RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 CSDC2Q9Y534 153 aaKnown RBP9.28□□□□□ -0.92
HDAC4-205ENST00000454542 IGLV10-54A0A075B6I4 117 aa9.27□□□□□ -0.93
HDAC4-205ENST00000454542 USP17L23D6RBM5 183 aa9.27□□□□□ -0.93
HDAC4-205ENST00000454542 C14orf177Q52M58 125 aa9.27□□□□□ -0.93
HDAC4-205ENST00000454542 OR5A1Q8NGJ0 315 aa9.27□□□□□ -0.93
HDAC4-205ENST00000454542 UBE2D4Q9Y2X8 147 aa9.27□□□□□ -0.93
HDAC4-205ENST00000454542 TIMM21Q9BVV7 248 aa9.26□□□□□ -0.93
HDAC4-205ENST00000454542 CDC42SE2Q9NRR3 84 aa9.26□□□□□ -0.93
HDAC4-205ENST00000454542 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.25□□□□□ -0.93
HDAC4-205ENST00000454542 TMEM101Q96IK0 257 aa9.25□□□□□ -0.93
HDAC4-205ENST00000454542 KRTAP17-1Q9BYP8 105 aa9.25□□□□□ -0.93
HDAC4-205ENST00000454542 S100PP25815 95 aa9.24□□□□□ -0.93
HDAC4-205ENST00000454542 SMAGPQ0VAQ4 97 aa9.24□□□□□ -0.93
HDAC4-205ENST00000454542 Q6ZSA8 131 aa9.24□□□□□ -0.93
HDAC4-205ENST00000454542 PRSS1P07477 247 aa9.23□□□□□ -0.93
HDAC4-205ENST00000454542 XGP55808 180 aa9.23□□□□□ -0.93
HDAC4-205ENST00000454542 Q6ZUT4 128 aa9.23□□□□□ -0.93
HDAC4-205ENST00000454542 ZNF664Q8N3J9 261 aa9.23□□□□□ -0.93
HDAC4-205ENST00000454542 CHCHD10Q8WYQ3 142 aaPredicted RBP9.23□□□□□ -0.93
HDAC4-205ENST00000454542 FAM104AQ969W3 186 aa9.23□□□□□ -0.93
HDAC4-205ENST00000454542 TMEM18Q96B42 140 aa9.23□□□□□ -0.93
HDAC4-205ENST00000454542 GNB1LQ9BYB4 327 aa9.23□□□□□ -0.93
HDAC4-205ENST00000454542 MAP1LC3AQ9H492 121 aa9.23□□□□□ -0.93
HDAC4-205ENST00000454542 RPS10P5Q9NQ39 176 aa9.23□□□□□ -0.93
HDAC4-205ENST00000454542 LINC00959A0A1B0GUT2 108 aa9.22□□□□□ -0.93
HDAC4-205ENST00000454542 GAGE12HA6NDE8 117 aa9.22□□□□□ -0.93
HDAC4-205ENST00000454542 RPL39P62891 51 aaKnown RBP9.22□□□□□ -0.93
HDAC4-205ENST00000454542 FOXI1Q12951 378 aa9.22□□□□□ -0.93
HDAC4-205ENST00000454542 SVBPQ8N300 66 aa9.22□□□□□ -0.93
HDAC4-205ENST00000454542 C15orf56Q8N910 161 aa9.22□□□□□ -0.93
HDAC4-205ENST00000454542 SPANXA1Q9NS26 97 aa9.22□□□□□ -0.93
HDAC4-205ENST00000454542 FAT1Q14517 4588 aa9.22□□□□□ -0.93
HDAC4-205ENST00000454542 IGKV3OR2-268A0A0C4DH90 116 aa9.21□□□□□ -0.94
HDAC4-205ENST00000454542 APOC3P02656 99 aa9.21□□□□□ -0.94
HDAC4-205ENST00000454542 COX19Q49B96 90 aa9.21□□□□□ -0.94
HDAC4-205ENST00000454542 Q8N8P6 123 aa9.21□□□□□ -0.94
HDAC4-205ENST00000454542 K7EMI3 77 aa9.2□□□□□ -0.94
HDAC4-205ENST00000454542 SNAPINO95295 136 aa9.2□□□□□ -0.94
HDAC4-205ENST00000454542 MT-ND6P03923 174 aa9.2□□□□□ -0.94
HDAC4-205ENST00000454542 CNBPP62633 177 aaKnown RBP9.2□□□□□ -0.94
HDAC4-205ENST00000454542 MRPS36P82909 103 aaKnown RBP9.2□□□□□ -0.94
HDAC4-205ENST00000454542 NDUFA5Q16718 116 aa9.2□□□□□ -0.94
HDAC4-205ENST00000454542 FAM30AQ9NZY2 134 aa9.2□□□□□ -0.94
HDAC4-205ENST00000454542 VPS13BQ7Z7G8 4022 aa9.2□□□□□ -0.94
HDAC4-205ENST00000454542 CCL25O15444 150 aa9.19□□□□□ -0.94
HDAC4-205ENST00000454542 DGAT2L7PQ6IED9 249 aa9.19□□□□□ -0.94
HDAC4-205ENST00000454542 PYGO1Q9Y3Y4 419 aa9.19□□□□□ -0.94
HDAC4-205ENST00000454542 GVQW2A0A096LPI5 108 aaPredicted RBP9.18□□□□□ -0.94
HDAC4-205ENST00000454542 LOC389332A0A1B0GUA5 103 aa9.18□□□□□ -0.94
HDAC4-205ENST00000454542 KIAA1644Q3SXP7 199 aa9.18□□□□□ -0.94
HDAC4-205ENST00000454542 CD164L2Q6UWJ8 174 aa9.18□□□□□ -0.94
HDAC4-205ENST00000454542 Q8N1X5 172 aa9.18□□□□□ -0.94
HDAC4-205ENST00000454542 NXT2Q9NPJ8 142 aaKnown RBP9.18□□□□□ -0.94
HDAC4-205ENST00000454542 RAB5AP20339 215 aa9.17□□□□□ -0.94
HDAC4-205ENST00000454542 XCL1P47992 114 aa9.17□□□□□ -0.94
HDAC4-205ENST00000454542 SS18Q15532 418 aa9.17□□□□□ -0.94
HDAC4-205ENST00000454542 LINC01620Q4KN68 170 aa9.17□□□□□ -0.94
HDAC4-205ENST00000454542 ORMDL2Q53FV1 153 aa9.17□□□□□ -0.94
HDAC4-205ENST00000454542 RNASE13Q5GAN3 156 aaKnown RBP9.17□□□□□ -0.94
HDAC4-205ENST00000454542 C9orf163Q8N9P6 203 aa9.17□□□□□ -0.94
HDAC4-205ENST00000454542 YPEL4Q96NS1 127 aa9.17□□□□□ -0.94
HDAC4-205ENST00000454542 ALKBH7Q9BT30 221 aaPredicted RBP9.17□□□□□ -0.94
HDAC4-205ENST00000454542 ABCA13Q86UQ4 5058 aa9.16□□□□□ -0.94
HDAC4-205ENST00000454542 SLPIP03973 132 aa9.16□□□□□ -0.94
HDAC4-205ENST00000454542 KRTAP4-5Q9BYR2 181 aa9.16□□□□□ -0.94
HDAC4-205ENST00000454542 IGLV4-3A0A075B6K6 122 aa9.15□□□□□ -0.94
HDAC4-205ENST00000454542 TGIF2-C20orf24A0A0A6YYL0 155 aa9.15□□□□□ -0.94
HDAC4-205ENST00000454542 hDV102S1A0JD36 115 aa9.15□□□□□ -0.94
HDAC4-205ENST00000454542 LINC01546A6NGU7 62 aa9.15□□□□□ -0.94
HDAC4-205ENST00000454542 C1orf196B1AJZ1 125 aa9.15□□□□□ -0.94
HDAC4-205ENST00000454542 IFI27P40305 119 aaPredicted RBP9.15□□□□□ -0.94
HDAC4-205ENST00000454542 CFAP161Q6P656 301 aa9.15□□□□□ -0.94
HDAC4-205ENST00000454542 C2orf66Q6UXQ4 117 aa9.15□□□□□ -0.94
HDAC4-205ENST00000454542 MRPL18Q9H0U6 180 aaKnown RBP9.15□□□□□ -0.94
HDAC4-205ENST00000454542 CYSLTR1Q9Y271 337 aa9.15□□□□□ -0.94
HDAC4-205ENST00000454542 IGHV1-58A0A0C4DH39 117 aa9.14□□□□□ -0.95
HDAC4-205ENST00000454542 NPSP0C0P6 89 aa9.14□□□□□ -0.95
HDAC4-205ENST00000454542 OPRPNQ99935 248 aaPredicted RBP9.14□□□□□ -0.95
HDAC4-205ENST00000454542 TRAV13-1A0A0B4J241 112 aa9.13□□□□□ -0.95
HDAC4-205ENST00000454542 HAMPP81172 84 aa9.13□□□□□ -0.95
HDAC4-205ENST00000454542 IGIPA6NJ69 53 aa9.12□□□□□ -0.95
HDAC4-205ENST00000454542 HIGD2BQ4VC39 106 aa9.12□□□□□ -0.95
HDAC4-205ENST00000454542 LINC00173Q6ZV60 143 aa9.12□□□□□ -0.95
HDAC4-205ENST00000454542 AP5S1Q9NUS5 200 aa9.12□□□□□ -0.95
HDAC4-205ENST00000454542 PCLOQ9Y6V0 5065 aa9.11□□□□□ -0.95
HDAC4-205ENST00000454542 IFITM10A6NMD0 228 aa9.11□□□□□ -0.95
HDAC4-205ENST00000454542 FABP9Q0Z7S8 132 aa9.11□□□□□ -0.95
HDAC4-205ENST00000454542 SDIM1Q6ZPB5 146 aa9.11□□□□□ -0.95
HDAC4-205ENST00000454542 SCXQ7RTU7 201 aa9.11□□□□□ -0.95
HDAC4-205ENST00000454542 SLC7A5P1Q8MH63 180 aa9.11□□□□□ -0.95
HDAC4-205ENST00000454542 TMEM141Q96I45 108 aa9.11□□□□□ -0.95
HDAC4-205ENST00000454542 AMELXQ99217 191 aa9.11□□□□□ -0.95
HDAC4-205ENST00000454542 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.1□□□□□ -0.95
HDAC4-205ENST00000454542 IGHV3OR16-9A0A0B4J2B5 98 aa9.1□□□□□ -0.95
HDAC4-205ENST00000454542 COX7A2LO14548 114 aa9.1□□□□□ -0.95
HDAC4-205ENST00000454542 CIRBPQ14011 172 aaKnown RBP9.1□□□□□ -0.95
HDAC4-205ENST00000454542 TOMM6Q96B49 74 aa9.1□□□□□ -0.95
HDAC4-205ENST00000454542 TIMM17AQ99595 171 aa9.1□□□□□ -0.95
HDAC4-205ENST00000454542 CHAC1Q9BUX1 264 aa9.1□□□□□ -0.95
HDAC4-205ENST00000454542 G0S2P27469 103 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms