RNA–Protein interactions for RNA: ENST00000449954.1

LINC01961-201, Transcript of long intergenic non-protein coding RNA 1961, humanhuman

TSL 5 BASIC

Gene LINC01961, Length 745 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01961-201ENST00000449954 SPANXN1Q5VSR9 72 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 RNASEKQ6P5S7 137 aaKnown RBP4.4□□□□□ -1.71
LINC01961-201ENST00000449954 COX8CQ7Z4L0 72 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 Q86TA4 180 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 OR2D3Q8NGH3 330 aa4.4□□□□□ -1.71
LINC01961-201ENST00000449954 OPRPNQ99935 248 aaPredicted RBP4.4□□□□□ -1.71
LINC01961-201ENST00000449954 RBM38Q9H0Z9 239 aaKnown RBP4.4□□□□□ -1.71
LINC01961-201ENST00000449954 IGKV2D-26A0A0A0MRZ7 120 aa4.39□□□□□ -1.71
LINC01961-201ENST00000449954 A0A1W2PPV4 95 aa4.39□□□□□ -1.71
LINC01961-201ENST00000449954 CXCL1P09341 107 aa4.39□□□□□ -1.71
LINC01961-201ENST00000449954 TLX1NBP0CAT3 122 aa4.39□□□□□ -1.71
LINC01961-201ENST00000449954 KRTAP6-3Q3LI67 103 aa4.39□□□□□ -1.71
LINC01961-201ENST00000449954 SPAG11AQ6PDA7 123 aa4.39□□□□□ -1.71
LINC01961-201ENST00000449954 MRPL35Q9NZE8 188 aaKnown RBP4.39□□□□□ -1.71
LINC01961-201ENST00000449954 NEBP20929 6669 aa4.39□□□□□ -1.71
LINC01961-201ENST00000449954 COX7A2LO14548 114 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 SNAI2O43623 268 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 NDUFB6O95139 128 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 S100A6P06703 90 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 ARL14EPLP0DKL9 152 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 RASL11AQ6T310 242 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 KIR2DL4Q99706 377 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 CTDSP1Q9GZU7 261 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 ANAPC11Q9NYG5 84 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 ZFP30Q9Y2G7 519 aa4.38□□□□□ -1.71
LINC01961-201ENST00000449954 A0A087WXM4 84 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 F8WDY8 70 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 G3V3Q6 166 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 KRTAP4-16G5E9R7 235 aaPredicted RBP4.37□□□□□ -1.71
LINC01961-201ENST00000449954 MGPP08493 103 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 OR5AL1P0C617 328 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 KRTAP7-1Q8IUC3 87 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 DAND5Q8N907 189 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 TMEM101Q96IK0 257 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 BTF3L4Q96K17 158 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 NIT2Q9NQR4 276 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 UBE2D4Q9Y2X8 147 aa4.37□□□□□ -1.71
LINC01961-201ENST00000449954 NCR2O95944 276 aa4.36□□□□□ -1.71
LINC01961-201ENST00000449954 SPAG11BQ08648 103 aa4.36□□□□□ -1.71
LINC01961-201ENST00000449954 SMDT1Q9H4I9 107 aa4.36□□□□□ -1.71
LINC01961-201ENST00000449954 IGKV2D-29A0A075B6S2 120 aaPredicted RBP4.35□□□□□ -1.71
LINC01961-201ENST00000449954 IGKV2-29A2NJV5 120 aaPredicted RBP4.35□□□□□ -1.71
LINC01961-201ENST00000449954 PRYO14603 147 aa4.35□□□□□ -1.71
LINC01961-201ENST00000449954 HMGB3O15347 200 aaKnown RBP4.35□□□□□ -1.71
LINC01961-201ENST00000449954 BCE1O60756 84 aa4.35□□□□□ -1.71
LINC01961-201ENST00000449954 GAGE2EQ4V326 116 aa4.35□□□□□ -1.71
LINC01961-201ENST00000449954 COX6B2Q6YFQ2 88 aa4.35□□□□□ -1.71
LINC01961-201ENST00000449954 OR10D4PQ8NGN7 298 aa4.35□□□□□ -1.71
LINC01961-201ENST00000449954 TMEM167BQ9NRX6 74 aa4.35□□□□□ -1.71
LINC01961-201ENST00000449954 LINC00846Q9NV44 126 aa4.35□□□□□ -1.71
LINC01961-201ENST00000449954 GAGE2DQ9UEU5 116 aa4.35□□□□□ -1.71
LINC01961-201ENST00000449954 NDUFA12Q9UI09 145 aa4.35□□□□□ -1.71
LINC01961-201ENST00000449954 IGLV8-61A0A075B6I0 122 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 NAP1L6A6NFF2 107 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 C1orf196B1AJZ1 125 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 PEX7O00628 323 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 NDUFA1O15239 70 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 NOL3O60936 208 aaKnown RBP4.34□□□□□ -1.71
LINC01961-201ENST00000449954 SCGB1D1O95968 90 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 APCSP02743 223 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 STAG3L2P0CL84 134 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 STAG3L3P0CL85 134 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 NTF3P20783 257 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 GCHFRP30047 84 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 CDC34P49427 236 aaPredicted RBP4.34□□□□□ -1.71
LINC01961-201ENST00000449954 IL15RAQ13261 267 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 TMEM241Q24JQ0 296 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 SCGB1C1Q8TD33 95 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 HIST1H2BAQ96A08 127 aa4.34□□□□□ -1.71
LINC01961-201ENST00000449954 MUC21A0A140T8X8 626 aa4.33□□□□□ -1.72
LINC01961-201ENST00000449954 A0A1W2PRE2 83 aa4.33□□□□□ -1.72
LINC01961-201ENST00000449954 CTRLP40313 264 aa4.33□□□□□ -1.72
LINC01961-201ENST00000449954 KRTAP20-1Q3LI63 56 aa4.33□□□□□ -1.72
LINC01961-201ENST00000449954 LBHQ53QV2 105 aaPredicted RBP4.33□□□□□ -1.72
LINC01961-201ENST00000449954 PYDC2Q56P42 97 aa4.33□□□□□ -1.72
LINC01961-201ENST00000449954 FMC1Q96HJ9 113 aa4.33□□□□□ -1.72
LINC01961-201ENST00000449954 SSTP61278 116 aa4.32□□□□□ -1.72
LINC01961-201ENST00000449954 UBE2G1P62253 170 aa4.32□□□□□ -1.72
LINC01961-201ENST00000449954 CNPY1Q3B7I2 92 aa4.32□□□□□ -1.72
LINC01961-201ENST00000449954 LRRC37A5PQ49AS3 106 aa4.32□□□□□ -1.72
LINC01961-201ENST00000449954 FAM19A2Q8N3H0 131 aa4.32□□□□□ -1.72
LINC01961-201ENST00000449954 KRTAP2-2Q9BYT5 123 aa4.32□□□□□ -1.72
LINC01961-201ENST00000449954 CXorf1O96002 111 aa4.31□□□□□ -1.72
LINC01961-201ENST00000449954 LTAP01374 205 aa4.31□□□□□ -1.72
LINC01961-201ENST00000449954 DEFA3P59666 94 aa4.31□□□□□ -1.72
LINC01961-201ENST00000449954 ALG5Q9Y673 324 aa4.31□□□□□ -1.72
LINC01961-201ENST00000449954 MUC12Q9UKN1 5478 aa4.3□□□□□ -1.72
LINC01961-201ENST00000449954 PCOTHQ58A44 107 aa4.3□□□□□ -1.72
LINC01961-201ENST00000449954 C9orf129Q5T035 196 aaKnown RBP4.3□□□□□ -1.72
LINC01961-201ENST00000449954 MRPL52Q86TS9 123 aaKnown RBP4.3□□□□□ -1.72
LINC01961-201ENST00000449954 NKX6-2Q9C056 277 aaPredicted RBP4.3□□□□□ -1.72
LINC01961-201ENST00000449954 CDC42SE2Q9NRR3 84 aa4.3□□□□□ -1.72
LINC01961-201ENST00000449954 C6orf48Q9UBA6 75 aa4.3□□□□□ -1.72
LINC01961-201ENST00000449954 NDUFC2-KCTD14E9PQ53 114 aa4.29□□□□□ -1.72
LINC01961-201ENST00000449954 S100A9P06702 114 aaKnown RBP4.29□□□□□ -1.72
LINC01961-201ENST00000449954 TRGC1P0CF51 173 aa4.29□□□□□ -1.72
LINC01961-201ENST00000449954 C5orf38Q86SI9 138 aa4.29□□□□□ -1.72
LINC01961-201ENST00000449954 ORAOV1Q8WV07 137 aa4.29□□□□□ -1.72
LINC01961-201ENST00000449954 MRAP2Q96G30 205 aa4.29□□□□□ -1.72
LINC01961-201ENST00000449954 TP73-AS1Q9UF72 201 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms