RNA–Protein interactions for RNA: ENST00000455554.2

LINC02540-201, Transcript of long intergenic non-protein coding RNA 2540, humanhuman

TSL 3 BASIC

Gene LINC02540, Length 570 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02540-201ENST00000455554 IGHV6-1A0A0B4J1U7 121 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 TRBV10-3A0A0K0K1G6 114 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 F8VRH5 84 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 H7C2G1 150 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 NDUFA3O95167 84 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 ARMS2P0C7Q2 107 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 CCL4P13236 92 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 MIFP14174 115 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 RNASE4P34096 147 aaKnown RBP1.3□□□□□ -2.2
LINC02540-201ENST00000455554 RPL28P46779 137 aaKnown RBP1.3□□□□□ -2.2
LINC02540-201ENST00000455554 SYCNQ0VAF6 134 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 DEFB116Q30KQ4 102 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 ATP5EP2Q5VTU8 51 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 LINC00322Q6ZN03 302 aaPredicted RBP1.3□□□□□ -2.2
LINC02540-201ENST00000455554 NTM-AS1Q6ZSK4 140 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 ZNF826PQ6ZT77 177 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 MIR17HGQ75NE6 70 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 PRNTQ86SH4 94 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 DYNLRB2Q8TF09 96 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 RMI2Q96E14 147 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 KRTAP4-1Q9BYQ7 146 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 C8orf17Q9NRJ1 99 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 ICOSQ9Y6W8 199 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 COL5A1P20908 1838 aaPredicted RBP1.3□□□□□ -2.2
LINC02540-201ENST00000455554 SVILO95425 2214 aa1.3□□□□□ -2.2
LINC02540-201ENST00000455554 COL4A6Q14031 1691 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 HIVEP2P31629 2446 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 DSCAML1Q8TD84 2053 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 IGLV2-18A0A075B6J9 118 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 TRAV23DV6A0A075B6W5 121 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 IGHV3-72A0A0B4J1Y9 119 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV1-6A0A0C4DH72 117 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 TRBV6-1A0A0K0K1D8 114 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 hDV103S1A0JD37 113 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 C10orf142B7Z368 130 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 BPY2O14599 106 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 SH2D1AO60880 128 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 ERC2-IT1O76042 136 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 IGHV3-11P01762 117 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 BAALC-AS2P0C853 105 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 PI4KAP42356 2102 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 FBXL19-AS1Q494R0 122 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 LINC01554Q52M75 96 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 RNASE13Q5GAN3 156 aaKnown RBP1.29□□□□□ -2.2
LINC02540-201ENST00000455554 MUSTN1Q8IVN3 82 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 LINC00269Q8N2A0 174 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 ITLN2Q8WWU7 325 aaPredicted RBP1.29□□□□□ -2.2
LINC02540-201ENST00000455554 CLEC2BQ92478 149 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 TMEM141Q96I45 108 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 FAM167A-AS1Q96KT0 104 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 AMELXQ99217 191 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 ZNRD1Q9P1U0 126 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 C22orf24Q9Y442 160 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 PHLDA3Q9Y5J5 127 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 DOCK10Q96BY6 2186 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 DNAJC13O75165 2243 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 KNTC1P50748 2209 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 LTBP2Q14767 1821 aa1.29□□□□□ -2.2
LINC02540-201ENST00000455554 KIAA0100Q14667 2235 aaKnown RBP1.28□□□□□ -2.2
LINC02540-201ENST00000455554 IGLV2-33A0A075B6J2 118 aaPredicted RBP1.28□□□□□ -2.2
LINC02540-201ENST00000455554 IGLV3-12A0A075B6K2 115 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 IGHV1-45A0A0A0MS14 117 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 TRAV22A0A0B4J277 110 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 A0A0J9YX75 114 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 PINLYPA6NC86 204 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 IGIPA6NJ69 53 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 C11orf86A6NJI1 115 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 C16orf90A8MZG2 172 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 I3L3M4 83 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 GNRH2O43555 120 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 COX7A2P2O60397 106 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 DNAL4O96015 105 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 IGLV3-1P01715 115 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 IGLV3-27P01718 113 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 IGKV1-16P04430 117 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 CD28P10747 220 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 EIF4EBP1Q13541 118 aaPredicted RBP1.28□□□□□ -2.2
LINC02540-201ENST00000455554 PATE2Q6UY27 113 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 Q6ZS52 159 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 Q8IYB0 196 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 Q8N6K4 173 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 UBALD1Q8TB05 177 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 CIRBP-AS1Q8TBR5 109 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 KLF14Q8TD94 323 aaPredicted RBP1.28□□□□□ -2.2
LINC02540-201ENST00000455554 OBSCN-AS1Q96MR7 158 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 LINC00846Q9NV44 126 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 CRCT1Q9UGL9 99 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 NDUFA12Q9UI09 145 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 SNURFQ9Y675 71 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 MUC4Q99102 2169 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 USF3Q68DE3 2245 aa1.28□□□□□ -2.2
LINC02540-201ENST00000455554 PRRC2BQ5JSZ5 2229 aaKnown RBP1.27□□□□□ -2.21
LINC02540-201ENST00000455554 COL27A1Q8IZC6 1860 aaPredicted RBP1.27□□□□□ -2.21
LINC02540-201ENST00000455554 IGLV3-9A0A075B6K5 115 aa1.27□□□□□ -2.21
LINC02540-201ENST00000455554 IGHV3-49A0A0A0MS15 119 aa1.27□□□□□ -2.21
LINC02540-201ENST00000455554 IGKV1-12A0A0C4DH73 117 aa1.27□□□□□ -2.21
LINC02540-201ENST00000455554 IGHV7-4-1A0A0J9YVY3 117 aa1.27□□□□□ -2.21
LINC02540-201ENST00000455554 TRBV7-4A0A0J9YYF1 115 aa1.27□□□□□ -2.21
LINC02540-201ENST00000455554 SDHAF1A6NFY7 115 aa1.27□□□□□ -2.21
LINC02540-201ENST00000455554 HCG22E2RYF7 251 aa1.27□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 168.1 ms