RNA–Protein interactions for RNA: ENST00000446182.5

PTPRN-208, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 5

Gene PTPRN, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-208ENST00000446182 TPPP3Q9BW30 176 aa6.6□□□□□ -1.35
PTPRN-208ENST00000446182 TGIF2-C20orf24A0A0A6YYL0 155 aa6.59□□□□□ -1.35
PTPRN-208ENST00000446182 S100A2P29034 98 aa6.59□□□□□ -1.35
PTPRN-208ENST00000446182 S100A12P80511 92 aa6.59□□□□□ -1.35
PTPRN-208ENST00000446182 COX6A2Q02221 97 aa6.59□□□□□ -1.35
PTPRN-208ENST00000446182 COA6Q5JTJ3 125 aaKnown RBP6.59□□□□□ -1.35
PTPRN-208ENST00000446182 OCC1Q8TAD7 63 aa6.59□□□□□ -1.35
PTPRN-208ENST00000446182 PGLYRP4Q96LB8 373 aa6.59□□□□□ -1.35
PTPRN-208ENST00000446182 LINC01600Q96MT4 127 aa6.59□□□□□ -1.35
PTPRN-208ENST00000446182 MUC2Q02817 5179 aa6.58□□□□□ -1.36
PTPRN-208ENST00000446182 GAGE12HA6NDE8 117 aa6.58□□□□□ -1.36
PTPRN-208ENST00000446182 K7EN84 100 aa6.58□□□□□ -1.36
PTPRN-208ENST00000446182 RPS20P60866 119 aaKnown RBP6.58□□□□□ -1.36
PTPRN-208ENST00000446182 SNRPEP62304 92 aaKnown RBP6.58□□□□□ -1.36
PTPRN-208ENST00000446182 CACNG7P62955 275 aa6.58□□□□□ -1.36
PTPRN-208ENST00000446182 PRR3P79522 188 aaKnown RBP6.58□□□□□ -1.36
PTPRN-208ENST00000446182 FABP9Q0Z7S8 132 aa6.58□□□□□ -1.36
PTPRN-208ENST00000446182 ODF1Q14990 250 aa6.58□□□□□ -1.36
PTPRN-208ENST00000446182 OR2D3Q8NGH3 330 aa6.58□□□□□ -1.36
PTPRN-208ENST00000446182 DPH3P1Q9H4G8 78 aa6.58□□□□□ -1.36
PTPRN-208ENST00000446182 C19orf71A6NCJ1 209 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 UBE2L6O14933 153 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 TRGC2P03986 189 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 AMTP48728 403 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 COTL1Q14019 142 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 MAJINQ3KP22 176 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 HIGD2BQ4VC39 106 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 CFAP161Q6P656 301 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 ATP5L2Q7Z4Y8 100 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 LINC00518Q8N0U6 118 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 PRSS3P2Q8NHM4 247 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 GNB1LQ9BYB4 327 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 NIT2Q9NQR4 276 aa6.57□□□□□ -1.36
PTPRN-208ENST00000446182 IGKV2-24A0A0C4DH68 120 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 A0A1B0GW15 77 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 SMIM27A0A1W2PRY6 76 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST1H2BKO60814 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST1H2BJP06899 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 TRGC1P0CF51 173 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST1H2BOP23527 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST1H2BBP33778 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 AKR1D1P51857 326 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST1H2BDP58876 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST1H2BCP62807 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST2H2BEQ16778 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST2H2BFQ5QNW6 126 aaPredicted RBP6.56□□□□□ -1.36
PTPRN-208ENST00000446182 GTSF1Q8WW33 167 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST1H2BHQ93079 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 PACRGQ96M98 296 aaPredicted RBP6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST1H2BNQ99877 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 HIST1H2BMQ99879 126 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 NAT8BQ9UHF3 227 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 TRAPPC1Q9Y5R8 145 aa6.56□□□□□ -1.36
PTPRN-208ENST00000446182 FAT4Q6V0I7 4981 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 GVQW2A0A096LPI5 108 aaPredicted RBP6.55□□□□□ -1.36
PTPRN-208ENST00000446182 IGKV3OR2-268A0A0C4DH90 116 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 A0A0J9YXV3 536 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 XKRY2A2RUG3 117 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 A8MWL6 223 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 F2Z2F3 143 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 LYZL1Q6UWQ5 148 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 STPG4Q8N801 248 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 TSKUQ8WUA8 353 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 V9GYV3 84 aa6.55□□□□□ -1.36
PTPRN-208ENST00000446182 A0A096LNI7 61 aa6.54□□□□□ -1.36
PTPRN-208ENST00000446182 GATCO43716 136 aaKnown RBP6.54□□□□□ -1.36
PTPRN-208ENST00000446182 NTF3P20783 257 aa6.54□□□□□ -1.36
PTPRN-208ENST00000446182 NDUFA6P56556 154 aa6.54□□□□□ -1.36
PTPRN-208ENST00000446182 KRTAP10-8P60410 259 aa6.54□□□□□ -1.36
PTPRN-208ENST00000446182 CHCHD10Q8WYQ3 142 aaPredicted RBP6.54□□□□□ -1.36
PTPRN-208ENST00000446182 CTRLP40313 264 aa6.53□□□□□ -1.36
PTPRN-208ENST00000446182 FOXI1Q12951 378 aa6.53□□□□□ -1.36
PTPRN-208ENST00000446182 GATD1Q8NB37 220 aa6.53□□□□□ -1.36
PTPRN-208ENST00000446182 TMEM18Q96B42 140 aa6.53□□□□□ -1.36
PTPRN-208ENST00000446182 TRAV26-2A0A0B4J265 109 aa6.52□□□□□ -1.37
PTPRN-208ENST00000446182 FOXA3P55318 350 aaPredicted RBP6.52□□□□□ -1.37
PTPRN-208ENST00000446182 AMMECR1LQ6DCA0 310 aa6.52□□□□□ -1.37
PTPRN-208ENST00000446182 SPINK6Q6UWN8 80 aa6.52□□□□□ -1.37
PTPRN-208ENST00000446182 HIST3H2BBQ8N257 126 aa6.52□□□□□ -1.37
PTPRN-208ENST00000446182 C12orf57Q99622 126 aa6.52□□□□□ -1.37
PTPRN-208ENST00000446182 CNFNQ9BYD5 112 aa6.52□□□□□ -1.37
PTPRN-208ENST00000446182 RPP21Q9H633 154 aaKnown RBP6.52□□□□□ -1.37
PTPRN-208ENST00000446182 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.51□□□□□ -1.37
PTPRN-208ENST00000446182 IGKV2-29A2NJV5 120 aaPredicted RBP6.51□□□□□ -1.37
PTPRN-208ENST00000446182 NCR2O95944 276 aa6.51□□□□□ -1.37
PTPRN-208ENST00000446182 ESDP10768 282 aa6.51□□□□□ -1.37
PTPRN-208ENST00000446182 SRSF9Q13242 221 aaKnown RBP eCLIP6.51□□□□□ -1.37
PTPRN-208ENST00000446182 RNASEKQ6P5S7 137 aaKnown RBP6.51□□□□□ -1.37
PTPRN-208ENST00000446182 REG3GQ6UW15 175 aa6.51□□□□□ -1.37
PTPRN-208ENST00000446182 BORCS7Q96B45 105 aa6.51□□□□□ -1.37
PTPRN-208ENST00000446182 RPL39LQ96EH5 51 aaKnown RBP6.51□□□□□ -1.37
PTPRN-208ENST00000446182 IFITM10A6NMD0 228 aa6.5□□□□□ -1.37
PTPRN-208ENST00000446182 H7C423 109 aa6.5□□□□□ -1.37
PTPRN-208ENST00000446182 FGF6P10767 208 aa6.5□□□□□ -1.37
PTPRN-208ENST00000446182 RAB4AP20338 218 aa6.5□□□□□ -1.37
PTPRN-208ENST00000446182 TWIST1Q15672 202 aa6.5□□□□□ -1.37
PTPRN-208ENST00000446182 NUDT10Q8NFP7 164 aa6.5□□□□□ -1.37
PTPRN-208ENST00000446182 NUDT11Q96G61 164 aa6.5□□□□□ -1.37
PTPRN-208ENST00000446182 MRPL18Q9H0U6 180 aaKnown RBP6.5□□□□□ -1.37
PTPRN-208ENST00000446182 RNASE7Q9H1E1 156 aaKnown RBP6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms