RNA–Protein interactions for RNA: ENST00000443677.6

RNF135-204, Transcript of ring finger protein 135, humanhuman

TSL 1 (best) BASIC

Gene RNF135, Length 1,261 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135-204ENST00000443677 PRSS47A8MTI9 375 aa13□□□□□ -0.33
RNF135-204ENST00000443677 SNAPINO95295 136 aa13□□□□□ -0.33
RNF135-204ENST00000443677 KRTAP26-1Q6PEX3 210 aa13□□□□□ -0.33
RNF135-204ENST00000443677 MRPL52Q86TS9 123 aaKnown RBP13□□□□□ -0.33
RNF135-204ENST00000443677 SVBPQ8N300 66 aa13□□□□□ -0.33
RNF135-204ENST00000443677 IGLV10-54A0A075B6I4 117 aa12.99□□□□□ -0.33
RNF135-204ENST00000443677 OR5A1Q8NGJ0 315 aa12.99□□□□□ -0.33
RNF135-204ENST00000443677 NTN5Q8WTR8 489 aaPredicted RBP12.99□□□□□ -0.33
RNF135-204ENST00000443677 TMEM18Q96B42 140 aa12.98□□□□□ -0.33
RNF135-204ENST00000443677 GNB1LQ9BYB4 327 aa12.98□□□□□ -0.33
RNF135-204ENST00000443677 EPM2AB3EWF7 344 aa12.97□□□□□ -0.33
RNF135-204ENST00000443677 XGP55808 180 aa12.97□□□□□ -0.33
RNF135-204ENST00000443677 KRTAP10-1P60331 282 aa12.97□□□□□ -0.33
RNF135-204ENST00000443677 SMAGPQ0VAQ4 97 aa12.97□□□□□ -0.33
RNF135-204ENST00000443677 COX19Q49B96 90 aa12.97□□□□□ -0.33
RNF135-204ENST00000443677 MAP1LC3AQ9H492 121 aa12.97□□□□□ -0.33
RNF135-204ENST00000443677 CDC42SE2Q9NRR3 84 aa12.97□□□□□ -0.33
RNF135-204ENST00000443677 IGLV5-52A0A0A0MRZ9 124 aa12.96□□□□□ -0.33
RNF135-204ENST00000443677 IGKV3OR2-268A0A0C4DH90 116 aa12.96□□□□□ -0.33
RNF135-204ENST00000443677 LOC389332A0A1B0GUA5 103 aa12.96□□□□□ -0.33
RNF135-204ENST00000443677 HLA-DQA1P01909 254 aa12.96□□□□□ -0.33
RNF135-204ENST00000443677 RAB5AP20339 215 aa12.96□□□□□ -0.33
RNF135-204ENST00000443677 GCSHP23434 173 aa12.96□□□□□ -0.33
RNF135-204ENST00000443677 DGAT2L7PQ6IED9 249 aa12.96□□□□□ -0.33
RNF135-204ENST00000443677 CSDC2Q9Y534 153 aaKnown RBP12.96□□□□□ -0.33
RNF135-204ENST00000443677 ZNF664Q8N3J9 261 aa12.95□□□□□ -0.34
RNF135-204ENST00000443677 UBE2D4Q9Y2X8 147 aa12.95□□□□□ -0.34
RNF135-204ENST00000443677 KIAA1644Q3SXP7 199 aa12.94□□□□□ -0.34
RNF135-204ENST00000443677 SLC7A5P1Q8MH63 180 aa12.94□□□□□ -0.34
RNF135-204ENST00000443677 TIMM21Q9BVV7 248 aa12.94□□□□□ -0.34
RNF135-204ENST00000443677 USP17L23D6RBM5 183 aa12.93□□□□□ -0.34
RNF135-204ENST00000443677 C14orf177Q52M58 125 aa12.93□□□□□ -0.34
RNF135-204ENST00000443677 Q8N8P6 123 aa12.93□□□□□ -0.34
RNF135-204ENST00000443677 IGLV2-33A0A075B6J2 118 aaPredicted RBP12.92□□□□□ -0.34
RNF135-204ENST00000443677 MT-ND6P03923 174 aa12.92□□□□□ -0.34
RNF135-204ENST00000443677 TGIF2-C20orf24A0A0A6YYL0 155 aa12.91□□□□□ -0.34
RNF135-204ENST00000443677 LINC00959A0A1B0GUT2 108 aa12.91□□□□□ -0.34
RNF135-204ENST00000443677 RPL39P62891 51 aaKnown RBP12.91□□□□□ -0.34
RNF135-204ENST00000443677 CHCHD10Q8WYQ3 142 aaPredicted RBP12.91□□□□□ -0.34
RNF135-204ENST00000443677 GAGE12HA6NDE8 117 aa12.9□□□□□ -0.34
RNF135-204ENST00000443677 MRPL18Q9H0U6 180 aaKnown RBP12.9□□□□□ -0.34
RNF135-204ENST00000443677 NXT2Q9NPJ8 142 aaKnown RBP12.9□□□□□ -0.34
RNF135-204ENST00000443677 SPANXA1Q9NS26 97 aa12.89□□□□□ -0.35
RNF135-204ENST00000443677 K7EMI3 77 aa12.88□□□□□ -0.35
RNF135-204ENST00000443677 FABP9Q0Z7S8 132 aa12.88□□□□□ -0.35
RNF135-204ENST00000443677 SS18Q15532 418 aa12.88□□□□□ -0.35
RNF135-204ENST00000443677 ALKBH7Q9BT30 221 aaPredicted RBP12.88□□□□□ -0.35
RNF135-204ENST00000443677 PRSS1P07477 247 aa12.87□□□□□ -0.35
RNF135-204ENST00000443677 IFI27P40305 119 aaPredicted RBP12.87□□□□□ -0.35
RNF135-204ENST00000443677 CCL25O15444 150 aa12.86□□□□□ -0.35
RNF135-204ENST00000443677 INAFM2P0DMQ5 153 aa12.86□□□□□ -0.35
RNF135-204ENST00000443677 MRPS36P82909 103 aaKnown RBP12.86□□□□□ -0.35
RNF135-204ENST00000443677 ORMDL2Q53FV1 153 aa12.86□□□□□ -0.35
RNF135-204ENST00000443677 RNASE13Q5GAN3 156 aaKnown RBP12.86□□□□□ -0.35
RNF135-204ENST00000443677 Q5VSD8 79 aa12.86□□□□□ -0.35
RNF135-204ENST00000443677 Q6ZUT4 128 aa12.86□□□□□ -0.35
RNF135-204ENST00000443677 SMR3BP02814 79 aaPredicted RBP12.85□□□□□ -0.35
RNF135-204ENST00000443677 XCL1P47992 114 aa12.85□□□□□ -0.35
RNF135-204ENST00000443677 FOXI1Q12951 378 aa12.85□□□□□ -0.35
RNF135-204ENST00000443677 FAM104AQ969W3 186 aa12.85□□□□□ -0.35
RNF135-204ENST00000443677 PYGO1Q9Y3Y4 419 aa12.85□□□□□ -0.35
RNF135-204ENST00000443677 TRAPPC1Q9Y5R8 145 aa12.85□□□□□ -0.35
RNF135-204ENST00000443677 C1orf196B1AJZ1 125 aa12.84□□□□□ -0.35
RNF135-204ENST00000443677 CFAP161Q6P656 301 aa12.84□□□□□ -0.35
RNF135-204ENST00000443677 PRSS3P2Q8NHM4 247 aa12.84□□□□□ -0.35
RNF135-204ENST00000443677 YPEL4Q96NS1 127 aa12.84□□□□□ -0.35
RNF135-204ENST00000443677 OPRPNQ99935 248 aaPredicted RBP12.84□□□□□ -0.35
RNF135-204ENST00000443677 CD164L2Q6UWJ8 174 aa12.83□□□□□ -0.36
RNF135-204ENST00000443677 C2orf66Q6UXQ4 117 aa12.83□□□□□ -0.36
RNF135-204ENST00000443677 CYSLTR1Q9Y271 337 aa12.83□□□□□ -0.36
RNF135-204ENST00000443677 TRAV13-1A0A0B4J241 112 aa12.82□□□□□ -0.36
RNF135-204ENST00000443677 G0S2P27469 103 aa12.82□□□□□ -0.36
RNF135-204ENST00000443677 hDV102S1A0JD36 115 aa12.81□□□□□ -0.36
RNF135-204ENST00000443677 FAM229AH3BQW9 127 aa12.81□□□□□ -0.36
RNF135-204ENST00000443677 LINC01620Q4KN68 170 aa12.81□□□□□ -0.36
RNF135-204ENST00000443677 C15orf56Q8N910 161 aa12.81□□□□□ -0.36
RNF135-204ENST00000443677 SMCO4Q9NRQ5 59 aa12.81□□□□□ -0.36
RNF135-204ENST00000443677 FAT1Q14517 4588 aa12.8□□□□□ -0.36
RNF135-204ENST00000443677 HAMPP81172 84 aa12.8□□□□□ -0.36
RNF135-204ENST00000443677 IGLV4-3A0A075B6K6 122 aa12.79□□□□□ -0.36
RNF135-204ENST00000443677 LINC01546A6NGU7 62 aa12.79□□□□□ -0.36
RNF135-204ENST00000443677 CBLN2Q8IUK8 224 aa12.79□□□□□ -0.36
RNF135-204ENST00000443677 AP5S1Q9NUS5 200 aa12.79□□□□□ -0.36
RNF135-204ENST00000443677 CNBPP62633 177 aaKnown RBP12.78□□□□□ -0.36
RNF135-204ENST00000443677 TMEM141Q96I45 108 aa12.78□□□□□ -0.36
RNF135-204ENST00000443677 FAM30AQ9NZY2 134 aa12.78□□□□□ -0.36
RNF135-204ENST00000443677 IGIPA6NJ69 53 aa12.77□□□□□ -0.37
RNF135-204ENST00000443677 IFITM10A6NMD0 228 aa12.77□□□□□ -0.37
RNF135-204ENST00000443677 NPSP0C0P6 89 aa12.77□□□□□ -0.37
RNF135-204ENST00000443677 C9orf163Q8N9P6 203 aa12.77□□□□□ -0.37
RNF135-204ENST00000443677 IGHV1-58A0A0C4DH39 117 aa12.76□□□□□ -0.37
RNF135-204ENST00000443677 SLPIP03973 132 aa12.76□□□□□ -0.37
RNF135-204ENST00000443677 HIGD2BQ4VC39 106 aa12.76□□□□□ -0.37
RNF135-204ENST00000443677 FA2HQ7L5A8 372 aa12.76□□□□□ -0.37
RNF135-204ENST00000443677 TOMM6Q96B49 74 aa12.76□□□□□ -0.37
RNF135-204ENST00000443677 DNAH8Q96JB1 4490 aa12.76□□□□□ -0.37
RNF135-204ENST00000443677 SRRM2Q9UQ35 2752 aaKnown RBP12.75□□□□□ -0.37
RNF135-204ENST00000443677 GVQW2A0A096LPI5 108 aaPredicted RBP12.75□□□□□ -0.37
RNF135-204ENST00000443677 COX7A2LO14548 114 aa12.75□□□□□ -0.37
RNF135-204ENST00000443677 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms