RNA–Protein interactions for RNA: ENST00000458304.2

SPARCL1-204, Transcript of SPARC like 1, humanhuman

TSL 4

Gene SPARCL1, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARCL1-204ENST00000458304 PYGO2Q9BRQ0 406 aa3.33□□□□□ -1.88
SPARCL1-204ENST00000458304 NIT2Q9NQR4 276 aa3.33□□□□□ -1.88
SPARCL1-204ENST00000458304 PHLDA3Q9Y5J5 127 aa3.33□□□□□ -1.88
SPARCL1-204ENST00000458304 V9GYV3 84 aa3.33□□□□□ -1.88
SPARCL1-204ENST00000458304 PTPN13Q12923 2485 aa3.33□□□□□ -1.88
SPARCL1-204ENST00000458304 CSPG4Q6UVK1 2322 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 IGKV2-40A0A087WW87 121 aaPredicted RBP3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 LINC01549A6NIU2 74 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 J3QQQ9 107 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 M0R3E3 92 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 SH2D1AO60880 128 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 IGKV2D-40P01614 121 aaPredicted RBP3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST1H2BOP23527 126 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST1H2BBP33778 126 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 NDUFA6P56556 154 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST1H2BDP58876 126 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST1H2BCP62807 126 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST2H2BEQ16778 126 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 LUZP6Q538Z0 58 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 Q5XG85 94 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 MRPL54Q6P161 138 aaKnown RBP3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 TMEM158Q8WZ71 300 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST1H2BHQ93079 126 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 LINC00479Q96M42 142 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST1H2BNQ99877 126 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST1H2BMQ99879 126 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 CENPEQ02224 2701 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 APCP25054 2843 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 CELSR2Q9HCU4 2923 aa3.32□□□□□ -1.88
SPARCL1-204ENST00000458304 ABCA12Q86UK0 2595 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 A0A1B0GVX0 72 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 C7orf71A4D174 169 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 C19orf71A6NCJ1 209 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 TAX1BP3O14907 124 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 ZNF73O43830 326 aaPredicted RBP3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 CD28P10747 220 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 RNASE4P34096 147 aaKnown RBP3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 RPL36AP83881 106 aaKnown RBP3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 AMMECR1LQ6DCA0 310 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 RNF182Q8N6D2 247 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 C3orf56Q8N813 242 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 C16orf74Q96GX8 76 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 ZC2HC1AQ96GY0 325 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 B9D2Q9BPU9 175 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 TP73-AS1Q9UF72 201 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 SMAD5-AS1Q9Y6J3 95 aa3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 HELZ2Q9BYK8 2649 aaKnown RBP3.31□□□□□ -1.88
SPARCL1-204ENST00000458304 A0A0J9YX75 114 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 ZNF705FA8MVS1 300 aaPredicted RBP3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 SPINK4O60575 86 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 CFC1BP0CG36 223 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 HLA-DRB4P13762 266 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 CKS2P33552 79 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 ZNF80P51504 273 aaPredicted RBP3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 FOXA3P55318 350 aaPredicted RBP3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 DEFB136Q30KP8 78 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 DEFB114Q30KQ6 69 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 CEND1Q8N111 149 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 DCANP1Q8TF63 244 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 VGLL1Q99990 258 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 AGPAT4-IT1Q9H0P7 198 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 KLK5Q9Y337 293 aaPredicted RBP3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 HLA-DRB4X5D2U9 266 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 TENM4Q6N022 2769 aa3.3□□□□□ -1.88
SPARCL1-204ENST00000458304 TMSB15BA0A087X1C1 80 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 K7EMI3 77 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 K7ERS5 55 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 M0R378 163 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 ZNF324O75467 553 aaPredicted RBP3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 PRM2P04554 102 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 LINC00694P0DN24 101 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 DEFB131AP59861 70 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 LYZL1Q6UWQ5 148 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 PCP2Q8IVA1 136 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 DAND5Q8N907 189 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 C15orf56Q8N910 161 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 Q8TAT8 98 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 CHCHD1Q96BP2 118 aaKnown RBP3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 TMEM191AQ9H0A3 160 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 CST9LQ9H4G1 147 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 DPH3P1Q9H4G8 78 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 NXT2Q9NPJ8 142 aaKnown RBP3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 TIMM8BQ9Y5J9 83 aaPredicted RBP3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 ITPR3Q14573 2671 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 CCDC168Q8NDH2 2452 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 TEX15Q9BXT5 2789 aa3.29□□□□□ -1.88
SPARCL1-204ENST00000458304 GCN1Q92616 2671 aaKnown RBP3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 FLNAP21333 2647 aaKnown RBP3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 POLQO75417 2590 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 TRBV7-6A0A0J9YX20 115 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 LOC107984640A0A0U1RRK4 108 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 PHOX2AO14813 284 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST1H2BKO60814 126 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 HIST1H2BJP06899 126 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 IGLC6P0CF74 106 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 HLA-DMBP28068 263 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 Q0VG73 95 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 IQCJQ1A5X6 159 aa3.28□□□□□ -1.88
SPARCL1-204ENST00000458304 C10orf99Q6UWK7 81 aa3.28□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms