RNA–Protein interactions for RNA: ENST00000448572.1

SSBP3-209, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 454 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-209ENST00000448572 CAMK2N2Q96S95 79 aa6.36□□□□□ -1.39
SSBP3-209ENST00000448572 IGLV1-50A0A075B6I6 118 aa6.35□□□□□ -1.39
SSBP3-209ENST00000448572 F8WDY8 70 aa6.35□□□□□ -1.39
SSBP3-209ENST00000448572 COX7A2LO14548 114 aa6.35□□□□□ -1.39
SSBP3-209ENST00000448572 RPL13AP40429 203 aaKnown RBP6.35□□□□□ -1.39
SSBP3-209ENST00000448572 MEF2BQ02080 365 aaPredicted RBP6.35□□□□□ -1.39
SSBP3-209ENST00000448572 C1orf137Q5JT78 98 aa6.35□□□□□ -1.39
SSBP3-209ENST00000448572 Q6ZNX1 250 aa6.35□□□□□ -1.39
SSBP3-209ENST00000448572 MRPL52Q86TS9 123 aaKnown RBP6.35□□□□□ -1.39
SSBP3-209ENST00000448572 C2orf48Q96LS8 159 aa6.35□□□□□ -1.39
SSBP3-209ENST00000448572 UBE2D1P51668 147 aa6.34□□□□□ -1.39
SSBP3-209ENST00000448572 RPP21Q9H633 154 aaKnown RBP6.34□□□□□ -1.39
SSBP3-209ENST00000448572 ST20Q9HBF5 79 aa6.34□□□□□ -1.39
SSBP3-209ENST00000448572 MED9Q9NWA0 146 aa6.34□□□□□ -1.39
SSBP3-209ENST00000448572 TRBV6-5A0A0K0K1A5 114 aa6.33□□□□□ -1.4
SSBP3-209ENST00000448572 C7orf77A4D0Y5 90 aa6.33□□□□□ -1.4
SSBP3-209ENST00000448572 HMSDA8MTL9 139 aa6.33□□□□□ -1.4
SSBP3-209ENST00000448572 BCL2L11O43521 198 aa6.33□□□□□ -1.4
SSBP3-209ENST00000448572 PPP1R17O96001 155 aa6.33□□□□□ -1.4
SSBP3-209ENST00000448572 RPL18AQ02543 176 aaKnown RBP6.33□□□□□ -1.4
SSBP3-209ENST00000448572 RNF151Q2KHN1 245 aa6.33□□□□□ -1.4
SSBP3-209ENST00000448572 C9orf116Q5BN46 136 aaPredicted RBP6.33□□□□□ -1.4
SSBP3-209ENST00000448572 TMEM18Q96B42 140 aa6.33□□□□□ -1.4
SSBP3-209ENST00000448572 IMMP2LQ96T52 175 aa6.33□□□□□ -1.4
SSBP3-209ENST00000448572 ESDP10768 282 aa6.32□□□□□ -1.4
SSBP3-209ENST00000448572 NUP35Q8NFH5 326 aa6.32□□□□□ -1.4
SSBP3-209ENST00000448572 NUDT10Q8NFP7 164 aa6.32□□□□□ -1.4
SSBP3-209ENST00000448572 LINC00526Q96FQ7 95 aa6.32□□□□□ -1.4
SSBP3-209ENST00000448572 NUDT11Q96G61 164 aa6.32□□□□□ -1.4
SSBP3-209ENST00000448572 CDC42SE2Q9NRR3 84 aa6.32□□□□□ -1.4
SSBP3-209ENST00000448572 RAB19A4D1S5 217 aa6.31□□□□□ -1.4
SSBP3-209ENST00000448572 A8MWL6 223 aa6.31□□□□□ -1.4
SSBP3-209ENST00000448572 H0Y9J4 135 aa6.31□□□□□ -1.4
SSBP3-209ENST00000448572 IGLV7-43P04211 117 aa6.31□□□□□ -1.4
SSBP3-209ENST00000448572 FCER1GP30273 86 aa6.31□□□□□ -1.4
SSBP3-209ENST00000448572 OR10D4PQ8NGN7 298 aa6.31□□□□□ -1.4
SSBP3-209ENST00000448572 RPL39LQ96EH5 51 aaKnown RBP6.31□□□□□ -1.4
SSBP3-209ENST00000448572 BATF3Q9NR55 127 aa6.31□□□□□ -1.4
SSBP3-209ENST00000448572 CSDC2Q9Y534 153 aaKnown RBP6.31□□□□□ -1.4
SSBP3-209ENST00000448572 A0A087WZ39 114 aa6.3□□□□□ -1.4
SSBP3-209ENST00000448572 G3V3Q6 166 aa6.3□□□□□ -1.4
SSBP3-209ENST00000448572 TCAPO15273 167 aa6.3□□□□□ -1.4
SSBP3-209ENST00000448572 BCL2P10415 239 aa6.3□□□□□ -1.4
SSBP3-209ENST00000448572 PRR4Q16378 134 aa6.3□□□□□ -1.4
SSBP3-209ENST00000448572 KIR2DL4Q99706 377 aa6.3□□□□□ -1.4
SSBP3-209ENST00000448572 TRBV27A0A0K0K1C4 114 aa6.29□□□□□ -1.4
SSBP3-209ENST00000448572 A0A1W2PNN7 141 aa6.29□□□□□ -1.4
SSBP3-209ENST00000448572 VCYO14598 125 aa6.29□□□□□ -1.4
SSBP3-209ENST00000448572 TMEM241Q24JQ0 296 aa6.29□□□□□ -1.4
SSBP3-209ENST00000448572 PRR26Q8N8Z3 221 aa6.29□□□□□ -1.4
SSBP3-209ENST00000448572 TMEM242Q9NWH2 141 aa6.29□□□□□ -1.4
SSBP3-209ENST00000448572 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.28□□□□□ -1.4
SSBP3-209ENST00000448572 NDUFA1O15239 70 aa6.28□□□□□ -1.4
SSBP3-209ENST00000448572 GATCO43716 136 aaKnown RBP6.28□□□□□ -1.4
SSBP3-209ENST00000448572 TSHBP01222 138 aa6.28□□□□□ -1.4
SSBP3-209ENST00000448572 SPAG11BQ08648 103 aa6.28□□□□□ -1.4
SSBP3-209ENST00000448572 RGS21Q2M5E4 152 aa6.28□□□□□ -1.4
SSBP3-209ENST00000448572 CT83Q5H943 113 aa6.28□□□□□ -1.4
SSBP3-209ENST00000448572 MRPL35Q9NZE8 188 aaKnown RBP6.28□□□□□ -1.4
SSBP3-209ENST00000448572 CARHSP1Q9Y2V2 147 aaKnown RBP6.28□□□□□ -1.4
SSBP3-209ENST00000448572 TRBV20OR9-2A0A075B6H5 130 aa6.27□□□□□ -1.41
SSBP3-209ENST00000448572 TRAV13-1A0A0B4J241 112 aa6.27□□□□□ -1.41
SSBP3-209ENST00000448572 PPP1R2P9O14990 202 aa6.27□□□□□ -1.41
SSBP3-209ENST00000448572 UBE2BP63146 152 aa6.27□□□□□ -1.41
SSBP3-209ENST00000448572 PHF5AQ7RTV0 110 aaKnown RBP6.27□□□□□ -1.41
SSBP3-209ENST00000448572 RNASE7Q9H1E1 156 aaKnown RBP6.27□□□□□ -1.41
SSBP3-209ENST00000448572 A0A1B0GUT8 65 aa6.26□□□□□ -1.41
SSBP3-209ENST00000448572 POLR2KP53803 58 aaKnown RBP6.26□□□□□ -1.41
SSBP3-209ENST00000448572 FAM231DQ6ZW35 169 aa6.26□□□□□ -1.41
SSBP3-209ENST00000448572 TIMM21Q9BVV7 248 aa6.26□□□□□ -1.41
SSBP3-209ENST00000448572 TMEM191AQ9H0A3 160 aa6.26□□□□□ -1.41
SSBP3-209ENST00000448572 TLX1NBP0CAT3 122 aa6.25□□□□□ -1.41
SSBP3-209ENST00000448572 FOXA3P55318 350 aaPredicted RBP6.25□□□□□ -1.41
SSBP3-209ENST00000448572 TMEM250H0YL14 139 aa6.24□□□□□ -1.41
SSBP3-209ENST00000448572 C5orf38Q86SI9 138 aa6.24□□□□□ -1.41
SSBP3-209ENST00000448572 OCC1Q8TAD7 63 aa6.24□□□□□ -1.41
SSBP3-209ENST00000448572 ORAOV1Q8WV07 137 aa6.24□□□□□ -1.41
SSBP3-209ENST00000448572 UBE2D4Q9Y2X8 147 aa6.24□□□□□ -1.41
SSBP3-209ENST00000448572 SMLR1H3BR10 107 aa6.23□□□□□ -1.41
SSBP3-209ENST00000448572 SUMO2P61956 95 aaKnown RBP6.23□□□□□ -1.41
SSBP3-209ENST00000448572 OPRPNQ99935 248 aaPredicted RBP6.23□□□□□ -1.41
SSBP3-209ENST00000448572 KRTAP9-2Q9BYQ4 174 aa6.23□□□□□ -1.41
SSBP3-209ENST00000448572 TGIF2-C20orf24A0A0A6YYL0 155 aa6.22□□□□□ -1.41
SSBP3-209ENST00000448572 HIGD1CA8MV81 97 aa6.22□□□□□ -1.41
SSBP3-209ENST00000448572 K7EN84 100 aa6.22□□□□□ -1.41
SSBP3-209ENST00000448572 M0QXV9 152 aa6.22□□□□□ -1.41
SSBP3-209ENST00000448572 RAB4AP20338 218 aa6.22□□□□□ -1.41
SSBP3-209ENST00000448572 RIGQ13278 110 aa6.22□□□□□ -1.41
SSBP3-209ENST00000448572 FAM19A5Q7Z5A7 132 aaPredicted RBP6.22□□□□□ -1.41
SSBP3-209ENST00000448572 PACRGQ96M98 296 aaPredicted RBP6.22□□□□□ -1.41
SSBP3-209ENST00000448572 SPANXA1Q9NS26 97 aa6.22□□□□□ -1.41
SSBP3-209ENST00000448572 TRBV30A0A0K0K1B3 111 aa6.21□□□□□ -1.42
SSBP3-209ENST00000448572 LINC00862A6NCI5 91 aa6.21□□□□□ -1.42
SSBP3-209ENST00000448572 NUPR1O60356 82 aa6.21□□□□□ -1.42
SSBP3-209ENST00000448572 C20orf78Q9BR46 151 aa6.21□□□□□ -1.42
SSBP3-209ENST00000448572 SMDT1Q9H4I9 107 aa6.21□□□□□ -1.42
SSBP3-209ENST00000448572 HBBP68871 147 aa6.2□□□□□ -1.42
SSBP3-209ENST00000448572 GAGE2EQ4V326 116 aa6.2□□□□□ -1.42
SSBP3-209ENST00000448572 LBHQ53QV2 105 aaPredicted RBP6.2□□□□□ -1.42
SSBP3-209ENST00000448572 SLC51BQ86UW2 128 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms