RNA–Protein interactions for RNA: ENST00000452979.5

HERC3-207, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 3, humanhuman

TSL 3

Gene HERC3, Length 887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC3-207ENST00000452979 CKS2P33552 79 aa7.52□□□□□ -1.21
HERC3-207ENST00000452979 SREK1IP1Q8N9Q2 155 aaPredicted RBP7.52□□□□□ -1.21
HERC3-207ENST00000452979 C1orf43Q9BWL3 253 aa7.52□□□□□ -1.21
HERC3-207ENST00000452979 NIT2Q9NQR4 276 aa7.52□□□□□ -1.21
HERC3-207ENST00000452979 TRAPPC1Q9Y5R8 145 aa7.52□□□□□ -1.21
HERC3-207ENST00000452979 PPBPP02775 128 aa7.51□□□□□ -1.21
HERC3-207ENST00000452979 RAB5AP20339 215 aa7.51□□□□□ -1.21
HERC3-207ENST00000452979 FABP9Q0Z7S8 132 aa7.51□□□□□ -1.21
HERC3-207ENST00000452979 ORMDL3Q8N138 153 aa7.51□□□□□ -1.21
HERC3-207ENST00000452979 C9orf163Q8N9P6 203 aa7.51□□□□□ -1.21
HERC3-207ENST00000452979 PHOX2AO14813 284 aa7.5□□□□□ -1.21
HERC3-207ENST00000452979 TNFRSF6BO95407 300 aa7.5□□□□□ -1.21
HERC3-207ENST00000452979 PRELID3AQ96N28 172 aa7.5□□□□□ -1.21
HERC3-207ENST00000452979 TNXBP22105 4242 aa7.49□□□□□ -1.21
HERC3-207ENST00000452979 TRBV6-8A0A0A6YYG3 113 aa7.49□□□□□ -1.21
HERC3-207ENST00000452979 SDHAF1A6NFY7 115 aa7.49□□□□□ -1.21
HERC3-207ENST00000452979 USP17L23D6RBM5 183 aa7.49□□□□□ -1.21
HERC3-207ENST00000452979 TMEM262E9PQX1 116 aa7.49□□□□□ -1.21
HERC3-207ENST00000452979 PRSS1P07477 247 aa7.49□□□□□ -1.21
HERC3-207ENST00000452979 SUMO2P61956 95 aaKnown RBP7.49□□□□□ -1.21
HERC3-207ENST00000452979 Q6ZRU5 148 aa7.49□□□□□ -1.21
HERC3-207ENST00000452979 ALKBH7Q9BT30 221 aaPredicted RBP7.49□□□□□ -1.21
HERC3-207ENST00000452979 ST20Q9HBF5 79 aa7.49□□□□□ -1.21
HERC3-207ENST00000452979 CRPP02741 224 aa7.48□□□□□ -1.21
HERC3-207ENST00000452979 TRGC2P03986 189 aa7.48□□□□□ -1.21
HERC3-207ENST00000452979 POLR2KP53803 58 aaKnown RBP7.48□□□□□ -1.21
HERC3-207ENST00000452979 MIAQ16674 131 aa7.48□□□□□ -1.21
HERC3-207ENST00000452979 SDIM1Q6ZPB5 146 aa7.48□□□□□ -1.21
HERC3-207ENST00000452979 NTM-AS1Q6ZSK4 140 aa7.48□□□□□ -1.21
HERC3-207ENST00000452979 C20orf78Q9BR46 151 aa7.48□□□□□ -1.21
HERC3-207ENST00000452979 SMIM2Q9BVW6 85 aa7.48□□□□□ -1.21
HERC3-207ENST00000452979 LAMTOR2Q9Y2Q5 125 aa7.48□□□□□ -1.21
HERC3-207ENST00000452979 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.48□□□□□ -1.21
HERC3-207ENST00000452979 PANO1I0J062 215 aa7.47□□□□□ -1.21
HERC3-207ENST00000452979 PPP1R17O96001 155 aa7.47□□□□□ -1.21
HERC3-207ENST00000452979 TSHBP01222 138 aa7.47□□□□□ -1.21
HERC3-207ENST00000452979 MPV17L2Q567V2 206 aa7.47□□□□□ -1.21
HERC3-207ENST00000452979 KRTAP26-1Q6PEX3 210 aa7.47□□□□□ -1.21
HERC3-207ENST00000452979 PRR34Q9NV39 138 aa7.47□□□□□ -1.21
HERC3-207ENST00000452979 TRBV27A0A0K0K1C4 114 aa7.46□□□□□ -1.22
HERC3-207ENST00000452979 PKIAP61925 76 aa7.46□□□□□ -1.22
HERC3-207ENST00000452979 RPL32P62910 135 aaKnown RBP7.46□□□□□ -1.22
HERC3-207ENST00000452979 CIRBPQ14011 172 aaKnown RBP7.46□□□□□ -1.22
HERC3-207ENST00000452979 IQCJQ1A5X6 159 aa7.46□□□□□ -1.22
HERC3-207ENST00000452979 MAP1LC3AQ9H492 121 aa7.46□□□□□ -1.22
HERC3-207ENST00000452979 LOC389332A0A1B0GUA5 103 aa7.45□□□□□ -1.22
HERC3-207ENST00000452979 PRSS47A8MTI9 375 aa7.45□□□□□ -1.22
HERC3-207ENST00000452979 I3L3M4 83 aa7.45□□□□□ -1.22
HERC3-207ENST00000452979 ANGP03950 147 aaKnown RBP7.45□□□□□ -1.22
HERC3-207ENST00000452979 C18orf32Q8TCD1 76 aa7.45□□□□□ -1.22
HERC3-207ENST00000452979 CHCHD5Q9BSY4 110 aa7.45□□□□□ -1.22
HERC3-207ENST00000452979 RNF213Q63HN8 5207 aa7.44□□□□□ -1.22
HERC3-207ENST00000452979 VCYO14598 125 aa7.44□□□□□ -1.22
HERC3-207ENST00000452979 PMCHP20382 165 aa7.44□□□□□ -1.22
HERC3-207ENST00000452979 IFI27P40305 119 aaPredicted RBP7.44□□□□□ -1.22
HERC3-207ENST00000452979 LRP2P98164 4655 aa7.44□□□□□ -1.22
HERC3-207ENST00000452979 COTL1Q14019 142 aa7.44□□□□□ -1.22
HERC3-207ENST00000452979 URB1-AS1Q96HZ7 61 aa7.44□□□□□ -1.22
HERC3-207ENST00000452979 TCAPO15273 167 aa7.43□□□□□ -1.22
HERC3-207ENST00000452979 AMTP48728 403 aa7.43□□□□□ -1.22
HERC3-207ENST00000452979 CNBPP62633 177 aaKnown RBP7.43□□□□□ -1.22
HERC3-207ENST00000452979 TMEM97Q5BJF2 176 aa7.43□□□□□ -1.22
HERC3-207ENST00000452979 Q8N8P6 123 aa7.43□□□□□ -1.22
HERC3-207ENST00000452979 TRBV25-1A0A075B6N4 114 aa7.42□□□□□ -1.22
HERC3-207ENST00000452979 IGHV1-24A0A0C4DH33 117 aa7.42□□□□□ -1.22
HERC3-207ENST00000452979 ESDP10768 282 aa7.42□□□□□ -1.22
HERC3-207ENST00000452979 RBX1P62877 108 aa7.42□□□□□ -1.22
HERC3-207ENST00000452979 LINC00269Q8N2A0 174 aa7.42□□□□□ -1.22
HERC3-207ENST00000452979 KIR2DL4Q99706 377 aa7.42□□□□□ -1.22
HERC3-207ENST00000452979 LINC01546A6NGU7 62 aa7.41□□□□□ -1.22
HERC3-207ENST00000452979 FCER1GP30273 86 aa7.41□□□□□ -1.22
HERC3-207ENST00000452979 LINC00310P59036 64 aa7.41□□□□□ -1.22
HERC3-207ENST00000452979 TMEM243Q9BU79 118 aa7.41□□□□□ -1.22
HERC3-207ENST00000452979 NXT2Q9NPJ8 142 aaKnown RBP7.41□□□□□ -1.22
HERC3-207ENST00000452979 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.4□□□□□ -1.22
HERC3-207ENST00000452979 IGKV2-29A2NJV5 120 aaPredicted RBP7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST1H2BKO60814 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST1H2BJP06899 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST1H2BOP23527 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST1H2BBP33778 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST1H2BDP58876 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST1H2BCP62807 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 GAGE6Q13070 117 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST2H2BEQ16778 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST1H2BHQ93079 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST1H2BNQ99877 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 HIST1H2BMQ99879 126 aa7.4□□□□□ -1.22
HERC3-207ENST00000452979 A0A087WYN8 130 aa7.39□□□□□ -1.23
HERC3-207ENST00000452979 UBE2L6O14933 153 aa7.39□□□□□ -1.23
HERC3-207ENST00000452979 SLPIP03973 132 aa7.39□□□□□ -1.23
HERC3-207ENST00000452979 PRSS3P2Q8NHM4 247 aa7.39□□□□□ -1.23
HERC3-207ENST00000452979 IGHV3-64A0A075B6Q5 118 aa7.38□□□□□ -1.23
HERC3-207ENST00000452979 A0A096LNJ9 63 aa7.38□□□□□ -1.23
HERC3-207ENST00000452979 TRAV8-4A0A0B4J246 113 aa7.38□□□□□ -1.23
HERC3-207ENST00000452979 K7EMI3 77 aa7.38□□□□□ -1.23
HERC3-207ENST00000452979 RPL39P62891 51 aaKnown RBP7.38□□□□□ -1.23
HERC3-207ENST00000452979 REG3AQ06141 175 aa7.38□□□□□ -1.23
HERC3-207ENST00000452979 RNASEKQ6P5S7 137 aaKnown RBP7.38□□□□□ -1.23
HERC3-207ENST00000452979 CLPSL2Q6UWE3 100 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms