RNA–Protein interactions for RNA: ENST00000453744.6

UBE2D3-210, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene UBE2D3, Length 3,990 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-210ENST00000453744 IGHV4-30-2A0A087WSY4 118 aa10.19□□□□□ -0.78
UBE2D3-210ENST00000453744 EIF4EBP3O60516 100 aaPredicted RBP10.19□□□□□ -0.78
UBE2D3-210ENST00000453744 PFN2P35080 140 aa10.19□□□□□ -0.78
UBE2D3-210ENST00000453744 NBL1P41271 181 aa10.19□□□□□ -0.78
UBE2D3-210ENST00000453744 COPS9Q8WXC6 57 aa10.19□□□□□ -0.78
UBE2D3-210ENST00000453744 DEFB112Q30KQ8 113 aa10.19□□□□□ -0.78
UBE2D3-210ENST00000453744 SLURP1P55000 103 aa10.19□□□□□ -0.78
UBE2D3-210ENST00000453744 H3BUA1 57 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 LST1O00453 97 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 SPANXA1Q9NS26 97 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 PAX4O43316 350 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 NDUFA7O95182 113 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 DAZ2Q13117 558 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 DAZ4Q86SG3 579 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 NRGNQ92686 78 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 DAZ3Q9NR90 486 aaKnown RBP10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 DCHS2Q6V1P9 2916 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 TRGV2A0A075B6R0 118 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 IGKV3D-7A0A0C4DH55 119 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 C19orf84I3L1E1 186 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 PIK3CD-AS1Q5SR53 167 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 SHISA2Q6UWI4 295 aa10.18□□□□□ -0.78
UBE2D3-210ENST00000453744 A6NDX4 124 aa10.17□□□□□ -0.78
UBE2D3-210ENST00000453744 RPL36AP83881 106 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-210ENST00000453744 RPL36ALQ969Q0 106 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-210ENST00000453744 K7EQG2 157 aa10.17□□□□□ -0.78
UBE2D3-210ENST00000453744 HIST1H4AP62805 103 aaKnown RBP10.17□□□□□ -0.78
UBE2D3-210ENST00000453744 TINCRA0A1B0GVN0 87 aa10.17□□□□□ -0.78
UBE2D3-210ENST00000453744 K7EMT4 169 aa10.17□□□□□ -0.78
UBE2D3-210ENST00000453744 ATRQ13535 2644 aa10.17□□□□□ -0.78
UBE2D3-210ENST00000453744 MRPS36P82909 103 aaKnown RBP10.16□□□□□ -0.78
UBE2D3-210ENST00000453744 STHQ8IWL8 128 aa10.16□□□□□ -0.78
UBE2D3-210ENST00000453744 LINC00308Q8TCZ7 52 aa10.16□□□□□ -0.78
UBE2D3-210ENST00000453744 B4DSR2 109 aa10.15□□□□□ -0.78
UBE2D3-210ENST00000453744 HERVK_113P63121 156 aa10.15□□□□□ -0.79
UBE2D3-210ENST00000453744 Q6ZSN1 163 aa10.14□□□□□ -0.79
UBE2D3-210ENST00000453744 FAM19A4Q96LR4 140 aa10.14□□□□□ -0.79
UBE2D3-210ENST00000453744 INSP01308 110 aa10.13□□□□□ -0.79
UBE2D3-210ENST00000453744 ATP5G1P05496 136 aa10.13□□□□□ -0.79
UBE2D3-210ENST00000453744 COX7A2LO14548 114 aa10.13□□□□□ -0.79
UBE2D3-210ENST00000453744 UBE2D4Q9Y2X8 147 aa10.13□□□□□ -0.79
UBE2D3-210ENST00000453744 USP24Q9UPU5 2620 aa10.13□□□□□ -0.79
UBE2D3-210ENST00000453744 SPANXDQ9BXN6 97 aa10.13□□□□□ -0.79
UBE2D3-210ENST00000453744 SPANXCQ9NY87 97 aa10.13□□□□□ -0.79
UBE2D3-210ENST00000453744 MAST4O15021 2626 aa10.12□□□□□ -0.79
UBE2D3-210ENST00000453744 INAFM2P0DMQ5 153 aa10.12□□□□□ -0.79
UBE2D3-210ENST00000453744 COX6A2Q02221 97 aa10.12□□□□□ -0.79
UBE2D3-210ENST00000453744 PYGO1Q9Y3Y4 419 aa10.12□□□□□ -0.79
UBE2D3-210ENST00000453744 AVPP01185 164 aa10.11□□□□□ -0.79
UBE2D3-210ENST00000453744 SDIM1Q6ZPB5 146 aa10.11□□□□□ -0.79
UBE2D3-210ENST00000453744 KLK5Q9Y337 293 aaPredicted RBP10.11□□□□□ -0.79
UBE2D3-210ENST00000453744 Q6Q795 121 aa10.11□□□□□ -0.79
UBE2D3-210ENST00000453744 C14orf132Q9NPU4 83 aa10.11□□□□□ -0.79
UBE2D3-210ENST00000453744 TRGV4A0A0C4DH28 118 aa10.1□□□□□ -0.79
UBE2D3-210ENST00000453744 LINC00643Q86TS7 51 aa10.1□□□□□ -0.79
UBE2D3-210ENST00000453744 MIR7-3HGQ8N6C7 128 aa10.1□□□□□ -0.79
UBE2D3-210ENST00000453744 PEMTQ9UBM1 199 aa10.1□□□□□ -0.79
UBE2D3-210ENST00000453744 IGLV1-40P01703 118 aa10.1□□□□□ -0.79
UBE2D3-210ENST00000453744 ACYP1P07311 99 aa10.1□□□□□ -0.79
UBE2D3-210ENST00000453744 C5orf38Q86SI9 138 aa10.1□□□□□ -0.79
UBE2D3-210ENST00000453744 SND1-IT1Q9HBX3 110 aa10.1□□□□□ -0.79
UBE2D3-210ENST00000453744 RBMY1A1P0DJD3 496 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-210ENST00000453744 RBMY1CP0DJD4 496 aa10.09□□□□□ -0.79
UBE2D3-210ENST00000453744 RPL35AP18077 110 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-210ENST00000453744 RBMY1FQ15415 496 aaKnown RBP10.09□□□□□ -0.79
UBE2D3-210ENST00000453744 C18orf65Q6ZTR6 163 aa10.09□□□□□ -0.79
UBE2D3-210ENST00000453744 Q8N2B8 174 aa10.09□□□□□ -0.79
UBE2D3-210ENST00000453744 C10orf105Q8TEF2 133 aa10.09□□□□□ -0.79
UBE2D3-210ENST00000453744 NDUFA1O15239 70 aa10.08□□□□□ -0.8
UBE2D3-210ENST00000453744 CHCHD7Q9BUK0 85 aa10.08□□□□□ -0.8
UBE2D3-210ENST00000453744 TIRAPP58753 221 aa10.08□□□□□ -0.8
UBE2D3-210ENST00000453744 C6orf226Q5I0X4 101 aa10.08□□□□□ -0.8
UBE2D3-210ENST00000453744 LITAFQ99732 161 aa10.08□□□□□ -0.8
UBE2D3-210ENST00000453744 A0A1B0GX51 115 aa10.07□□□□□ -0.8
UBE2D3-210ENST00000453744 NOP10Q9NPE3 64 aaKnown RBP10.07□□□□□ -0.8
UBE2D3-210ENST00000453744 LECT2O14960 151 aa10.07□□□□□ -0.8
UBE2D3-210ENST00000453744 SLPIP03973 132 aa10.07□□□□□ -0.8
UBE2D3-210ENST00000453744 PSMB8P28062 276 aa10.07□□□□□ -0.8
UBE2D3-210ENST00000453744 TMEM126AQ9H061 195 aa10.07□□□□□ -0.8
UBE2D3-210ENST00000453744 LINC00694P0DN24 101 aa10.07□□□□□ -0.8
UBE2D3-210ENST00000453744 CLPSL2Q6UWE3 100 aa10.07□□□□□ -0.8
UBE2D3-210ENST00000453744 RBMY1BA6NDE4 496 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-210ENST00000453744 RBMY1EA6NEQ0 496 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-210ENST00000453744 RBMY1DP0C7P1 496 aaKnown RBP10.06□□□□□ -0.8
UBE2D3-210ENST00000453744 TMEM243Q9BU79 118 aa10.06□□□□□ -0.8
UBE2D3-210ENST00000453744 TRAV13-2A0A0B4J235 113 aa10.06□□□□□ -0.8
UBE2D3-210ENST00000453744 hADV29S1A0JD25 119 aa10.06□□□□□ -0.8
UBE2D3-210ENST00000453744 PPDPFQ9H3Y8 114 aa10.06□□□□□ -0.8
UBE2D3-210ENST00000453744 LINC00242Q5T6M2 205 aa10.05□□□□□ -0.8
UBE2D3-210ENST00000453744 CITED2Q99967 270 aaPredicted RBP10.05□□□□□ -0.8
UBE2D3-210ENST00000453744 M0QXV9 152 aa10.05□□□□□ -0.8
UBE2D3-210ENST00000453744 MALP21145 153 aa10.05□□□□□ -0.8
UBE2D3-210ENST00000453744 Q6ZTI0 123 aa10.05□□□□□ -0.8
UBE2D3-210ENST00000453744 LOC107984640A0A0U1RRK4 108 aa10.04□□□□□ -0.8
UBE2D3-210ENST00000453744 C3orf22Q8N5N4 141 aa10.04□□□□□ -0.8
UBE2D3-210ENST00000453744 ANKRD17O75179 2603 aaKnown RBP10.04□□□□□ -0.8
UBE2D3-210ENST00000453744 HIST2H2BCQ6DN03 193 aa10.03□□□□□ -0.8
UBE2D3-210ENST00000453744 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP10.03□□□□□ -0.8
UBE2D3-210ENST00000453744 HRNRQ86YZ3 2850 aaPredicted RBP10.03□□□□□ -0.8
UBE2D3-210ENST00000453744 FAM240AA0A1B0GVK7 77 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms