RNA–Protein interactions for RNA: ENST00000457753.5

UBA1-208, Transcript of ubiquitin like modifier activating enzyme 1, human

TSL 5

Gene UBA1, Length 809 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBA1-208	ENST00000457753	GAGE6	Q13070	117 aa		11.15	□□□□□ -0.62
UBA1-208	ENST00000457753	ORMDL3	Q8N138	153 aa		11.15	□□□□□ -0.62
UBA1-208	ENST00000457753	C20orf78	Q9BR46	151 aa		11.15	□□□□□ -0.62
UBA1-208	ENST00000457753	PRR34	Q9NV39	138 aa		11.15	□□□□□ -0.62
UBA1-208	ENST00000457753	PHOX2A	O14813	284 aa		11.14	□□□□□ -0.63
UBA1-208	ENST00000457753	COX19	Q49B96	90 aa		11.14	□□□□□ -0.63
UBA1-208	ENST00000457753	GNB1L	Q9BYB4	327 aa		11.14	□□□□□ -0.63
UBA1-208	ENST00000457753	VCY	O14598	125 aa		11.13	□□□□□ -0.63
UBA1-208	ENST00000457753	NPY	P01303	97 aa		11.13	□□□□□ -0.63
UBA1-208	ENST00000457753	HLA-DQA1	P01909	254 aa		11.13	□□□□□ -0.63
UBA1-208	ENST00000457753	AMT	P48728	403 aa		11.13	□□□□□ -0.63
UBA1-208	ENST00000457753	C14orf177	Q52M58	125 aa		11.13	□□□□□ -0.63
UBA1-208	ENST00000457753	PRELID3A	Q96N28	172 aa		11.13	□□□□□ -0.63
UBA1-208	ENST00000457753	TMEM243	Q9BU79	118 aa		11.13	□□□□□ -0.63
UBA1-208	ENST00000457753	LRP1	Q07954	4544 aa	Known RBP	11.13	□□□□□ -0.63
UBA1-208	ENST00000457753	TGIF2-C20orf24	A0A0A6YYL0	155 aa		11.12	□□□□□ -0.63
UBA1-208	ENST00000457753	TSHB	P01222	138 aa		11.12	□□□□□ -0.63
UBA1-208	ENST00000457753	APCS	P02743	223 aa		11.12	□□□□□ -0.63
UBA1-208	ENST00000457753	RPL32	P62910	135 aa	Known RBP	11.12	□□□□□ -0.63
UBA1-208	ENST00000457753	LAMTOR2	Q9Y2Q5	125 aa		11.12	□□□□□ -0.63
UBA1-208	ENST00000457753		A0A1B0GUV1	79 aa		11.11	□□□□□ -0.63
UBA1-208	ENST00000457753	LINC00269	Q8N2A0	174 aa		11.11	□□□□□ -0.63
UBA1-208	ENST00000457753	MT-ND6	P03923	174 aa		11.1	□□□□□ -0.63
UBA1-208	ENST00000457753	KRTAP10-4	P60372	401 aa	Predicted RBP	11.1	□□□□□ -0.63
UBA1-208	ENST00000457753	YPEL4	Q96NS1	127 aa		11.1	□□□□□ -0.63
UBA1-208	ENST00000457753	SMIM2	Q9BVW6	85 aa		11.1	□□□□□ -0.63
UBA1-208	ENST00000457753	UBE2L6	O14933	153 aa		11.09	□□□□□ -0.63
UBA1-208	ENST00000457753	OXT	P01178	125 aa		11.09	□□□□□ -0.63
UBA1-208	ENST00000457753	REG3A	Q06141	175 aa		11.09	□□□□□ -0.63
UBA1-208	ENST00000457753	KIAA1644	Q3SXP7	199 aa		11.09	□□□□□ -0.63
UBA1-208	ENST00000457753	CLPSL2	Q6UWE3	100 aa		11.09	□□□□□ -0.63
UBA1-208	ENST00000457753	C20orf203	Q8NBC4	194 aa		11.09	□□□□□ -0.63
UBA1-208	ENST00000457753	KIR2DL4	Q99706	377 aa		11.09	□□□□□ -0.63
UBA1-208	ENST00000457753	SMCO4	Q9NRQ5	59 aa		11.09	□□□□□ -0.63
UBA1-208	ENST00000457753	PLA2G2D	Q9UNK4	145 aa		11.09	□□□□□ -0.63
UBA1-208	ENST00000457753	UBR4	Q5T4S7	5183 aa		11.08	□□□□□ -0.64
UBA1-208	ENST00000457753	HMCN2	Q8NDA2	5059 aa		11.08	□□□□□ -0.64
UBA1-208	ENST00000457753	PRSS47	A8MTI9	375 aa		11.08	□□□□□ -0.64
UBA1-208	ENST00000457753		H7C423	109 aa		11.08	□□□□□ -0.64
UBA1-208	ENST00000457753	ESD	P10768	282 aa		11.08	□□□□□ -0.64
UBA1-208	ENST00000457753	FCER1G	P30273	86 aa		11.08	□□□□□ -0.64
UBA1-208	ENST00000457753	RPL37A	P61513	92 aa	Known RBP	11.08	□□□□□ -0.64
UBA1-208	ENST00000457753	KRTAP26-1	Q6PEX3	210 aa		11.08	□□□□□ -0.64
UBA1-208	ENST00000457753	MRPL18	Q9H0U6	180 aa	Known RBP	11.08	□□□□□ -0.64
UBA1-208	ENST00000457753	IGKV2D-29	A0A075B6S2	120 aa	Predicted RBP	11.07	□□□□□ -0.64
UBA1-208	ENST00000457753	TRAV8-4	A0A0B4J246	113 aa		11.07	□□□□□ -0.64
UBA1-208	ENST00000457753	IGKV2-29	A2NJV5	120 aa	Predicted RBP	11.07	□□□□□ -0.64
UBA1-208	ENST00000457753	USP17L23	D6RBM5	183 aa		11.07	□□□□□ -0.64
UBA1-208	ENST00000457753	CBLN2	Q8IUK8	224 aa		11.07	□□□□□ -0.64
UBA1-208	ENST00000457753	MAP1LC3A	Q9H492	121 aa		11.07	□□□□□ -0.64
UBA1-208	ENST00000457753	IGLV4-60	A0A075B6I1	120 aa		11.06	□□□□□ -0.64
UBA1-208	ENST00000457753	TCAP	O15273	167 aa		11.06	□□□□□ -0.64
UBA1-208	ENST00000457753	LOC389332	A0A1B0GUA5	103 aa		11.05	□□□□□ -0.64
UBA1-208	ENST00000457753	FABP9	Q0Z7S8	132 aa		11.05	□□□□□ -0.64
UBA1-208	ENST00000457753	TRAPPC1	Q9Y5R8	145 aa		11.05	□□□□□ -0.64
UBA1-208	ENST00000457753	FAT3	Q8TDW7	4589 aa		11.05	□□□□□ -0.64
UBA1-208	ENST00000457753	FGF6	P10767	208 aa		11.04	□□□□□ -0.64
UBA1-208	ENST00000457753	AMMECR1L	Q6DCA0	310 aa		11.04	□□□□□ -0.64
UBA1-208	ENST00000457753	ALKBH7	Q9BT30	221 aa	Predicted RBP	11.04	□□□□□ -0.64
UBA1-208	ENST00000457753	IGLV10-54	A0A075B6I4	117 aa		11.03	□□□□□ -0.64
UBA1-208	ENST00000457753	RNASEK	Q6P5S7	137 aa	Known RBP	11.03	□□□□□ -0.64
UBA1-208	ENST00000457753		Q8N8P6	123 aa		11.03	□□□□□ -0.64
UBA1-208	ENST00000457753	PRSS1	P07477	247 aa		11.02	□□□□□ -0.65
UBA1-208	ENST00000457753	ZNF25	P17030	456 aa	Predicted RBP	11.02	□□□□□ -0.65
UBA1-208	ENST00000457753	RAB5A	P20339	215 aa		11.02	□□□□□ -0.65
UBA1-208	ENST00000457753	DGAT2L7P	Q6IED9	249 aa		11.02	□□□□□ -0.65
UBA1-208	ENST00000457753	MRPL52	Q86TS9	123 aa	Known RBP	11.01	□□□□□ -0.65
UBA1-208	ENST00000457753	TMEM18	Q96B42	140 aa		11.01	□□□□□ -0.65
UBA1-208	ENST00000457753	NXT2	Q9NPJ8	142 aa	Known RBP	11.01	□□□□□ -0.65
UBA1-208	ENST00000457753	IFI27	P40305	119 aa	Predicted RBP	11	□□□□□ -0.65
UBA1-208	ENST00000457753	HNRNPA3	P51991	378 aa	Known RBP	11	□□□□□ -0.65
UBA1-208	ENST00000457753	TMEM101	Q96IK0	257 aa		11	□□□□□ -0.65
UBA1-208	ENST00000457753		K7EMI3	77 aa		10.99	□□□□□ -0.65
UBA1-208	ENST00000457753	SMAGP	Q0VAQ4	97 aa		10.99	□□□□□ -0.65
UBA1-208	ENST00000457753	C9orf163	Q8N9P6	203 aa		10.99	□□□□□ -0.65
UBA1-208	ENST00000457753	UBE2D4	Q9Y2X8	147 aa		10.99	□□□□□ -0.65
UBA1-208	ENST00000457753	OR5A1	Q8NGJ0	315 aa		10.98	□□□□□ -0.65
UBA1-208	ENST00000457753	DPH3	Q96FX2	82 aa		10.98	□□□□□ -0.65
UBA1-208	ENST00000457753	TIMM21	Q9BVV7	248 aa		10.98	□□□□□ -0.65
UBA1-208	ENST00000457753	CSDC2	Q9Y534	153 aa	Known RBP	10.98	□□□□□ -0.65
UBA1-208	ENST00000457753	AFDN-AS1	Q9Y6Z5	254 aa	Predicted RBP	10.98	□□□□□ -0.65
UBA1-208	ENST00000457753	RPL39	P62891	51 aa	Known RBP	10.97	□□□□□ -0.65
UBA1-208	ENST00000457753	ORMDL2	Q53FV1	153 aa		10.97	□□□□□ -0.65
UBA1-208	ENST00000457753	PRSS3P2	Q8NHM4	247 aa		10.97	□□□□□ -0.65
UBA1-208	ENST00000457753	CDC42SE2	Q9NRR3	84 aa		10.97	□□□□□ -0.65
UBA1-208	ENST00000457753	COLCA2	A8K830	154 aa		10.96	□□□□□ -0.65
UBA1-208	ENST00000457753	PANO1	I0J062	215 aa		10.96	□□□□□ -0.65
UBA1-208	ENST00000457753	SCO1	O75880	301 aa		10.96	□□□□□ -0.65
UBA1-208	ENST00000457753	CNBP	P62633	177 aa	Known RBP	10.96	□□□□□ -0.65
UBA1-208	ENST00000457753	PKHD1L1	Q86WI1	4243 aa		10.95	□□□□□ -0.66
UBA1-208	ENST00000457753	ZNF664	Q8N3J9	261 aa		10.95	□□□□□ -0.66
UBA1-208	ENST00000457753	C18orf32	Q8TCD1	76 aa		10.95	□□□□□ -0.66
UBA1-208	ENST00000457753	IGKV3OR2-268	A0A0C4DH90	116 aa		10.94	□□□□□ -0.66
UBA1-208	ENST00000457753	hDV102S1	A0JD36	115 aa		10.94	□□□□□ -0.66
UBA1-208	ENST00000457753	GAGE12H	A6NDE8	117 aa		10.94	□□□□□ -0.66
UBA1-208	ENST00000457753	LINC01546	A6NGU7	62 aa		10.94	□□□□□ -0.66
UBA1-208	ENST00000457753	SPANXA1	Q9NS26	97 aa		10.94	□□□□□ -0.66
UBA1-208	ENST00000457753	S100A1	P23297	94 aa		10.93	□□□□□ -0.66
UBA1-208	ENST00000457753	C2orf66	Q6UXQ4	117 aa		10.93	□□□□□ -0.66
UBA1-208	ENST00000457753	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	10.93	□□□□□ -0.66

Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms