RNA–Protein interactions for RNA: ENST00000440664.5

LINC01549-201, Transcript of long intergenic non-protein coding RNA 1549, humanhuman

TSL 3 BASIC

Gene LINC01549, Length 714 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01549-201ENST00000440664 KRTAP10-4P60372 401 aaPredicted RBP0.68□□□□□ -2.3
LINC01549-201ENST00000440664 ROMO1P60602 79 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 SNRPFP62306 86 aaKnown RBP0.68□□□□□ -2.3
LINC01549-201ENST00000440664 CIRBPQ14011 172 aaKnown RBP0.68□□□□□ -2.3
LINC01549-201ENST00000440664 DEFB135Q30KP9 77 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 C1orf134Q5TEV5 83 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 C3orf33Q6P1S2 294 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 LINC00575Q6W349 94 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 ANGPTL5Q86XS5 388 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 FAM24BQ8N5W8 94 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 OR4K15Q8NH41 348 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 STAG3L4Q8TBR4 150 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 OBSCN-AS1Q96MR7 158 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 CACYBPQ9HB71 228 aaKnown RBP0.68□□□□□ -2.3
LINC01549-201ENST00000440664 HILPDAQ9Y5L2 63 aa0.68□□□□□ -2.3
LINC01549-201ENST00000440664 TNCP24821 2201 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 A0A1B0GV72 72 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 PVALEFA0A1B0GWK0 134 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 A0A1W2PPM0 123 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 NCR3O14931 201 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 IDO1P14902 403 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 CCL3L1P16619 93 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 GLRXP35754 106 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 CNBPP62633 177 aaKnown RBP0.67□□□□□ -2.3
LINC01549-201ENST00000440664 RTL8BQ17RB0 113 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 C1orf140Q5VVS0 124 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 SCIMPQ6UWF3 145 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 LINC00299Q6ZSB3 139 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 SMIM15Q7Z3B0 74 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 UBE2DNLQ8IWF7 75 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 Q8IYB0 196 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 SMIM20Q8N5G0 67 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 FAM216BQ8N7L0 139 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 OR4B1Q8NGF8 309 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 C10orf82Q8WW14 230 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 CHCHD1Q96BP2 118 aaKnown RBP0.67□□□□□ -2.3
LINC01549-201ENST00000440664 HYLS1Q96M11 299 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 HOPXQ9BPY8 73 aaPredicted RBP0.67□□□□□ -2.3
LINC01549-201ENST00000440664 WFDC6Q9BQY6 131 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 TMEM138Q9NPI0 162 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 LAMTOR2Q9Y2Q5 125 aa0.67□□□□□ -2.3
LINC01549-201ENST00000440664 A0A096LPI6 279 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 TMEM238C9JI98 176 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 RER1O15258 196 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 CD2P06729 351 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 PIPP12273 146 aaPredicted RBP0.66□□□□□ -2.3
LINC01549-201ENST00000440664 HTN3P15516 51 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 KDELR1P24390 212 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 SRP9P49458 86 aaKnown RBP0.66□□□□□ -2.3
LINC01549-201ENST00000440664 NDUFA6P56556 154 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 OR2T2Q6IF00 324 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 ZCCHC23Q6ZST2 131 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 RPS27LQ71UM5 84 aaKnown RBP0.66□□□□□ -2.3
LINC01549-201ENST00000440664 DEFB104AQ8WTQ1 72 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 RAB37Q96AX2 223 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 GPX7Q96SL4 187 aaPredicted RBP0.66□□□□□ -2.3
LINC01549-201ENST00000440664 CCDC32Q9BV29 185 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 PCBD2Q9H0N5 130 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 TAS2R7Q9NYW3 318 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 RNF11Q9Y3C5 154 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 ASB4Q9Y574 426 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 NUBP2Q9Y5Y2 271 aa0.66□□□□□ -2.3
LINC01549-201ENST00000440664 FLGP20930 4061 aaPredicted RBP0.65□□□□□ -2.3
LINC01549-201ENST00000440664 ODAMA1E959 279 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 C5orf58C9J3I9 102 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 G3V318 75 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 PGRMC1O00264 195 aaKnown RBP0.65□□□□□ -2.31
LINC01549-201ENST00000440664 CCL25O15444 150 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 IGLV3-1P01715 115 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 MT-ND6P03923 174 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 FABP1P07148 127 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 ZNF25P17030 456 aaPredicted RBP0.65□□□□□ -2.31
LINC01549-201ENST00000440664 S100GP29377 79 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 TMBIM6P55061 237 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 FXYD6P3P58550 94 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 LSM3P62310 102 aaKnown RBP0.65□□□□□ -2.31
LINC01549-201ENST00000440664 HBBP68871 147 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 MRPS36P82909 103 aaKnown RBP0.65□□□□□ -2.31
LINC01549-201ENST00000440664 SARNPP82979 210 aaKnown RBP0.65□□□□□ -2.31
LINC01549-201ENST00000440664 DIAPH2-AS1Q14236 149 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 OR8B8Q15620 311 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 PATE2Q6UY27 113 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 PHF5AQ7RTV0 110 aaKnown RBP0.65□□□□□ -2.31
LINC01549-201ENST00000440664 GRPEL2Q8TAA5 225 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 BORCS8Q96FH0 119 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 AP1S3Q96PC3 154 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 AIF1LQ9BQI0 150 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 C19orf12Q9NSK7 152 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 UFC1Q9Y3C8 167 aa0.65□□□□□ -2.31
LINC01549-201ENST00000440664 DEFB131BA0A096LNP1 70 aa0.64□□□□□ -2.31
LINC01549-201ENST00000440664 NBDYA0A0U1RRE5 68 aa0.64□□□□□ -2.31
LINC01549-201ENST00000440664 JMJD7-PLA2G4BH0Y9G9 81 aa0.64□□□□□ -2.31
LINC01549-201ENST00000440664 K7ERJ3 54 aa0.64□□□□□ -2.31
LINC01549-201ENST00000440664 KPNA4O00629 521 aaPredicted RBP0.64□□□□□ -2.31
LINC01549-201ENST00000440664 IGLV1-51P01701 117 aa0.64□□□□□ -2.31
LINC01549-201ENST00000440664 CXCL1P09341 107 aa0.64□□□□□ -2.31
LINC01549-201ENST00000440664 MPC1LP0DKB6 136 aa0.64□□□□□ -2.31
LINC01549-201ENST00000440664 FABP2P12104 132 aa0.64□□□□□ -2.31
LINC01549-201ENST00000440664 MSMO1Q15800 293 aa0.64□□□□□ -2.31
LINC01549-201ENST00000440664 SPATA45Q537H7 98 aa0.64□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms