS50-207ENST00000458530 CHCHD5Q9BSY4 110 aa6.24□□□□□ -1.41
VPS50-207ENST00000458530 TRAV10A0A0B4J240 114 aa6.23□□□□□ -1.41
VPS50-207ENST00000458530 IGLC3P0DOY3 106 aa6.23□□□□□ -1.41
VPS50-207ENST00000458530 TIRAPP58753 221 aa6.23□□□□□ -1.41
VPS50-207ENST00000458530 ZC2HC1BQ5TFG8 222 aa6.23□□□□□ -1.41
VPS50-207ENST00000458530 SLC25A34Q6PIV7 304 aa6.23□□□□□ -1.41
VPS50-207ENST00000458530 NTM-AS1Q6ZSK4 140 aa6.23□□□□□ -1.41
VPS50-207ENST00000458530 NFE4Q86UQ8 179 aa6.23□□□□□ -1.41
VPS50-207ENST00000458530 VSIG2Q96IQ7 327 aa6.23□□□□□ -1.41
VPS50-207ENST00000458530 CHAC1Q9BUX1 264 aa6.23□□□□□ -1.41
VPS50-207ENST00000458530 DEFB131BA0A096LNP1 70 aa6.22□□□□□ -1.41
VPS50-207ENST00000458530 C11orf86A6NJI1 115 aa6.22□□□□□ -1.41
VPS50-207ENST00000458530 Q6ZTC4 211 aa6.22□□□□□ -1.41
VPS50-207ENST00000458530 Q6ZUT4 128 aa6.22□□□□□ -1.41
VPS50-207ENST00000458530 TINCRA0A1B0GVN0 87 aa6.21□□□□□ -1.42
VPS50-207ENST00000458530 H3BRM9 83 aa6.21□□□□□ -1.42
VPS50-207ENST00000458530 COX8AP10176 69 aa6.21□□□□□ -1.42
VPS50-207ENST00000458530 HNRNPA3P51991 378 aaKnown RBP6.21□□□□□ -1.42
VPS50-207ENST00000458530 GAGE6Q13070 117 aa6.21□□□□□ -1.42
VPS50-207ENST00000458530 MAJINQ3KP22 176 aa6.21□□□□□ -1.42
VPS50-207ENST00000458530 TMEM170BQ5T4T1 132 aa6.21□□□□□ -1.42
VPS50-207ENST00000458530 LELP1Q5T871 98 aa6.21□□□□□ -1.42
VPS50-207ENST00000458530 ZFAND6Q6FIF0 208 aa6.21□□□□□ -1.42
VPS50-207ENST00000458530 C15orf53Q8NAA6 179 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms