RNA–Protein interactions for RNA: ENST00000454555.2

LINC00343-203, long intergenic non-protein coding RNA 343, humanhuman

TSL 2 BASIC

Gene LINC00343, Length 1,765 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00343-203ENST00000454555 DUX3Q96PT4 197 aa9.69□□□□□ -0.86
LINC00343-203ENST00000454555 TIMM21Q9BVV7 248 aa9.69□□□□□ -0.86
LINC00343-203ENST00000454555 SPINK13Q1W4C9 94 aa9.68□□□□□ -0.86
LINC00343-203ENST00000454555 MUSTN1Q8IVN3 82 aa9.68□□□□□ -0.86
LINC00343-203ENST00000454555 COL6A5A8TX70 2615 aa9.68□□□□□ -0.86
LINC00343-203ENST00000454555 TRAV12-2A0A075B6T6 113 aa9.68□□□□□ -0.86
LINC00343-203ENST00000454555 A0A0J9YXY3 114 aa9.68□□□□□ -0.86
LINC00343-203ENST00000454555 TINCRA0A1B0GVN0 87 aa9.68□□□□□ -0.86
LINC00343-203ENST00000454555 TIMM17BO60830 172 aa9.68□□□□□ -0.86
LINC00343-203ENST00000454555 DNAJC30Q96LL9 226 aa9.68□□□□□ -0.86
LINC00343-203ENST00000454555 IGHV1-58A0A0C4DH39 117 aa9.67□□□□□ -0.86
LINC00343-203ENST00000454555 A0A0J9YXV3 536 aa9.67□□□□□ -0.86
LINC00343-203ENST00000454555 IGHV3-30-3P0DP02 117 aa9.67□□□□□ -0.86
LINC00343-203ENST00000454555 SLURP1P55000 103 aa9.67□□□□□ -0.86
LINC00343-203ENST00000454555 SFTA2Q6UW10 78 aa9.67□□□□□ -0.86
LINC00343-203ENST00000454555 LINC00467Q9BRT7 94 aa9.67□□□□□ -0.86
LINC00343-203ENST00000454555 TENM1Q9UKZ4 2725 aa9.67□□□□□ -0.86
LINC00343-203ENST00000454555 C9JAW5 83 aa9.66□□□□□ -0.86
LINC00343-203ENST00000454555 PF4P02776 101 aa9.66□□□□□ -0.86
LINC00343-203ENST00000454555 EDN2P20800 178 aa9.66□□□□□ -0.86
LINC00343-203ENST00000454555 RPL13AP40429 203 aaKnown RBP9.66□□□□□ -0.86
LINC00343-203ENST00000454555 TNFRSF18Q9Y5U5 241 aa9.66□□□□□ -0.86
LINC00343-203ENST00000454555 COX6CP09669 75 aa9.65□□□□□ -0.86
LINC00343-203ENST00000454555 IFITM1P13164 125 aa9.65□□□□□ -0.86
LINC00343-203ENST00000454555 XGP55808 180 aa9.65□□□□□ -0.86
LINC00343-203ENST00000454555 ZNF415Q09FC8 603 aa9.65□□□□□ -0.86
LINC00343-203ENST00000454555 LINC00482Q8N8I6 264 aa9.65□□□□□ -0.86
LINC00343-203ENST00000454555 GEMIN7Q9H840 131 aaKnown RBP9.65□□□□□ -0.86
LINC00343-203ENST00000454555 TRBV10-2A0A0K0K1G8 114 aa9.65□□□□□ -0.87
LINC00343-203ENST00000454555 MT-ATP8P03928 68 aa9.65□□□□□ -0.87
LINC00343-203ENST00000454555 SYNJ2BPP57105 145 aa9.65□□□□□ -0.87
LINC00343-203ENST00000454555 Q1RN00 199 aa9.65□□□□□ -0.87
LINC00343-203ENST00000454555 LINC01620Q4KN68 170 aa9.65□□□□□ -0.87
LINC00343-203ENST00000454555 OPRPNQ99935 248 aaPredicted RBP9.65□□□□□ -0.87
LINC00343-203ENST00000454555 ANK2Q01484 3957 aa9.64□□□□□ -0.87
LINC00343-203ENST00000454555 IGKV3-20P01619 116 aa9.64□□□□□ -0.87
LINC00343-203ENST00000454555 MIAQ16674 131 aa9.64□□□□□ -0.87
LINC00343-203ENST00000454555 WFDC9Q8NEX5 89 aa9.64□□□□□ -0.87
LINC00343-203ENST00000454555 LITAFQ99732 161 aa9.64□□□□□ -0.87
LINC00343-203ENST00000454555 H3BT86 120 aa9.63□□□□□ -0.87
LINC00343-203ENST00000454555 ZFAND6Q6FIF0 208 aa9.63□□□□□ -0.87
LINC00343-203ENST00000454555 VSIG2Q96IQ7 327 aa9.63□□□□□ -0.87
LINC00343-203ENST00000454555 SPXQ9BT56 116 aa9.63□□□□□ -0.87
LINC00343-203ENST00000454555 PEMTQ9UBM1 199 aa9.63□□□□□ -0.87
LINC00343-203ENST00000454555 EIF4EBP3O60516 100 aaPredicted RBP9.63□□□□□ -0.87
LINC00343-203ENST00000454555 COPS9Q8WXC6 57 aa9.63□□□□□ -0.87
LINC00343-203ENST00000454555 NDUFA12Q9UI09 145 aa9.63□□□□□ -0.87
LINC00343-203ENST00000454555 Q6Q795 121 aa9.62□□□□□ -0.87
LINC00343-203ENST00000454555 STAB1Q9NY15 2570 aa9.61□□□□□ -0.87
LINC00343-203ENST00000454555 TIRAPP58753 221 aa9.61□□□□□ -0.87
LINC00343-203ENST00000454555 MRPL23Q16540 153 aaKnown RBP9.61□□□□□ -0.87
LINC00343-203ENST00000454555 UBE2D4Q9Y2X8 147 aa9.61□□□□□ -0.87
LINC00343-203ENST00000454555 ICOSQ9Y6W8 199 aa9.61□□□□□ -0.87
LINC00343-203ENST00000454555 DEFB104AQ8WTQ1 72 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 FAM104AQ969W3 186 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 CLUHP3Q96NS8 147 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 IGHV3-64A0A075B6Q5 118 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 IGLV5-45A0A087WSX0 123 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 H3BMM0 161 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 TRIAP1O43715 76 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 IGHV3-53P01767 116 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 CHCHD7Q9BUK0 85 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 PPDPFQ9H3Y8 114 aa9.6□□□□□ -0.87
LINC00343-203ENST00000454555 DNHD1Q96M86 4753 aa9.59□□□□□ -0.87
LINC00343-203ENST00000454555 SNCGO76070 127 aa9.59□□□□□ -0.87
LINC00343-203ENST00000454555 CIRBPQ14011 172 aaKnown RBP9.59□□□□□ -0.87
LINC00343-203ENST00000454555 BEAN1Q3B7T3 259 aa9.59□□□□□ -0.87
LINC00343-203ENST00000454555 UBE2WQ96B02 151 aa9.59□□□□□ -0.87
LINC00343-203ENST00000454555 FAM240AA0A1B0GVK7 77 aa9.58□□□□□ -0.88
LINC00343-203ENST00000454555 NTN5Q8WTR8 489 aaPredicted RBP9.58□□□□□ -0.88
LINC00343-203ENST00000454555 H7C2G1 150 aa9.58□□□□□ -0.88
LINC00343-203ENST00000454555 NDUFA1O15239 70 aa9.58□□□□□ -0.88
LINC00343-203ENST00000454555 PRSS2P07478 247 aa9.58□□□□□ -0.88
LINC00343-203ENST00000454555 RBMY1A1P0DJD3 496 aaKnown RBP9.58□□□□□ -0.88
LINC00343-203ENST00000454555 RBMY1CP0DJD4 496 aa9.58□□□□□ -0.88
LINC00343-203ENST00000454555 RBMY1FQ15415 496 aaKnown RBP9.58□□□□□ -0.88
LINC00343-203ENST00000454555 FAM19A3Q7Z5A8 133 aa9.58□□□□□ -0.88
LINC00343-203ENST00000454555 TMEM61Q8N0U2 210 aa9.58□□□□□ -0.88
LINC00343-203ENST00000454555 TRAV8-4A0A0B4J246 113 aa9.57□□□□□ -0.88
LINC00343-203ENST00000454555 DEFB131AP59861 70 aa9.57□□□□□ -0.88
LINC00343-203ENST00000454555 TRAV8-3A0A0A6YYJ7 113 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 LST1O00453 97 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 RS1O15537 224 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 HERVK_113P63121 156 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 GAGE2BQ13066 116 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 GAGE2EQ4V326 116 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 C9orf66Q5T8R8 295 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 C2orf82Q6UX34 121 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 ANAPC13Q9BS18 74 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 GAGE2DQ9UEU5 116 aa9.56□□□□□ -0.88
LINC00343-203ENST00000454555 TRAV26-1A0A087WT03 109 aa9.55□□□□□ -0.88
LINC00343-203ENST00000454555 WIPF1O43516 503 aa9.55□□□□□ -0.88
LINC00343-203ENST00000454555 INSP01308 110 aa9.55□□□□□ -0.88
LINC00343-203ENST00000454555 DEFB121Q5J5C9 76 aa9.55□□□□□ -0.88
LINC00343-203ENST00000454555 CSDC2Q9Y534 153 aaKnown RBP9.55□□□□□ -0.88
LINC00343-203ENST00000454555 TRRAPQ9Y4A5 3859 aa9.55□□□□□ -0.88
LINC00343-203ENST00000454555 KNCNA6PVL3 124 aa9.55□□□□□ -0.88
LINC00343-203ENST00000454555 IGLV1-51P01701 117 aa9.55□□□□□ -0.88
LINC00343-203ENST00000454555 DEFB114Q30KQ6 69 aa9.55□□□□□ -0.88
LINC00343-203ENST00000454555 WNK1Q9H4A3 2382 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms